RNA–Protein interactions for RNA: ENST00000487172.1

PCOLCE-208, Transcript of procollagen C-endopeptidase enhancer, humanhuman

TSL 2

Gene PCOLCE, Length 686 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCOLCE-208ENST00000487172 PXYLP1Q8TE99 480 aa22.32■■□□□ 1.16
PCOLCE-208ENST00000487172 CCDC12Q8WUD4 166 aaPredicted RBP22.32■■□□□ 1.16
PCOLCE-208ENST00000487172 TBC1D5Q92609 795 aa22.32■■□□□ 1.16
PCOLCE-208ENST00000487172 APBA2Q99767 749 aa22.32■■□□□ 1.16
PCOLCE-208ENST00000487172 ORC3Q9UBD5 711 aaPredicted RBP22.32■■□□□ 1.16
PCOLCE-208ENST00000487172 RBBP6Q7Z6E9 1792 aaKnown RBP22.31■■□□□ 1.16
PCOLCE-208ENST00000487172 PTPDC1A2A3K4 754 aa22.31■■□□□ 1.16
PCOLCE-208ENST00000487172 POTEB2H3BUK9 544 aa22.31■■□□□ 1.16
PCOLCE-208ENST00000487172 PGK2P07205 417 aa22.31■■□□□ 1.16
PCOLCE-208ENST00000487172 HSD17B4P51659 736 aa22.31■■□□□ 1.16
PCOLCE-208ENST00000487172 NAPAP54920 295 aa22.31■■□□□ 1.16
PCOLCE-208ENST00000487172 HMGN5P82970 282 aaKnown RBP22.31■■□□□ 1.16
PCOLCE-208ENST00000487172 CUL4AQ13619 759 aa22.31■■□□□ 1.16
PCOLCE-208ENST00000487172 TYW1BQ6NUM6 668 aa22.31■■□□□ 1.16
PCOLCE-208ENST00000487172 FBXO46Q6PJ61 603 aaPredicted RBP22.31■■□□□ 1.16
PCOLCE-208ENST00000487172 TRMT44Q8IYL2 757 aaKnown RBP22.31■■□□□ 1.16
PCOLCE-208ENST00000487172 NPLOC4Q8TAT6 608 aa22.31■■□□□ 1.16
PCOLCE-208ENST00000487172 RAET1EQ8TD07 263 aa22.31■■□□□ 1.16
PCOLCE-208ENST00000487172 WASF1Q92558 559 aa22.31■■□□□ 1.16
PCOLCE-208ENST00000487172 PLXNA1Q9UIW2 1896 aa22.3■■□□□ 1.16
PCOLCE-208ENST00000487172 ESYT2A0FGR8 921 aa22.3■■□□□ 1.16
PCOLCE-208ENST00000487172 GCOM1H8Y6P7 765 aaPredicted RBP22.3■■□□□ 1.16
PCOLCE-208ENST00000487172 K7ELQ4 463 aaPredicted RBP22.3■■□□□ 1.16
PCOLCE-208ENST00000487172 PIK3CDO00329 1044 aa22.3■■□□□ 1.16
PCOLCE-208ENST00000487172 CFBP00751 764 aa22.3■■□□□ 1.16
PCOLCE-208ENST00000487172 POLR2MP0CAP2 368 aa22.3■■□□□ 1.16
PCOLCE-208ENST00000487172 ZNF467Q7Z7K2 595 aaPredicted RBP22.3■■□□□ 1.16
PCOLCE-208ENST00000487172 ZMYND12Q9H0C1 365 aa22.3■■□□□ 1.16
PCOLCE-208ENST00000487172 GLT8D2Q9H1C3 349 aa22.3■■□□□ 1.16
PCOLCE-208ENST00000487172 PSTPIP2Q9H939 334 aa22.3■■□□□ 1.16
PCOLCE-208ENST00000487172 PTCH2Q9Y6C5 1203 aa22.3■■□□□ 1.16
PCOLCE-208ENST00000487172 LOC102724159A0A0B4J2E5 919 aa22.29■■□□□ 1.16
PCOLCE-208ENST00000487172 SMCO2A6NFE2 343 aa22.29■■□□□ 1.16
PCOLCE-208ENST00000487172 JAK2O60674 1132 aa22.29■■□□□ 1.16
PCOLCE-208ENST00000487172 IGHA2P01877 340 aa22.29■■□□□ 1.16
PCOLCE-208ENST00000487172 PWP2Q15269 919 aaKnown RBP22.29■■□□□ 1.16
PCOLCE-208ENST00000487172 SLC30A10Q6XR72 485 aa22.29■■□□□ 1.16
PCOLCE-208ENST00000487172 MSL3Q8N5Y2 521 aaKnown RBP22.29■■□□□ 1.16
PCOLCE-208ENST00000487172 CCDC148Q8NFR7 591 aa22.29■■□□□ 1.16
PCOLCE-208ENST00000487172 SYTL5Q8TDW5 730 aaPredicted RBP22.29■■□□□ 1.16
PCOLCE-208ENST00000487172 MAML3Q96JK9 1138 aa22.29■■□□□ 1.16
PCOLCE-208ENST00000487172 RIC8AQ9NPQ8 531 aa22.29■■□□□ 1.16
PCOLCE-208ENST00000487172 MEIS2O14770 477 aa22.28■■□□□ 1.16
PCOLCE-208ENST00000487172 ADCY3O60266 1144 aa22.28■■□□□ 1.16
PCOLCE-208ENST00000487172 CALML3P27482 149 aa22.28■■□□□ 1.16
PCOLCE-208ENST00000487172 MRPL12P52815 198 aaKnown RBP22.28■■□□□ 1.16
PCOLCE-208ENST00000487172 OLFML2BQ68BL8 750 aa22.28■■□□□ 1.16
PCOLCE-208ENST00000487172 SLAIN1Q8ND83 568 aa22.28■■□□□ 1.16
PCOLCE-208ENST00000487172 DNERQ8NFT8 737 aa22.28■■□□□ 1.16
PCOLCE-208ENST00000487172 CUL5Q93034 780 aa22.28■■□□□ 1.16
PCOLCE-208ENST00000487172 ADD3Q9UEY8 706 aaKnown RBP22.28■■□□□ 1.16
PCOLCE-208ENST00000487172 ZSCAN21Q9Y5A6 473 aaPredicted RBP22.28■■□□□ 1.16
PCOLCE-208ENST00000487172 LCTP09848 1927 aa22.27■■□□□ 1.16
PCOLCE-208ENST00000487172 SOWAHBA6NEL2 793 aa22.27■■□□□ 1.16
PCOLCE-208ENST00000487172 XBP1P17861 261 aa22.27■■□□□ 1.16
PCOLCE-208ENST00000487172 GNA11P29992 359 aa22.27■■□□□ 1.16
PCOLCE-208ENST00000487172 CNTN2Q02246 1040 aa22.27■■□□□ 1.16
PCOLCE-208ENST00000487172 MAMDC4Q6UXC1 1216 aa22.27■■□□□ 1.16
PCOLCE-208ENST00000487172 HSCBQ8IWL3 235 aa22.27■■□□□ 1.16
PCOLCE-208ENST00000487172 SHISA4Q96DD7 197 aa22.27■■□□□ 1.16
PCOLCE-208ENST00000487172 FGD4Q96M96 766 aa22.27■■□□□ 1.16
PCOLCE-208ENST00000487172 AIFM3Q96NN9 605 aa22.27■■□□□ 1.16
PCOLCE-208ENST00000487172 C6orf50Q9HD87 102 aa22.27■■□□□ 1.16
PCOLCE-208ENST00000487172 VPS54Q9P1Q0 977 aa22.27■■□□□ 1.16
PCOLCE-208ENST00000487172 DTNBO60941 627 aa22.26■■□□□ 1.15
PCOLCE-208ENST00000487172 GRK4P32298 578 aa22.26■■□□□ 1.15
PCOLCE-208ENST00000487172 CCL14Q16627 93 aa22.26■■□□□ 1.15
PCOLCE-208ENST00000487172 ALG1Q9BT22 464 aa22.26■■□□□ 1.15
PCOLCE-208ENST00000487172 COL20A1Q9P218 1284 aa22.26■■□□□ 1.15
PCOLCE-208ENST00000487172 HOXA13P31271 388 aaPredicted RBP22.25■■□□□ 1.15
PCOLCE-208ENST00000487172 ADCY7P51828 1080 aa22.25■■□□□ 1.15
PCOLCE-208ENST00000487172 GALNT17Q6IS24 598 aa22.25■■□□□ 1.15
PCOLCE-208ENST00000487172 USP17L6PQ6QN14 398 aa22.25■■□□□ 1.15
PCOLCE-208ENST00000487172 MORC4Q8TE76 937 aa22.25■■□□□ 1.15
PCOLCE-208ENST00000487172 TRIB2Q92519 343 aa22.25■■□□□ 1.15
PCOLCE-208ENST00000487172 INTS4Q96HW7 963 aaKnown RBP22.25■■□□□ 1.15
PCOLCE-208ENST00000487172 TAAR1Q96RJ0 339 aa22.25■■□□□ 1.15
PCOLCE-208ENST00000487172 TINF2Q9BSI4 451 aa22.25■■□□□ 1.15
PCOLCE-208ENST00000487172 FLRT1Q9NZU1 646 aa22.25■■□□□ 1.15
PCOLCE-208ENST00000487172 ASTN1O14525 1302 aa22.25■■□□□ 1.15
PCOLCE-208ENST00000487172 ASB14A6NK59 587 aa22.24■■□□□ 1.15
PCOLCE-208ENST00000487172 CLK2P49760 499 aaKnown RBP22.24■■□□□ 1.15
PCOLCE-208ENST00000487172 ALDH5A1P51649 535 aaPredicted RBP22.24■■□□□ 1.15
PCOLCE-208ENST00000487172 NLRP5P59047 1200 aa22.24■■□□□ 1.15
PCOLCE-208ENST00000487172 MCTP2Q6DN12 878 aa22.24■■□□□ 1.15
PCOLCE-208ENST00000487172 BICD2Q8TD16 824 aa22.24■■□□□ 1.15
PCOLCE-208ENST00000487172 NSUN6Q8TEA1 469 aaKnown RBP22.24■■□□□ 1.15
PCOLCE-208ENST00000487172 PURBQ96QR8 312 aaKnown RBP22.24■■□□□ 1.15
PCOLCE-208ENST00000487172 MCOLN1Q9GZU1 580 aa22.24■■□□□ 1.15
PCOLCE-208ENST00000487172 SYNGAP1Q96PV0 1343 aa22.24■■□□□ 1.15
PCOLCE-208ENST00000487172 B4DLN1 442 aa22.23■■□□□ 1.15
PCOLCE-208ENST00000487172 FOSP01100 380 aaPredicted RBP22.23■■□□□ 1.15
PCOLCE-208ENST00000487172 HMGCRP04035 888 aa22.23■■□□□ 1.15
PCOLCE-208ENST00000487172 ELNP15502 786 aa22.23■■□□□ 1.15
PCOLCE-208ENST00000487172 MFSD14CQ5VZR4 134 aa22.23■■□□□ 1.15
PCOLCE-208ENST00000487172 FAM184AQ8NB25 1140 aa22.23■■□□□ 1.15
PCOLCE-208ENST00000487172 DAGLBQ8NCG7 672 aa22.23■■□□□ 1.15
PCOLCE-208ENST00000487172 RMDN3Q96TC7 470 aa22.23■■□□□ 1.15
PCOLCE-208ENST00000487172 MPHOSPH6Q99547 160 aaKnown RBP22.23■■□□□ 1.15
PCOLCE-208ENST00000487172 PHF20Q9BVI0 1012 aa22.23■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 87.9 ms