RNA–Protein interactions for RNA: ENST00000477243.1

HMGN4-202, Transcript of high mobility group nucleosomal binding domain 4, humanhuman

TSL 3

Gene HMGN4, Length 113 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN4-202ENST00000477243 EMILIN2Q9BXX0 1053 aa3.4□□□□□ -1.87
HMGN4-202ENST00000477243 FHDC1Q9C0D6 1143 aaPredicted RBP3.4□□□□□ -1.87
HMGN4-202ENST00000477243 RNF38Q9H0F5 515 aa3.4□□□□□ -1.87
HMGN4-202ENST00000477243 MYLK2Q9H1R3 596 aa3.4□□□□□ -1.87
HMGN4-202ENST00000477243 TRIM39Q9HCM9 518 aa3.4□□□□□ -1.87
HMGN4-202ENST00000477243 ARHGEF4Q9NR80 690 aa3.4□□□□□ -1.87
HMGN4-202ENST00000477243 HELLSQ9NRZ9 838 aa3.4□□□□□ -1.87
HMGN4-202ENST00000477243 TBC1D22BQ9NU19 505 aa3.4□□□□□ -1.87
HMGN4-202ENST00000477243 ZDHHC3Q9NYG2 299 aa3.4□□□□□ -1.87
HMGN4-202ENST00000477243 ARHGAP28Q9P2N2 729 aa3.4□□□□□ -1.87
HMGN4-202ENST00000477243 ABCF2Q9UG63 623 aa3.4□□□□□ -1.87
HMGN4-202ENST00000477243 KCNG1Q9UIX4 513 aa3.4□□□□□ -1.87
HMGN4-202ENST00000477243 HPS5Q9UPZ3 1129 aa3.4□□□□□ -1.87
HMGN4-202ENST00000477243 PTPN22Q9Y2R2 807 aa3.4□□□□□ -1.87
HMGN4-202ENST00000477243 PCDHB5Q9Y5E4 795 aa3.4□□□□□ -1.87
HMGN4-202ENST00000477243 RUSC2Q8N2Y8 1516 aa3.39□□□□□ -1.87
HMGN4-202ENST00000477243 A0A1B0GTL3 188 aa3.39□□□□□ -1.87
HMGN4-202ENST00000477243 ANKRD18BA2A2Z9 1011 aa3.39□□□□□ -1.87
HMGN4-202ENST00000477243 A6NCN8 305 aa3.39□□□□□ -1.87
HMGN4-202ENST00000477243 SOWAHBA6NEL2 793 aa3.39□□□□□ -1.87
HMGN4-202ENST00000477243 GOLGA8CPA6NN73 597 aa3.39□□□□□ -1.87
HMGN4-202ENST00000477243 VAMP4O75379 141 aa3.39□□□□□ -1.87
HMGN4-202ENST00000477243 PRKD3O94806 890 aa3.39□□□□□ -1.87
HMGN4-202ENST00000477243 MBD4O95243 580 aa3.39□□□□□ -1.87
HMGN4-202ENST00000477243 MAP3K6O95382 1288 aa3.39□□□□□ -1.87
HMGN4-202ENST00000477243 ZBED1O96006 694 aa3.39□□□□□ -1.87
HMGN4-202ENST00000477243 ASGR2P07307 311 aa3.39□□□□□ -1.87
HMGN4-202ENST00000477243 NCAM1P13591 858 aa3.39□□□□□ -1.87
HMGN4-202ENST00000477243 NAT1P18440 290 aa3.39□□□□□ -1.87
HMGN4-202ENST00000477243 NME2P22392 152 aa3.39□□□□□ -1.87
HMGN4-202ENST00000477243 FSHRP23945 695 aa3.39□□□□□ -1.87
HMGN4-202ENST00000477243 ADD1P35611 737 aaKnown RBP3.39□□□□□ -1.87
HMGN4-202ENST00000477243 TXLNAP40222 546 aa3.39□□□□□ -1.87
HMGN4-202ENST00000477243 PBX2P40425 430 aa3.39□□□□□ -1.87
HMGN4-202ENST00000477243 PTPN5P54829 565 aa3.39□□□□□ -1.87
HMGN4-202ENST00000477243 NAP1L1P55209 391 aaKnown RBP3.39□□□□□ -1.87
HMGN4-202ENST00000477243 SFSWAPQ12872 951 aaKnown RBP3.39□□□□□ -1.87
HMGN4-202ENST00000477243 NR5A1Q13285 461 aa3.39□□□□□ -1.87
HMGN4-202ENST00000477243 TRIM14Q14142 442 aa3.39□□□□□ -1.87
HMGN4-202ENST00000477243 SEPT2Q15019 361 aa3.39□□□□□ -1.87
HMGN4-202ENST00000477243 TERF2Q15554 542 aa3.39□□□□□ -1.87
HMGN4-202ENST00000477243 ABCB5Q2M3G0 1257 aa3.39□□□□□ -1.87
HMGN4-202ENST00000477243 INAVAQ3KP66 663 aa3.39□□□□□ -1.87
HMGN4-202ENST00000477243 PPP1R26Q5T8A7 1209 aaPredicted RBP3.39□□□□□ -1.87
HMGN4-202ENST00000477243 RETSATQ6NUM9 610 aa3.39□□□□□ -1.87
HMGN4-202ENST00000477243 XRRA1Q6P2D8 792 aa3.39□□□□□ -1.87
HMGN4-202ENST00000477243 IGF2-ASQ6U949 168 aa3.39□□□□□ -1.87
HMGN4-202ENST00000477243 C16orf54Q6UWD8 224 aa3.39□□□□□ -1.87
HMGN4-202ENST00000477243 OTOP3Q7RTS5 596 aa3.39□□□□□ -1.87
HMGN4-202ENST00000477243 DPP9Q86TI2 863 aa3.39□□□□□ -1.87
HMGN4-202ENST00000477243 C11orf74Q86VG3 221 aa3.39□□□□□ -1.87
HMGN4-202ENST00000477243 LMNTD2Q8IXW0 634 aa3.39□□□□□ -1.87
HMGN4-202ENST00000477243 NDUFAF2Q8N183 169 aa3.39□□□□□ -1.87
HMGN4-202ENST00000477243 DEPTORQ8TB45 409 aa3.39□□□□□ -1.87
HMGN4-202ENST00000477243 C7orf43Q8WVR3 580 aa3.39□□□□□ -1.87
HMGN4-202ENST00000477243 FERMT2Q96AC1 680 aa3.39□□□□□ -1.87
HMGN4-202ENST00000477243 AHCYL2Q96HN2 611 aaKnown RBP3.39□□□□□ -1.87
HMGN4-202ENST00000477243 SGCZQ96LD1 299 aa3.39□□□□□ -1.87
HMGN4-202ENST00000477243 DHRS1Q96LJ7 313 aa3.39□□□□□ -1.87
HMGN4-202ENST00000477243 LRGUKQ96M69 825 aa3.39□□□□□ -1.87
HMGN4-202ENST00000477243 CNTNAP3BQ96NU0 1288 aa3.39□□□□□ -1.87
HMGN4-202ENST00000477243 LSM14BQ9BX40 385 aaKnown RBP3.39□□□□□ -1.87
HMGN4-202ENST00000477243 CNTNAP3Q9BZ76 1288 aa3.39□□□□□ -1.87
HMGN4-202ENST00000477243 OSBPL5Q9H0X9 879 aaPredicted RBP3.39□□□□□ -1.87
HMGN4-202ENST00000477243 ANLNQ9NQW6 1124 aa3.39□□□□□ -1.87
HMGN4-202ENST00000477243 SH3GLB2Q9NR46 395 aa3.39□□□□□ -1.87
HMGN4-202ENST00000477243 LATS2Q9NRM7 1088 aa3.39□□□□□ -1.87
HMGN4-202ENST00000477243 PDP2Q9P2J9 529 aa3.39□□□□□ -1.87
HMGN4-202ENST00000477243 NDOR1Q9UHB4 597 aa3.39□□□□□ -1.87
HMGN4-202ENST00000477243 GPN3Q9UHW5 284 aaPredicted RBP3.39□□□□□ -1.87
HMGN4-202ENST00000477243 SALL4Q9UJQ4 1053 aa3.39□□□□□ -1.87
HMGN4-202ENST00000477243 DIS3Q9Y2L1 958 aaKnown RBP3.39□□□□□ -1.87
HMGN4-202ENST00000477243 GJA3Q9Y6H8 435 aa3.39□□□□□ -1.87
HMGN4-202ENST00000477243 CAMSAP1Q5T5Y3 1602 aa3.39□□□□□ -1.87
HMGN4-202ENST00000477243 MAP3K4Q9Y6R4 1608 aa3.39□□□□□ -1.87
HMGN4-202ENST00000477243 PRR36Q9H6K5 1346 aa3.39□□□□□ -1.87
HMGN4-202ENST00000477243 MAP3K5Q99683 1374 aa3.38□□□□□ -1.87
HMGN4-202ENST00000477243 DNAH12Q6ZR08 3092 aa3.38□□□□□ -1.87
HMGN4-202ENST00000477243 FHAD1B1AJZ9 1412 aa3.38□□□□□ -1.87
HMGN4-202ENST00000477243 NAV3Q8IVL0 2385 aa3.38□□□□□ -1.87
HMGN4-202ENST00000477243 KALRNO60229 2985 aa3.38□□□□□ -1.87
HMGN4-202ENST00000477243 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP3.38□□□□□ -1.87
HMGN4-202ENST00000477243 ANKRD34BA5PLL1 514 aa3.38□□□□□ -1.87
HMGN4-202ENST00000477243 KLHL33A6NCF5 533 aa3.38□□□□□ -1.87
HMGN4-202ENST00000477243 ENO4A6NNW6 628 aa3.38□□□□□ -1.87
HMGN4-202ENST00000477243 GOLGA6L6A8MZA4 724 aa3.38□□□□□ -1.87
HMGN4-202ENST00000477243 TK2O00142 265 aa3.38□□□□□ -1.87
HMGN4-202ENST00000477243 SNPHO15079 494 aa3.38□□□□□ -1.87
HMGN4-202ENST00000477243 PLOD3O60568 738 aa3.38□□□□□ -1.87
HMGN4-202ENST00000477243 GAS7O60861 476 aa3.38□□□□□ -1.87
HMGN4-202ENST00000477243 HMMRO75330 724 aa3.38□□□□□ -1.87
HMGN4-202ENST00000477243 OFD1O75665 1012 aa3.38□□□□□ -1.87
HMGN4-202ENST00000477243 BAIAP3O94812 1187 aa3.38□□□□□ -1.87
HMGN4-202ENST00000477243 ZIC2O95409 532 aaPredicted RBP3.38□□□□□ -1.87
HMGN4-202ENST00000477243 DDX58O95786 925 aaKnown RBP3.38□□□□□ -1.87
HMGN4-202ENST00000477243 IFIT1P09914 478 aaKnown RBP3.38□□□□□ -1.87
HMGN4-202ENST00000477243 PABPC1P11940 636 aaKnown RBP3.38□□□□□ -1.87
HMGN4-202ENST00000477243 BMP6P22004 513 aa3.38□□□□□ -1.87
HMGN4-202ENST00000477243 RPS6KB1P23443 525 aa3.38□□□□□ -1.87
HMGN4-202ENST00000477243 OAS2P29728 719 aaKnown RBP3.38□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms