RNA–Protein interactions for RNA: ENST00000522353.2

PCDHA3-201, Transcript of protocadherin alpha 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCDHA3, Length 5,260 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA3-201ENST00000522353 PODNQ7Z5L7 613 aa17.81■□□□□ 0.44
PCDHA3-201ENST00000522353 LARP4BQ92615 738 aaKnown RBP17.81■□□□□ 0.44
PCDHA3-201ENST00000522353 ATP2A3Q93084 1043 aa17.81■□□□□ 0.44
PCDHA3-201ENST00000522353 RRAGDQ9NQL2 400 aaPredicted RBP17.81■□□□□ 0.44
PCDHA3-201ENST00000522353 LMBRD1Q9NUN5 540 aa17.81■□□□□ 0.44
PCDHA3-201ENST00000522353 RIPOR2Q9Y4F9 1068 aa17.81■□□□□ 0.44
PCDHA3-201ENST00000522353 RPAP1Q9BWH6 1393 aaPredicted RBP17.81■□□□□ 0.44
PCDHA3-201ENST00000522353 SPATA31E1Q6ZUB1 1445 aa17.81■□□□□ 0.44
PCDHA3-201ENST00000522353 ADGRL3Q9HAR2 1447 aa17.81■□□□□ 0.44
PCDHA3-201ENST00000522353 PSDA5PKW4 1024 aaPredicted RBP17.81■□□□□ 0.44
PCDHA3-201ENST00000522353 VIMP08670 466 aaKnown RBP17.81■□□□□ 0.44
PCDHA3-201ENST00000522353 IFRD2Q12894 506 aaPredicted RBP17.81■□□□□ 0.44
PCDHA3-201ENST00000522353 PAK2Q13177 524 aa17.81■□□□□ 0.44
PCDHA3-201ENST00000522353 TMEM179Q6ZVK1 233 aa17.81■□□□□ 0.44
PCDHA3-201ENST00000522353 LCORLQ8N3X6 602 aa17.81■□□□□ 0.44
PCDHA3-201ENST00000522353 PTK2Q05397 1052 aa17.81■□□□□ 0.44
PCDHA3-201ENST00000522353 RNASELQ05823 741 aaKnown RBP17.81■□□□□ 0.44
PCDHA3-201ENST00000522353 KIAA1841Q6NSI8 718 aa17.81■□□□□ 0.44
PCDHA3-201ENST00000522353 MIGA2Q7L4E1 593 aa17.81■□□□□ 0.44
PCDHA3-201ENST00000522353 CEP170P1Q96L14 293 aa17.81■□□□□ 0.44
PCDHA3-201ENST00000522353 RAB17Q9H0T7 212 aa17.81■□□□□ 0.44
PCDHA3-201ENST00000522353 OSBPL3Q9H4L5 887 aa17.81■□□□□ 0.44
PCDHA3-201ENST00000522353 SLC39A2Q9NP94 309 aa17.81■□□□□ 0.44
PCDHA3-201ENST00000522353 TLR7Q9NYK1 1049 aaKnown RBP17.81■□□□□ 0.44
PCDHA3-201ENST00000522353 GADD45BO75293 160 aaPredicted RBP17.81■□□□□ 0.44
PCDHA3-201ENST00000522353 FMNL1O95466 1100 aaPredicted RBP17.81■□□□□ 0.44
PCDHA3-201ENST00000522353 KLHL7Q8IXQ5 586 aa17.81■□□□□ 0.44
PCDHA3-201ENST00000522353 AFAP1L1Q8TED9 768 aa17.81■□□□□ 0.44
PCDHA3-201ENST00000522353 ANKRD36BP1Q96IX9 119 aa17.81■□□□□ 0.44
PCDHA3-201ENST00000522353 CARD6Q9BX69 1037 aa17.81■□□□□ 0.44
PCDHA3-201ENST00000522353 ABCB4P21439 1286 aa17.8■□□□□ 0.44
PCDHA3-201ENST00000522353 UBXN2AP68543 259 aa17.8■□□□□ 0.44
PCDHA3-201ENST00000522353 PTPN12Q05209 780 aaKnown RBP17.8■□□□□ 0.44
PCDHA3-201ENST00000522353 NCAPD2Q15021 1401 aa17.8■□□□□ 0.44
PCDHA3-201ENST00000522353 SLC16A2P36021 539 aa17.8■□□□□ 0.44
PCDHA3-201ENST00000522353 PIK3CAP42336 1068 aa17.8■□□□□ 0.44
PCDHA3-201ENST00000522353 CACTINQ8WUQ7 758 aaKnown RBP17.8■□□□□ 0.44
PCDHA3-201ENST00000522353 SYMPKQ92797 1274 aaKnown RBP17.8■□□□□ 0.44
PCDHA3-201ENST00000522353 NT5C1BQ96P26 610 aa17.8■□□□□ 0.44
PCDHA3-201ENST00000522353 NSFP46459 744 aaKnown RBP17.8■□□□□ 0.44
PCDHA3-201ENST00000522353 MECOMQ03112 1051 aa17.8■□□□□ 0.44
PCDHA3-201ENST00000522353 FAM81BQ96LP2 452 aa17.8■□□□□ 0.44
PCDHA3-201ENST00000522353 PIGSQ96S52 555 aa17.8■□□□□ 0.44
PCDHA3-201ENST00000522353 LSG1Q9H089 658 aaKnown RBP17.8■□□□□ 0.44
PCDHA3-201ENST00000522353 MTMR6Q9Y217 621 aa17.8■□□□□ 0.44
PCDHA3-201ENST00000522353 NOC2LQ9Y3T9 749 aaKnown RBP17.8■□□□□ 0.44
PCDHA3-201ENST00000522353 IFNB1P01574 187 aa17.79■□□□□ 0.44
PCDHA3-201ENST00000522353 CYP21A2P08686 494 aa17.79■□□□□ 0.44
PCDHA3-201ENST00000522353 BSPRYQ5W0U4 402 aa17.79■□□□□ 0.44
PCDHA3-201ENST00000522353 B4GALNT4Q76KP1 1039 aa17.79■□□□□ 0.44
PCDHA3-201ENST00000522353 RSRC2Q7L4I2 434 aaKnown RBP17.79■□□□□ 0.44
PCDHA3-201ENST00000522353 TRIM58Q8NG06 486 aa17.79■□□□□ 0.44
PCDHA3-201ENST00000522353 RIC8AQ9NPQ8 531 aa17.79■□□□□ 0.44
PCDHA3-201ENST00000522353 KMT5AQ9NQR1 393 aa17.79■□□□□ 0.44
PCDHA3-201ENST00000522353 FBXO40Q9UH90 709 aa17.79■□□□□ 0.44
PCDHA3-201ENST00000522353 OVOS2A0A0G2JMS6 1433 aa17.79■□□□□ 0.44
PCDHA3-201ENST00000522353 OVOS2A0A0J9YW53 1432 aa17.79■□□□□ 0.44
PCDHA3-201ENST00000522353 MUM1L1Q5H9M0 696 aa17.79■□□□□ 0.44
PCDHA3-201ENST00000522353 RC3H1Q5TC82 1133 aaKnown RBP17.79■□□□□ 0.44
PCDHA3-201ENST00000522353 OVOS2Q6IE36 1432 aa17.79■□□□□ 0.44
PCDHA3-201ENST00000522353 PPFIBP2Q8ND30 876 aa17.79■□□□□ 0.44
PCDHA3-201ENST00000522353 RPGRIP1Q96KN7 1286 aa17.79■□□□□ 0.44
PCDHA3-201ENST00000522353 CDK12Q9NYV4 1490 aaPredicted RBP17.79■□□□□ 0.44
PCDHA3-201ENST00000522353 MTMR3Q13615 1198 aa17.79■□□□□ 0.44
PCDHA3-201ENST00000522353 ELMSAN1Q6PJG2 1045 aa17.79■□□□□ 0.44
PCDHA3-201ENST00000522353 GPIHBP1Q8IV16 184 aa17.79■□□□□ 0.44
PCDHA3-201ENST00000522353 BBS5Q8N3I7 341 aa17.79■□□□□ 0.44
PCDHA3-201ENST00000522353 ANTXR1Q9H6X2 564 aa17.79■□□□□ 0.44
PCDHA3-201ENST00000522353 IFT122Q9HBG6 1241 aa17.79■□□□□ 0.44
PCDHA3-201ENST00000522353 TARBP1Q13395 1621 aaKnown RBP17.79■□□□□ 0.44
PCDHA3-201ENST00000522353 GCC2Q8IWJ2 1684 aa17.79■□□□□ 0.44
PCDHA3-201ENST00000522353 H7C1W4 665 aa17.79■□□□□ 0.44
PCDHA3-201ENST00000522353 CYP27B1O15528 508 aa17.79■□□□□ 0.44
PCDHA3-201ENST00000522353 HPDP32754 393 aaPredicted RBP17.79■□□□□ 0.44
PCDHA3-201ENST00000522353 LONRF2Q1L5Z9 754 aa17.79■□□□□ 0.44
PCDHA3-201ENST00000522353 MAP7D3Q8IWC1 876 aa17.79■□□□□ 0.44
PCDHA3-201ENST00000522353 ACCSQ96QU6 501 aa17.79■□□□□ 0.44
PCDHA3-201ENST00000522353 DTNBO60941 627 aa17.78■□□□□ 0.44
PCDHA3-201ENST00000522353 P3H4Q92791 437 aa17.78■□□□□ 0.44
PCDHA3-201ENST00000522353 MAP3K4Q9Y6R4 1608 aa17.78■□□□□ 0.44
PCDHA3-201ENST00000522353 H2AFZP0C0S5 128 aa17.78■□□□□ 0.44
PCDHA3-201ENST00000522353 MFAP3P55082 362 aa17.78■□□□□ 0.44
PCDHA3-201ENST00000522353 SCRN1Q12765 414 aa17.78■□□□□ 0.44
PCDHA3-201ENST00000522353 RASGRF1Q13972 1273 aa17.78■□□□□ 0.44
PCDHA3-201ENST00000522353 PLCB4Q15147 1175 aa17.78■□□□□ 0.44
PCDHA3-201ENST00000522353 Q3C1V9 767 aa17.78■□□□□ 0.44
PCDHA3-201ENST00000522353 H2AFVQ71UI9 128 aa17.78■□□□□ 0.44
PCDHA3-201ENST00000522353 GADD45GIP1Q8TAE8 222 aaPredicted RBP17.78■□□□□ 0.44
PCDHA3-201ENST00000522353 GRK7Q8WTQ7 553 aa17.78■□□□□ 0.44
PCDHA3-201ENST00000522353 CFAP57Q96MR6 1250 aa17.78■□□□□ 0.44
PCDHA3-201ENST00000522353 TSPOAP1O95153 1857 aa17.78■□□□□ 0.44
PCDHA3-201ENST00000522353 M0R2C6 588 aa17.78■□□□□ 0.44
PCDHA3-201ENST00000522353 EXOC3L4Q17RC7 722 aa17.78■□□□□ 0.44
PCDHA3-201ENST00000522353 HHATQ5VTY9 493 aa17.78■□□□□ 0.44
PCDHA3-201ENST00000522353 TBCKQ8TEA7 893 aa17.78■□□□□ 0.44
PCDHA3-201ENST00000522353 PRPF31Q8WWY3 499 aaKnown RBP17.78■□□□□ 0.44
PCDHA3-201ENST00000522353 TMEM206Q9H813 350 aa17.78■□□□□ 0.44
PCDHA3-201ENST00000522353 DISC1Q9NRI5 854 aa17.78■□□□□ 0.44
PCDHA3-201ENST00000522353 CIB2O75838 187 aa17.78■□□□□ 0.44
PCDHA3-201ENST00000522353 PSAPP07602 524 aa17.78■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 60.3 ms