RNA–Protein interactions for RNA: ENST00000494646.1

MSH5-218, Transcript of mutS homolog 5, humanhuman

TSL 4

Gene MSH5, Length 528 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-218ENST00000494646 DHX16O60231 1041 aaKnown RBP11.23□□□□□ -0.61
MSH5-218ENST00000494646 RAG1P15918 1043 aa11.23□□□□□ -0.61
MSH5-218ENST00000494646 ALDH5A1P51649 535 aaPredicted RBP11.23□□□□□ -0.61
MSH5-218ENST00000494646 RPS6P62753 249 aaKnown RBP11.23□□□□□ -0.61
MSH5-218ENST00000494646 GPATCH4Q5T3I0 446 aaKnown RBP11.23□□□□□ -0.61
MSH5-218ENST00000494646 SLC30A10Q6XR72 485 aa11.23□□□□□ -0.61
MSH5-218ENST00000494646 ADGRF4Q8IZF3 695 aa11.23□□□□□ -0.61
MSH5-218ENST00000494646 DEFB123Q8N688 67 aa11.23□□□□□ -0.61
MSH5-218ENST00000494646 RUFY2Q8WXA3 655 aa11.23□□□□□ -0.61
MSH5-218ENST00000494646 UPF3AQ9H1J1 476 aaKnown RBP11.23□□□□□ -0.61
MSH5-218ENST00000494646 ADD3Q9UEY8 706 aaKnown RBP11.23□□□□□ -0.61
MSH5-218ENST00000494646 GNEQ9Y223 722 aaKnown RBP11.23□□□□□ -0.61
MSH5-218ENST00000494646 MYH7BA7E2Y1 1941 aa11.23□□□□□ -0.61
MSH5-218ENST00000494646 ARVCFO00192 962 aa11.22□□□□□ -0.61
MSH5-218ENST00000494646 ELP1O95163 1332 aa11.22□□□□□ -0.61
MSH5-218ENST00000494646 CYP21A2P08686 494 aa11.22□□□□□ -0.61
MSH5-218ENST00000494646 PARP1P09874 1014 aaKnown RBP11.22□□□□□ -0.61
MSH5-218ENST00000494646 CST5P28325 142 aaPredicted RBP11.22□□□□□ -0.61
MSH5-218ENST00000494646 CDK7P50613 346 aa11.22□□□□□ -0.61
MSH5-218ENST00000494646 EPHB4P54760 987 aa11.22□□□□□ -0.61
MSH5-218ENST00000494646 IFIT1BQ5T764 474 aaKnown RBP11.22□□□□□ -0.61
MSH5-218ENST00000494646 CXCL17Q6UXB2 119 aa11.22□□□□□ -0.61
MSH5-218ENST00000494646 CHST3Q7LGC8 479 aa11.22□□□□□ -0.61
MSH5-218ENST00000494646 TLK2Q86UE8 772 aa11.22□□□□□ -0.61
MSH5-218ENST00000494646 STAG2Q8N3U4 1231 aa11.22□□□□□ -0.61
MSH5-218ENST00000494646 TOX2Q96NM4 488 aa11.22□□□□□ -0.61
MSH5-218ENST00000494646 UBAC1Q9BSL1 405 aa11.22□□□□□ -0.61
MSH5-218ENST00000494646 WDR11Q9BZH6 1224 aa11.22□□□□□ -0.61
MSH5-218ENST00000494646 CNNM2Q9H8M5 875 aa11.22□□□□□ -0.61
MSH5-218ENST00000494646 TAF6LQ9Y6J9 622 aa11.22□□□□□ -0.61
MSH5-218ENST00000494646 KIAA0355O15063 1070 aa11.21□□□□□ -0.61
MSH5-218ENST00000494646 PDE4DQ08499 809 aa11.21□□□□□ -0.61
MSH5-218ENST00000494646 TRDNQ13061 729 aa11.21□□□□□ -0.61
MSH5-218ENST00000494646 CDC37Q16543 378 aaPredicted RBP11.21□□□□□ -0.61
MSH5-218ENST00000494646 FSCN1Q16658 493 aaKnown RBP11.21□□□□□ -0.61
MSH5-218ENST00000494646 ANKRD33Q7Z3H0 272 aa11.21□□□□□ -0.61
MSH5-218ENST00000494646 SKAP1Q86WV1 359 aa11.21□□□□□ -0.61
MSH5-218ENST00000494646 MORC4Q8TE76 937 aa11.21□□□□□ -0.61
MSH5-218ENST00000494646 FAM161BQ96MY7 647 aa11.21□□□□□ -0.61
MSH5-218ENST00000494646 TAAR1Q96RJ0 339 aa11.21□□□□□ -0.61
MSH5-218ENST00000494646 JMJD4Q9H9V9 463 aa11.21□□□□□ -0.61
MSH5-218ENST00000494646 VTA1Q9NP79 307 aa11.21□□□□□ -0.61
MSH5-218ENST00000494646 U3KPZ7 1027 aaPredicted RBP11.21□□□□□ -0.61
MSH5-218ENST00000494646 LRRC37A2A6NM11 1700 aa11.21□□□□□ -0.62
MSH5-218ENST00000494646 WDR19Q8NEZ3 1342 aa11.2□□□□□ -0.62
MSH5-218ENST00000494646 A0A0U1RQG5 324 aaPredicted RBP11.2□□□□□ -0.62
MSH5-218ENST00000494646 E7EWF7 191 aa11.2□□□□□ -0.62
MSH5-218ENST00000494646 IFIT3O14879 490 aaKnown RBP11.2□□□□□ -0.62
MSH5-218ENST00000494646 SGSM2O43147 1006 aa11.2□□□□□ -0.62
MSH5-218ENST00000494646 TIMP1P01033 207 aa11.2□□□□□ -0.62
MSH5-218ENST00000494646 NT5C2P49902 561 aa11.2□□□□□ -0.62
MSH5-218ENST00000494646 PSMC6P62333 389 aa11.2□□□□□ -0.62
MSH5-218ENST00000494646 SEC23AQ15436 765 aa11.2□□□□□ -0.62
MSH5-218ENST00000494646 TMEM132AQ24JP5 1023 aa11.2□□□□□ -0.62
MSH5-218ENST00000494646 QRICH1Q2TAL8 776 aa11.2□□□□□ -0.62
MSH5-218ENST00000494646 ASPRV1Q53RT3 343 aa11.2□□□□□ -0.62
MSH5-218ENST00000494646 COPS5Q92905 334 aa11.2□□□□□ -0.62
MSH5-218ENST00000494646 PPP1R12CQ9BZL4 782 aa11.2□□□□□ -0.62
MSH5-218ENST00000494646 SENP2Q9HC62 589 aa11.2□□□□□ -0.62
MSH5-218ENST00000494646 PNMA2Q9UL42 364 aa11.2□□□□□ -0.62
MSH5-218ENST00000494646 KIAA1217Q5T5P2 1943 aa11.19□□□□□ -0.62
MSH5-218ENST00000494646 GRIN2DO15399 1336 aa11.19□□□□□ -0.62
MSH5-218ENST00000494646 ABCB11O95342 1321 aa11.19□□□□□ -0.62
MSH5-218ENST00000494646 RAD50Q92878 1312 aa11.19□□□□□ -0.62
MSH5-218ENST00000494646 RBM47A0AV96 593 aaKnown RBP11.19□□□□□ -0.62
MSH5-218ENST00000494646 KLRF2D3W0D1 207 aa11.19□□□□□ -0.62
MSH5-218ENST00000494646 ZEB2O60315 1214 aa11.19□□□□□ -0.62
MSH5-218ENST00000494646 MYL3P08590 195 aa11.19□□□□□ -0.62
MSH5-218ENST00000494646 NKX3-2P78367 333 aa11.19□□□□□ -0.62
MSH5-218ENST00000494646 FPGSQ05932 587 aa11.19□□□□□ -0.62
MSH5-218ENST00000494646 ITGA7Q13683 1181 aa11.19□□□□□ -0.62
MSH5-218ENST00000494646 DUSP28Q4G0W2 176 aa11.19□□□□□ -0.62
MSH5-218ENST00000494646 GPR153Q6NV75 609 aa11.19□□□□□ -0.62
MSH5-218ENST00000494646 STOX1Q6ZVD7 989 aa11.19□□□□□ -0.62
MSH5-218ENST00000494646 FBXO11Q86XK2 927 aa11.19□□□□□ -0.62
MSH5-218ENST00000494646 OR6J1Q8NGC5 347 aa11.19□□□□□ -0.62
MSH5-218ENST00000494646 PPP1R13LQ8WUF5 828 aa11.19□□□□□ -0.62
MSH5-218ENST00000494646 MAP4K1Q92918 833 aa11.19□□□□□ -0.62
MSH5-218ENST00000494646 MTMR10Q9NXD2 777 aa11.19□□□□□ -0.62
MSH5-218ENST00000494646 MAD2L2Q9UI95 211 aa11.19□□□□□ -0.62
MSH5-218ENST00000494646 Q9Y3F1 56 aa11.19□□□□□ -0.62
MSH5-218ENST00000494646 MROH7Q68CQ1 1323 aa11.18□□□□□ -0.62
MSH5-218ENST00000494646 ERICH2A1L162 156 aa11.18□□□□□ -0.62
MSH5-218ENST00000494646 PALM3A6NDB9 673 aaPredicted RBP11.18□□□□□ -0.62
MSH5-218ENST00000494646 TLR3O15455 904 aaKnown RBP11.18□□□□□ -0.62
MSH5-218ENST00000494646 CFBP00751 764 aa11.18□□□□□ -0.62
MSH5-218ENST00000494646 CD4P01730 458 aa11.18□□□□□ -0.62
MSH5-218ENST00000494646 ACRP10323 421 aa11.18□□□□□ -0.62
MSH5-218ENST00000494646 TXNP10599 105 aaKnown RBP11.18□□□□□ -0.62
MSH5-218ENST00000494646 CYP2C18P33260 490 aa11.18□□□□□ -0.62
MSH5-218ENST00000494646 WTAPQ15007 396 aa11.18□□□□□ -0.62
MSH5-218ENST00000494646 MFSD5Q6N075 450 aa11.18□□□□□ -0.62
MSH5-218ENST00000494646 SEPT14Q6ZU15 432 aa11.18□□□□□ -0.62
MSH5-218ENST00000494646 RALYLQ86SE5 291 aaKnown RBP11.18□□□□□ -0.62
MSH5-218ENST00000494646 HOMER1Q86YM7 354 aa11.18□□□□□ -0.62
MSH5-218ENST00000494646 FAM126BQ8IXS8 530 aa11.18□□□□□ -0.62
MSH5-218ENST00000494646 RGS22Q8NE09 1264 aa11.18□□□□□ -0.62
MSH5-218ENST00000494646 DNERQ8NFT8 737 aa11.18□□□□□ -0.62
MSH5-218ENST00000494646 NCOA7Q8NI08 942 aa11.18□□□□□ -0.62
MSH5-218ENST00000494646 SYTL5Q8TDW5 730 aaPredicted RBP11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 58.7 ms