RNA–Protein interactions for RNA: ENST00000503360.1

HMGB1P35-201, Transcript of high mobility group box 1 pseudogene 35, humanhuman

BASIC

Gene HMGB1P35, Length 598 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P35-201ENST00000503360 SCAMP3O14828 347 aaKnown RBP3.98□□□□□ -1.77
HMGB1P35-201ENST00000503360 ANKRD39Q53RE8 183 aa3.98□□□□□ -1.77
HMGB1P35-201ENST00000503360 CRB2Q5IJ48 1285 aa3.98□□□□□ -1.77
HMGB1P35-201ENST00000503360 SNAP47Q5SQN1 464 aa3.98□□□□□ -1.77
HMGB1P35-201ENST00000503360 OVOS1Q6IE37 1185 aa3.98□□□□□ -1.77
HMGB1P35-201ENST00000503360 CRTC3Q6UUV7 619 aa3.98□□□□□ -1.77
HMGB1P35-201ENST00000503360 CABP7Q86V35 215 aa3.98□□□□□ -1.77
HMGB1P35-201ENST00000503360 REXO1Q8N1G1 1221 aaKnown RBP3.98□□□□□ -1.77
HMGB1P35-201ENST00000503360 GOLM1Q8NBJ4 401 aa3.98□□□□□ -1.77
HMGB1P35-201ENST00000503360 SH3RF3Q8TEJ3 882 aaPredicted RBP3.98□□□□□ -1.77
HMGB1P35-201ENST00000503360 ATG4CQ96DT6 458 aa3.98□□□□□ -1.77
HMGB1P35-201ENST00000503360 PEX11GQ96HA9 241 aa3.98□□□□□ -1.77
HMGB1P35-201ENST00000503360 DHRS1Q96LJ7 313 aa3.98□□□□□ -1.77
HMGB1P35-201ENST00000503360 ZNF747Q9BV97 191 aa3.98□□□□□ -1.77
HMGB1P35-201ENST00000503360 IGSF5Q9NSI5 407 aa3.98□□□□□ -1.77
HMGB1P35-201ENST00000503360 DBR1Q9UK59 544 aaKnown RBP3.98□□□□□ -1.77
HMGB1P35-201ENST00000503360 NUDT5Q9UKK9 219 aa3.98□□□□□ -1.77
HMGB1P35-201ENST00000503360 HCFC2Q9Y5Z7 792 aa3.98□□□□□ -1.77
HMGB1P35-201ENST00000503360 C9orf118A6NHY6 69 aa3.97□□□□□ -1.77
HMGB1P35-201ENST00000503360 SMARCA5O60264 1052 aaPredicted RBP3.97□□□□□ -1.77
HMGB1P35-201ENST00000503360 GREM1O60565 184 aa3.97□□□□□ -1.77
HMGB1P35-201ENST00000503360 TBC1D8O95759 1140 aa3.97□□□□□ -1.77
HMGB1P35-201ENST00000503360 PMLP29590 882 aa3.97□□□□□ -1.77
HMGB1P35-201ENST00000503360 L1CAMP32004 1257 aa3.97□□□□□ -1.77
HMGB1P35-201ENST00000503360 GBP2P32456 591 aaPredicted RBP3.97□□□□□ -1.77
HMGB1P35-201ENST00000503360 C9orf131Q5VYM1 1079 aa3.97□□□□□ -1.77
HMGB1P35-201ENST00000503360 INTS3Q68E01 1043 aaKnown RBP3.97□□□□□ -1.77
HMGB1P35-201ENST00000503360 CWF19L1Q69YN2 538 aaKnown RBP3.97□□□□□ -1.77
HMGB1P35-201ENST00000503360 SPRED1Q7Z699 444 aa3.97□□□□□ -1.77
HMGB1P35-201ENST00000503360 DNERQ8NFT8 737 aa3.97□□□□□ -1.77
HMGB1P35-201ENST00000503360 SMARCC1Q92922 1105 aaPredicted RBP3.97□□□□□ -1.77
HMGB1P35-201ENST00000503360 MKRN2Q9H000 416 aaKnown RBP3.97□□□□□ -1.77
HMGB1P35-201ENST00000503360 FBXL21Q9UKT6 434 aa3.97□□□□□ -1.77
HMGB1P35-201ENST00000503360 PLA2G2DQ9UNK4 145 aa3.97□□□□□ -1.77
HMGB1P35-201ENST00000503360 MINPP1Q9UNW1 487 aa3.97□□□□□ -1.77
HMGB1P35-201ENST00000503360 PCDHB14Q9Y5E9 798 aa3.97□□□□□ -1.77
HMGB1P35-201ENST00000503360 MROH6A6NGR9 719 aa3.96□□□□□ -1.78
HMGB1P35-201ENST00000503360 GSTM1P09488 218 aa3.96□□□□□ -1.78
HMGB1P35-201ENST00000503360 NME1P15531 152 aaKnown RBP3.96□□□□□ -1.78
HMGB1P35-201ENST00000503360 POLR2BP30876 1174 aaKnown RBP3.96□□□□□ -1.78
HMGB1P35-201ENST00000503360 ZNF76P36508 570 aa3.96□□□□□ -1.78
HMGB1P35-201ENST00000503360 HDLBPQ00341 1268 aaKnown RBP3.96□□□□□ -1.78
HMGB1P35-201ENST00000503360 FANCCQ00597 558 aa3.96□□□□□ -1.78
HMGB1P35-201ENST00000503360 RGL3Q3MIN7 710 aa3.96□□□□□ -1.78
HMGB1P35-201ENST00000503360 PLEKHH3Q7Z736 793 aa3.96□□□□□ -1.78
HMGB1P35-201ENST00000503360 ZFPM1Q8IX07 1006 aa3.96□□□□□ -1.78
HMGB1P35-201ENST00000503360 TMEM192Q8IY95 271 aa3.96□□□□□ -1.78
HMGB1P35-201ENST00000503360 C7orf61Q8IZ16 206 aa3.96□□□□□ -1.78
HMGB1P35-201ENST00000503360 SMARCC2Q8TAQ2 1214 aa3.96□□□□□ -1.78
HMGB1P35-201ENST00000503360 RNF34Q969K3 372 aa3.96□□□□□ -1.78
HMGB1P35-201ENST00000503360 NOX5Q96PH1 765 aa3.96□□□□□ -1.78
HMGB1P35-201ENST00000503360 KLC2Q9H0B6 622 aa3.96□□□□□ -1.78
HMGB1P35-201ENST00000503360 VPS11Q9H270 941 aa3.96□□□□□ -1.78
HMGB1P35-201ENST00000503360 CD248Q9HCU0 757 aa3.96□□□□□ -1.78
HMGB1P35-201ENST00000503360 METTL5Q9NRN9 209 aaKnown RBP3.96□□□□□ -1.78
HMGB1P35-201ENST00000503360 INVSQ9Y283 1065 aa3.96□□□□□ -1.78
HMGB1P35-201ENST00000503360 TESMINQ9Y4I5 508 aa3.96□□□□□ -1.78
HMGB1P35-201ENST00000503360 THBS2P35442 1172 aa3.95□□□□□ -1.78
HMGB1P35-201ENST00000503360 MC3RP41968 323 aa3.95□□□□□ -1.78
HMGB1P35-201ENST00000503360 POU4F1Q01851 419 aa3.95□□□□□ -1.78
HMGB1P35-201ENST00000503360 NT5DC4Q86YG4 428 aa3.95□□□□□ -1.78
HMGB1P35-201ENST00000503360 TTLL6Q8N841 843 aa3.95□□□□□ -1.78
HMGB1P35-201ENST00000503360 ZBTB8AQ96BR9 441 aa3.95□□□□□ -1.78
HMGB1P35-201ENST00000503360 PTCHD1Q96NR3 888 aa3.95□□□□□ -1.78
HMGB1P35-201ENST00000503360 DSCC1Q9BVC3 393 aa3.95□□□□□ -1.78
HMGB1P35-201ENST00000503360 BRMS1Q9HCU9 246 aa3.95□□□□□ -1.78
HMGB1P35-201ENST00000503360 SUCOQ9UBS9 1254 aaKnown RBP3.95□□□□□ -1.78
HMGB1P35-201ENST00000503360 SUPT16HQ9Y5B9 1047 aaKnown RBP3.95□□□□□ -1.78
HMGB1P35-201ENST00000503360 A0A087WZG4 1122 aa3.94□□□□□ -1.78
HMGB1P35-201ENST00000503360 MEIS1O00470 390 aa3.94□□□□□ -1.78
HMGB1P35-201ENST00000503360 SHOXO15266 292 aa3.94□□□□□ -1.78
HMGB1P35-201ENST00000503360 LAMTOR5O43504 91 aa3.94□□□□□ -1.78
HMGB1P35-201ENST00000503360 CYP2C8P10632 490 aa3.94□□□□□ -1.78
HMGB1P35-201ENST00000503360 ERCC5P28715 1186 aaPredicted RBP3.94□□□□□ -1.78
HMGB1P35-201ENST00000503360 RCSD1Q6JBY9 416 aa3.94□□□□□ -1.78
HMGB1P35-201ENST00000503360 HS2ST1Q7LGA3 356 aa3.94□□□□□ -1.78
HMGB1P35-201ENST00000503360 METTL16Q86W50 562 aaKnown RBP3.94□□□□□ -1.78
HMGB1P35-201ENST00000503360 TAB3Q8N5C8 712 aaPredicted RBP3.94□□□□□ -1.78
HMGB1P35-201ENST00000503360 KYQ8NBH2 561 aa3.94□□□□□ -1.78
HMGB1P35-201ENST00000503360 ZNF512BQ96KM6 892 aaPredicted RBP3.94□□□□□ -1.78
HMGB1P35-201ENST00000503360 SLC6A18Q96N87 628 aa3.94□□□□□ -1.78
HMGB1P35-201ENST00000503360 C11orf84Q9BUA3 381 aaPredicted RBP3.94□□□□□ -1.78
HMGB1P35-201ENST00000503360 GGT7Q9UJ14 662 aa3.94□□□□□ -1.78
HMGB1P35-201ENST00000503360 ZNF536O15090 1300 aa3.94□□□□□ -1.78
HMGB1P35-201ENST00000503360 PRR31Q5SQ13 230 aa3.93□□□□□ -1.78
HMGB1P35-201ENST00000503360 EEF1DP3Q658K8 133 aa3.93□□□□□ -1.78
HMGB1P35-201ENST00000503360 FBXL19Q6PCT2 694 aa3.93□□□□□ -1.78
HMGB1P35-201ENST00000503360 ERMP1Q7Z2K6 904 aa3.93□□□□□ -1.78
HMGB1P35-201ENST00000503360 FBXO27Q8NI29 283 aa3.93□□□□□ -1.78
HMGB1P35-201ENST00000503360 LCORQ96JN0 433 aaPredicted RBP3.93□□□□□ -1.78
HMGB1P35-201ENST00000503360 FCRL3Q96P31 734 aaPredicted RBP3.93□□□□□ -1.78
HMGB1P35-201ENST00000503360 WDR26Q9H7D7 661 aa3.93□□□□□ -1.78
HMGB1P35-201ENST00000503360 PPP4R1LQ9P1A2 415 aa3.93□□□□□ -1.78
HMGB1P35-201ENST00000503360 ST6GALNAC2Q9UJ37 374 aa3.93□□□□□ -1.78
HMGB1P35-201ENST00000503360 SF3B6Q9Y3B4 125 aaKnown RBP3.93□□□□□ -1.78
HMGB1P35-201ENST00000503360 FHOD1Q9Y613 1164 aa3.93□□□□□ -1.78
HMGB1P35-201ENST00000503360 F6X3S4 739 aa3.92□□□□□ -1.78
HMGB1P35-201ENST00000503360 SELENOPP49908 381 aa3.92□□□□□ -1.78
HMGB1P35-201ENST00000503360 PMS1P54277 932 aaKnown RBP3.92□□□□□ -1.78
HMGB1P35-201ENST00000503360 TGFB2P61812 414 aa3.92□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms