RNA–Protein interactions for RNA: ENST00000514755.5

UBE2D3-232, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 4

Gene UBE2D3, Length 593 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-232ENST00000514755 ERICH6BQ5W0A0 696 aa12.93□□□□□ -0.34
UBE2D3-232ENST00000514755 KIAA1211Q6ZU35 1233 aa12.93□□□□□ -0.34
UBE2D3-232ENST00000514755 FAM160B2Q86V87 743 aa12.93□□□□□ -0.34
UBE2D3-232ENST00000514755 PNMA1Q8ND90 353 aa12.93□□□□□ -0.34
UBE2D3-232ENST00000514755 IL27Q8NEV9 243 aa12.93□□□□□ -0.34
UBE2D3-232ENST00000514755 CHURC1Q8WUH1 139 aa12.93□□□□□ -0.34
UBE2D3-232ENST00000514755 ANKS1AQ92625 1134 aa12.93□□□□□ -0.34
UBE2D3-232ENST00000514755 AGBL1Q96MI9 1066 aa12.93□□□□□ -0.34
UBE2D3-232ENST00000514755 CNNM2Q9H8M5 875 aa12.93□□□□□ -0.34
UBE2D3-232ENST00000514755 PAK6Q9NQU5 681 aaPredicted RBP12.93□□□□□ -0.34
UBE2D3-232ENST00000514755 TSR3Q9UJK0 312 aaKnown RBP12.93□□□□□ -0.34
UBE2D3-232ENST00000514755 SMCHD1A6NHR9 2005 aa12.93□□□□□ -0.34
UBE2D3-232ENST00000514755 STRNO43815 780 aa12.92□□□□□ -0.34
UBE2D3-232ENST00000514755 GJB1P08034 283 aa12.92□□□□□ -0.34
UBE2D3-232ENST00000514755 CCND3P30281 292 aaPredicted RBP12.92□□□□□ -0.34
UBE2D3-232ENST00000514755 CYP2C19P33261 490 aa12.92□□□□□ -0.34
UBE2D3-232ENST00000514755 ZNF543Q08ER8 600 aa12.92□□□□□ -0.34
UBE2D3-232ENST00000514755 CREB3L3Q68CJ9 461 aa12.92□□□□□ -0.34
UBE2D3-232ENST00000514755 CCDC174Q6PII3 467 aa12.92□□□□□ -0.34
UBE2D3-232ENST00000514755 BTNL9Q6UXG8 535 aa12.92□□□□□ -0.34
UBE2D3-232ENST00000514755 DPP9Q86TI2 863 aa12.92□□□□□ -0.34
UBE2D3-232ENST00000514755 SPNS2Q8IVW8 549 aa12.92□□□□□ -0.34
UBE2D3-232ENST00000514755 MB21D2Q8IYB1 491 aaPredicted RBP12.92□□□□□ -0.34
UBE2D3-232ENST00000514755 U2AF1L4Q8WU68 220 aaKnown RBP12.92□□□□□ -0.34
UBE2D3-232ENST00000514755 DEFB118Q96PH6 123 aa12.92□□□□□ -0.34
UBE2D3-232ENST00000514755 MMP19Q99542 508 aa12.92□□□□□ -0.34
UBE2D3-232ENST00000514755 XRN2Q9H0D6 950 aaKnown RBP eCLIP12.92□□□□□ -0.348e-9■■□□□ 13.6
UBE2D3-232ENST00000514755 KAT14Q9H8E8 782 aa12.92□□□□□ -0.34
UBE2D3-232ENST00000514755 RPTORQ8N122 1335 aa12.91□□□□□ -0.34
UBE2D3-232ENST00000514755 SGPL1O95470 568 aa12.91□□□□□ -0.34
UBE2D3-232ENST00000514755 FCER1AP12319 257 aa12.91□□□□□ -0.34
UBE2D3-232ENST00000514755 GJA8P48165 433 aa12.91□□□□□ -0.34
UBE2D3-232ENST00000514755 NT5C2P49902 561 aa12.91□□□□□ -0.34
UBE2D3-232ENST00000514755 TRDNQ13061 729 aa12.91□□□□□ -0.34
UBE2D3-232ENST00000514755 SYDE2Q5VT97 1194 aa12.91□□□□□ -0.34
UBE2D3-232ENST00000514755 ABRAQ8N0Z2 381 aa12.91□□□□□ -0.34
UBE2D3-232ENST00000514755 NCOA7Q8NI08 942 aa12.91□□□□□ -0.34
UBE2D3-232ENST00000514755 KCTD12Q96CX2 325 aaKnown RBP12.91□□□□□ -0.34
UBE2D3-232ENST00000514755 UBAC1Q9BSL1 405 aa12.91□□□□□ -0.34
UBE2D3-232ENST00000514755 UBA5Q9GZZ9 404 aa12.91□□□□□ -0.34
UBE2D3-232ENST00000514755 RANBP17Q9H2T7 1088 aaKnown RBP12.91□□□□□ -0.34
UBE2D3-232ENST00000514755 HOMER2Q9NSB8 354 aa12.91□□□□□ -0.34
UBE2D3-232ENST00000514755 CTDP1Q9Y5B0 961 aaPredicted RBP12.91□□□□□ -0.34
UBE2D3-232ENST00000514755 MKI67P46013 3256 aaKnown RBP12.91□□□□□ -0.34
UBE2D3-232ENST00000514755 CFHP08603 1231 aa12.9□□□□□ -0.34
UBE2D3-232ENST00000514755 OAZ1P54368 228 aa12.9□□□□□ -0.34
UBE2D3-232ENST00000514755 KCTD2Q14681 263 aa12.9□□□□□ -0.34
UBE2D3-232ENST00000514755 ZNF792Q3KQV3 632 aa12.9□□□□□ -0.34
UBE2D3-232ENST00000514755 CCDC178Q5BJE1 867 aa12.9□□□□□ -0.34
UBE2D3-232ENST00000514755 IFIT1BQ5T764 474 aaKnown RBP12.9□□□□□ -0.34
UBE2D3-232ENST00000514755 RALYLQ86SE5 291 aaKnown RBP12.9□□□□□ -0.34
UBE2D3-232ENST00000514755 STAG2Q8N3U4 1231 aa12.9□□□□□ -0.34
UBE2D3-232ENST00000514755 TRPV1Q8NER1 839 aa12.9□□□□□ -0.34
UBE2D3-232ENST00000514755 MAML3Q96JK9 1138 aa12.9□□□□□ -0.34
UBE2D3-232ENST00000514755 HMX1Q9NP08 348 aaPredicted RBP12.9□□□□□ -0.34
UBE2D3-232ENST00000514755 PLXNA1Q9UIW2 1896 aa12.9□□□□□ -0.34
UBE2D3-232ENST00000514755 IFIT3O14879 490 aaKnown RBP12.89□□□□□ -0.35
UBE2D3-232ENST00000514755 FDX1P10109 184 aa12.89□□□□□ -0.35
UBE2D3-232ENST00000514755 ALAS1P13196 640 aa12.89□□□□□ -0.35
UBE2D3-232ENST00000514755 COPB2P35606 906 aa12.89□□□□□ -0.35
UBE2D3-232ENST00000514755 MUM1L1Q5H9M0 696 aa12.89□□□□□ -0.35
UBE2D3-232ENST00000514755 PRAMEF19Q5SWL8 479 aa12.89□□□□□ -0.35
UBE2D3-232ENST00000514755 TRMT44Q8IYL2 757 aaKnown RBP12.89□□□□□ -0.35
UBE2D3-232ENST00000514755 IGDCC4Q8TDY8 1250 aa12.89□□□□□ -0.35
UBE2D3-232ENST00000514755 FGD4Q96M96 766 aa12.89□□□□□ -0.35
UBE2D3-232ENST00000514755 RNF146Q9NTX7 359 aa12.89□□□□□ -0.35
UBE2D3-232ENST00000514755 DNAJC25-GNG10A0A024R161 153 aa12.88□□□□□ -0.35
UBE2D3-232ENST00000514755 CYBAP13498 195 aa12.88□□□□□ -0.35
UBE2D3-232ENST00000514755 SLC35G1Q2M3R5 365 aa12.88□□□□□ -0.35
UBE2D3-232ENST00000514755 ADCK5Q3MIX3 580 aa12.88□□□□□ -0.35
UBE2D3-232ENST00000514755 MFSD14CQ5VZR4 134 aa12.88□□□□□ -0.35
UBE2D3-232ENST00000514755 OLFML2BQ68BL8 750 aa12.88□□□□□ -0.35
UBE2D3-232ENST00000514755 CASC1Q6TDU7 716 aa12.88□□□□□ -0.35
UBE2D3-232ENST00000514755 CHST13Q8NET6 341 aa12.88□□□□□ -0.35
UBE2D3-232ENST00000514755 SPIRE2Q8WWL2 714 aa12.88□□□□□ -0.35
UBE2D3-232ENST00000514755 TRERF1Q96PN7 1200 aa12.88□□□□□ -0.35
UBE2D3-232ENST00000514755 PURBQ96QR8 312 aaKnown RBP12.88□□□□□ -0.35
UBE2D3-232ENST00000514755 LRRC2Q9BYS8 371 aa12.88□□□□□ -0.35
UBE2D3-232ENST00000514755 A1CFQ9NQ94 594 aaKnown RBP12.88□□□□□ -0.35
UBE2D3-232ENST00000514755 CCPG1Q9ULG6 757 aa12.88□□□□□ -0.35
UBE2D3-232ENST00000514755 PRC1O43663 620 aa12.87□□□□□ -0.35
UBE2D3-232ENST00000514755 ICAM1P05362 532 aa12.87□□□□□ -0.35
UBE2D3-232ENST00000514755 PARP1P09874 1014 aaKnown RBP12.87□□□□□ -0.35
UBE2D3-232ENST00000514755 CNTN2Q02246 1040 aa12.87□□□□□ -0.35
UBE2D3-232ENST00000514755 WTAPQ15007 396 aa12.87□□□□□ -0.35
UBE2D3-232ENST00000514755 TMEM67Q5HYA8 995 aa12.87□□□□□ -0.35
UBE2D3-232ENST00000514755 GPATCH4Q5T3I0 446 aaKnown RBP12.87□□□□□ -0.35
UBE2D3-232ENST00000514755 UBE2Q1Q7Z7E8 422 aa12.87□□□□□ -0.35
UBE2D3-232ENST00000514755 ADGRF4Q8IZF3 695 aa12.87□□□□□ -0.35
UBE2D3-232ENST00000514755 ANKRD35Q8N283 1001 aa12.87□□□□□ -0.35
UBE2D3-232ENST00000514755 DIS3LQ8TF46 1054 aaKnown RBP12.87□□□□□ -0.35
UBE2D3-232ENST00000514755 DDX11Q96FC9 970 aa12.87□□□□□ -0.35
UBE2D3-232ENST00000514755 ACAD9Q9H845 621 aa12.87□□□□□ -0.35
UBE2D3-232ENST00000514755 LY9Q9HBG7 655 aa12.87□□□□□ -0.35
UBE2D3-232ENST00000514755 MAD2L2Q9UI95 211 aa12.87□□□□□ -0.35
UBE2D3-232ENST00000514755 DDX49Q9Y6V7 483 aaKnown RBP12.87□□□□□ -0.35
UBE2D3-232ENST00000514755 LCTP09848 1927 aa12.86□□□□□ -0.35
UBE2D3-232ENST00000514755 FRMPD3Q5JV73 1810 aa12.86□□□□□ -0.35
UBE2D3-232ENST00000514755 NFIBO00712 420 aa12.86□□□□□ -0.35
UBE2D3-232ENST00000514755 SH2B2O14492 632 aaPredicted RBP12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms