RNA–Protein interactions for RNA: ENST00000513222.1

CCHCR1-230, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 4

Gene CCHCR1, Length 511 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-230ENST00000513222 RBM8AQ9Y5S9 174 aaKnown RBP22.71■■□□□ 1.23
CCHCR1-230ENST00000513222 MYCNP04198 464 aaPredicted RBP22.7■■□□□ 1.22
CCHCR1-230ENST00000513222 SMPD1P17405 629 aa22.7■■□□□ 1.22
CCHCR1-230ENST00000513222 IRX5P78411 483 aaPredicted RBP22.7■■□□□ 1.22
CCHCR1-230ENST00000513222 NECTIN1Q15223 517 aa22.7■■□□□ 1.22
CCHCR1-230ENST00000513222 QRICH1Q2TAL8 776 aa22.7■■□□□ 1.22
CCHCR1-230ENST00000513222 DUSP28Q4G0W2 176 aa22.7■■□□□ 1.22
CCHCR1-230ENST00000513222 GNASQ5JWF2 1037 aa22.7■■□□□ 1.22
CCHCR1-230ENST00000513222 SLC43A3Q8NBI5 491 aa22.7■■□□□ 1.22
CCHCR1-230ENST00000513222 UBE2OQ9C0C9 1292 aaKnown RBP22.7■■□□□ 1.22
CCHCR1-230ENST00000513222 RIOX1Q9H6W3 641 aa22.7■■□□□ 1.22
CCHCR1-230ENST00000513222 STARD7Q9NQZ5 370 aa22.7■■□□□ 1.22
CCHCR1-230ENST00000513222 PDGFCQ9NRA1 345 aa22.7■■□□□ 1.22
CCHCR1-230ENST00000513222 LAMA2P24043 3122 aaKnown RBP22.7■■□□□ 1.22
CCHCR1-230ENST00000513222 PTPDC1A2A3K4 754 aa22.69■■□□□ 1.22
CCHCR1-230ENST00000513222 TRIM43BA6NCK2 446 aa22.69■■□□□ 1.22
CCHCR1-230ENST00000513222 KLRF2D3W0D1 207 aa22.69■■□□□ 1.22
CCHCR1-230ENST00000513222 ANTXR2P58335 489 aa22.69■■□□□ 1.22
CCHCR1-230ENST00000513222 GRM4Q14833 912 aa22.69■■□□□ 1.22
CCHCR1-230ENST00000513222 SAMD3Q8N6K7 520 aa22.69■■□□□ 1.22
CCHCR1-230ENST00000513222 TRIM43Q96BQ3 446 aaPredicted RBP22.69■■□□□ 1.22
CCHCR1-230ENST00000513222 GLT1D1Q96MS3 346 aa22.69■■□□□ 1.22
CCHCR1-230ENST00000513222 SEZ6LQ9BYH1 1024 aa22.69■■□□□ 1.22
CCHCR1-230ENST00000513222 MAP3K20Q9NYL2 800 aaKnown RBP22.69■■□□□ 1.22
CCHCR1-230ENST00000513222 PRKAG2Q9UGJ0 569 aa22.69■■□□□ 1.22
CCHCR1-230ENST00000513222 DDX49Q9Y6V7 483 aaKnown RBP22.69■■□□□ 1.22
CCHCR1-230ENST00000513222 SOX1O00570 391 aaPredicted RBP22.68■■□□□ 1.22
CCHCR1-230ENST00000513222 CABYRO75952 493 aa22.68■■□□□ 1.22
CCHCR1-230ENST00000513222 MDM2Q00987 491 aaPredicted RBP22.68■■□□□ 1.22
CCHCR1-230ENST00000513222 FAAP100Q0VG06 881 aa22.68■■□□□ 1.22
CCHCR1-230ENST00000513222 SLC35G1Q2M3R5 365 aa22.68■■□□□ 1.22
CCHCR1-230ENST00000513222 SH3RF1Q7Z6J0 888 aa22.68■■□□□ 1.22
CCHCR1-230ENST00000513222 RALYLQ86SE5 291 aaKnown RBP22.68■■□□□ 1.22
CCHCR1-230ENST00000513222 TLK2Q86UE8 772 aa22.68■■□□□ 1.22
CCHCR1-230ENST00000513222 FBXO16Q8IX29 292 aaPredicted RBP22.68■■□□□ 1.22
CCHCR1-230ENST00000513222 LBHD1Q9BQE6 289 aaPredicted RBP22.68■■□□□ 1.22
CCHCR1-230ENST00000513222 MROH7Q68CQ1 1323 aa22.67■■□□□ 1.22
CCHCR1-230ENST00000513222 OPLAHO14841 1288 aa22.67■■□□□ 1.22
CCHCR1-230ENST00000513222 IFIT3O14879 490 aaKnown RBP22.67■■□□□ 1.22
CCHCR1-230ENST00000513222 CLTBP09497 229 aa22.67■■□□□ 1.22
CCHCR1-230ENST00000513222 SART3Q15020 963 aaKnown RBP22.67■■□□□ 1.22
CCHCR1-230ENST00000513222 KIAA1211Q6ZU35 1233 aa22.67■■□□□ 1.22
CCHCR1-230ENST00000513222 FBXO11Q86XK2 927 aa22.67■■□□□ 1.22
CCHCR1-230ENST00000513222 MCF2L2Q86YR7 1114 aa22.67■■□□□ 1.22
CCHCR1-230ENST00000513222 MPHOSPH6Q99547 160 aaKnown RBP22.67■■□□□ 1.22
CCHCR1-230ENST00000513222 SENP2Q9HC62 589 aa22.67■■□□□ 1.22
CCHCR1-230ENST00000513222 MRPL11Q9Y3B7 192 aaKnown RBP22.67■■□□□ 1.22
CCHCR1-230ENST00000513222 SCN10AQ9Y5Y9 1956 aa22.67■■□□□ 1.22
CCHCR1-230ENST00000513222 B4DLN1 442 aa22.66■■□□□ 1.22
CCHCR1-230ENST00000513222 CALML3P27482 149 aa22.66■■□□□ 1.22
CCHCR1-230ENST00000513222 MRPL12P52815 198 aaKnown RBP22.66■■□□□ 1.22
CCHCR1-230ENST00000513222 WTAPQ15007 396 aa22.66■■□□□ 1.22
CCHCR1-230ENST00000513222 FSCN1Q16658 493 aaKnown RBP22.66■■□□□ 1.22
CCHCR1-230ENST00000513222 USH1GQ495M9 461 aa22.66■■□□□ 1.22
CCHCR1-230ENST00000513222 SYTL5Q8TDW5 730 aaPredicted RBP22.66■■□□□ 1.22
CCHCR1-230ENST00000513222 TBC1D5Q92609 795 aa22.66■■□□□ 1.22
CCHCR1-230ENST00000513222 AMNQ9BXJ7 453 aa22.66■■□□□ 1.22
CCHCR1-230ENST00000513222 TBX21Q9UL17 535 aa22.66■■□□□ 1.22
CCHCR1-230ENST00000513222 A0A0U1RQG5 324 aaPredicted RBP22.65■■□□□ 1.22
CCHCR1-230ENST00000513222 ERICH2A1L162 156 aa22.65■■□□□ 1.22
CCHCR1-230ENST00000513222 ARVCFO00192 962 aa22.65■■□□□ 1.22
CCHCR1-230ENST00000513222 ZBTB5O15062 677 aa22.65■■□□□ 1.22
CCHCR1-230ENST00000513222 NKRFO15226 690 aaKnown RBP eCLIP22.65■■□□□ 1.22
CCHCR1-230ENST00000513222 PPP1R11O60927 126 aaPredicted RBP22.65■■□□□ 1.22
CCHCR1-230ENST00000513222 SMARCA1P28370 1054 aa22.65■■□□□ 1.22
CCHCR1-230ENST00000513222 HSD17B4P51659 736 aa22.65■■□□□ 1.22
CCHCR1-230ENST00000513222 TMEM63BQ5T3F8 832 aa22.65■■□□□ 1.22
CCHCR1-230ENST00000513222 IWS1Q96ST2 819 aa22.65■■□□□ 1.22
CCHCR1-230ENST00000513222 WDR11Q9BZH6 1224 aa22.65■■□□□ 1.22
CCHCR1-230ENST00000513222 AP5M1Q9H0R1 490 aa22.65■■□□□ 1.22
CCHCR1-230ENST00000513222 DCDC2CA8MYV0 355 aa22.64■■□□□ 1.21
CCHCR1-230ENST00000513222 SLC27A2O14975 620 aa22.64■■□□□ 1.21
CCHCR1-230ENST00000513222 DYNC1LI2O43237 492 aaPredicted RBP22.64■■□□□ 1.21
CCHCR1-230ENST00000513222 CYTH3O43739 400 aa22.64■■□□□ 1.21
CCHCR1-230ENST00000513222 CD4P01730 458 aa22.64■■□□□ 1.21
CCHCR1-230ENST00000513222 ITGB8P26012 769 aa22.64■■□□□ 1.21
CCHCR1-230ENST00000513222 TRAF1Q13077 416 aa22.64■■□□□ 1.21
CCHCR1-230ENST00000513222 EEPD1Q7L9B9 569 aa22.64■■□□□ 1.21
CCHCR1-230ENST00000513222 TMTC2Q8N394 836 aa22.64■■□□□ 1.21
CCHCR1-230ENST00000513222 LY9Q9HBG7 655 aa22.64■■□□□ 1.21
CCHCR1-230ENST00000513222 COL20A1Q9P218 1284 aa22.64■■□□□ 1.21
CCHCR1-230ENST00000513222 GRIN2DO15399 1336 aa22.63■■□□□ 1.21
CCHCR1-230ENST00000513222 BEX3Q00994 111 aa22.63■■□□□ 1.21
CCHCR1-230ENST00000513222 TSGA10IPQ3SY00 556 aa22.63■■□□□ 1.21
CCHCR1-230ENST00000513222 TMEM67Q5HYA8 995 aa22.63■■□□□ 1.21
CCHCR1-230ENST00000513222 CCDC62Q6P9F0 684 aa22.63■■□□□ 1.21
CCHCR1-230ENST00000513222 FAM126BQ8IXS8 530 aa22.63■■□□□ 1.21
CCHCR1-230ENST00000513222 NSUN6Q8TEA1 469 aaKnown RBP22.63■■□□□ 1.21
CCHCR1-230ENST00000513222 SCFD2Q8WU76 684 aa22.63■■□□□ 1.21
CCHCR1-230ENST00000513222 BADQ92934 168 aa22.63■■□□□ 1.21
CCHCR1-230ENST00000513222 LRCH3Q96II8 777 aa22.63■■□□□ 1.21
CCHCR1-230ENST00000513222 TMEM87BQ96K49 555 aa22.63■■□□□ 1.21
CCHCR1-230ENST00000513222 VAT1LQ9HCJ6 419 aa22.63■■□□□ 1.21
CCHCR1-230ENST00000513222 ZEB2O60315 1214 aa22.62■■□□□ 1.21
CCHCR1-230ENST00000513222 PQBP1O60828 265 aaKnown RBP22.62■■□□□ 1.21
CCHCR1-230ENST00000513222 MCM5P33992 734 aa22.62■■□□□ 1.21
CCHCR1-230ENST00000513222 LIFRP42702 1097 aa22.62■■□□□ 1.21
CCHCR1-230ENST00000513222 PDE4DQ08499 809 aa22.62■■□□□ 1.21
CCHCR1-230ENST00000513222 CREB3L3Q68CJ9 461 aa22.62■■□□□ 1.21
CCHCR1-230ENST00000513222 CATIPQ7Z7H3 387 aa22.62■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms