RNA–Protein interactions for RNA: ENST00000475716.5

SNX5-208, Transcript of sorting nexin 5, humanhuman

TSL 3

Gene SNX5, Length 715 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX5-208ENST00000475716 SLFN13Q68D06 897 aa11.93□□□□□ -0.5
SNX5-208ENST00000475716 ITPRIPQ8IWB1 547 aa11.93□□□□□ -0.5
SNX5-208ENST00000475716 CEP95Q96GE4 821 aa11.93□□□□□ -0.5
SNX5-208ENST00000475716 DDRGK1Q96HY6 314 aa11.93□□□□□ -0.5
SNX5-208ENST00000475716 PHOX2BQ99453 314 aa11.93□□□□□ -0.5
SNX5-208ENST00000475716 USP34Q70CQ2 3546 aa11.92□□□□□ -0.5
SNX5-208ENST00000475716 POTEB3A0JP26 581 aa11.92□□□□□ -0.5
SNX5-208ENST00000475716 GRXCR2A6NFK2 248 aa11.92□□□□□ -0.5
SNX5-208ENST00000475716 IFIT2P09913 472 aaKnown RBP11.92□□□□□ -0.5
SNX5-208ENST00000475716 BMP3P12645 472 aa11.92□□□□□ -0.5
SNX5-208ENST00000475716 DEFB103AP81534 67 aa11.92□□□□□ -0.5
SNX5-208ENST00000475716 UBE3CQ15386 1083 aa11.92□□□□□ -0.5
SNX5-208ENST00000475716 CSPP1Q1MSJ5 1256 aa11.92□□□□□ -0.5
SNX5-208ENST00000475716 DUSP28Q4G0W2 176 aa11.92□□□□□ -0.5
SNX5-208ENST00000475716 SBK1Q52WX2 424 aa11.92□□□□□ -0.5
SNX5-208ENST00000475716 PTCRAQ6ISU1 281 aaPredicted RBP11.92□□□□□ -0.5
SNX5-208ENST00000475716 POTEBQ6S5H4 581 aa11.92□□□□□ -0.5
SNX5-208ENST00000475716 STRBPQ96SI9 672 aaKnown RBP11.92□□□□□ -0.5
SNX5-208ENST00000475716 MTG1Q9BT17 334 aaPredicted RBP11.92□□□□□ -0.5
SNX5-208ENST00000475716 ZBED2Q9BTP6 218 aa11.92□□□□□ -0.5
SNX5-208ENST00000475716 WDR11Q9BZH6 1224 aa11.92□□□□□ -0.5
SNX5-208ENST00000475716 POLR3EQ9NVU0 708 aa11.92□□□□□ -0.5
SNX5-208ENST00000475716 MTMR4Q9NYA4 1195 aa11.92□□□□□ -0.5
SNX5-208ENST00000475716 CYP39A1Q9NYL5 469 aa11.92□□□□□ -0.5
SNX5-208ENST00000475716 TRIOO75962 3097 aa11.92□□□□□ -0.5
SNX5-208ENST00000475716 GSG1L2A8MUP6 293 aa11.91□□□□□ -0.5
SNX5-208ENST00000475716 CHMP4BP1P59074 171 aa11.91□□□□□ -0.5
SNX5-208ENST00000475716 ERVK-21P61565 698 aa11.91□□□□□ -0.5
SNX5-208ENST00000475716 WDR5P61964 334 aaKnown RBP11.91□□□□□ -0.5
SNX5-208ENST00000475716 ZNF444Q8N0Y2 327 aaPredicted RBP11.91□□□□□ -0.5
SNX5-208ENST00000475716 CLASRPQ8N2M8 674 aaKnown RBP11.91□□□□□ -0.5
SNX5-208ENST00000475716 VTA1Q9NP79 307 aa11.91□□□□□ -0.5
SNX5-208ENST00000475716 GPHNQ9NQX3 736 aaPredicted RBP11.91□□□□□ -0.5
SNX5-208ENST00000475716 ISY1Q9ULR0 285 aaKnown RBP11.91□□□□□ -0.5
SNX5-208ENST00000475716 TET1Q8NFU7 2136 aa11.9□□□□□ -0.5
SNX5-208ENST00000475716 MYH8P13535 1937 aa11.9□□□□□ -0.5
SNX5-208ENST00000475716 H3BQ06 376 aaPredicted RBP11.9□□□□□ -0.5
SNX5-208ENST00000475716 PITPNM1O00562 1244 aa11.9□□□□□ -0.5
SNX5-208ENST00000475716 DCXO43602 365 aa11.9□□□□□ -0.5
SNX5-208ENST00000475716 BAIAP3O94812 1187 aa11.9□□□□□ -0.5
SNX5-208ENST00000475716 ATP5JP18859 108 aa11.9□□□□□ -0.5
SNX5-208ENST00000475716 MCCP23508 829 aa11.9□□□□□ -0.5
SNX5-208ENST00000475716 KCNJ6P48051 423 aa11.9□□□□□ -0.5
SNX5-208ENST00000475716 FAM117BQ6P1L5 589 aa11.9□□□□□ -0.5
SNX5-208ENST00000475716 NSMFQ6X4W1 530 aa11.9□□□□□ -0.5
SNX5-208ENST00000475716 HFE2Q6ZVN8 426 aa11.9□□□□□ -0.5
SNX5-208ENST00000475716 GMCL1P1Q8NEA9 526 aa11.9□□□□□ -0.5
SNX5-208ENST00000475716 OR6J1Q8NGC5 347 aa11.9□□□□□ -0.5
SNX5-208ENST00000475716 MORC4Q8TE76 937 aa11.9□□□□□ -0.5
SNX5-208ENST00000475716 STAG1Q8WVM7 1258 aa11.9□□□□□ -0.5
SNX5-208ENST00000475716 COPS5Q92905 334 aa11.9□□□□□ -0.5
SNX5-208ENST00000475716 HAUS7Q99871 368 aa11.9□□□□□ -0.5
SNX5-208ENST00000475716 DDX24Q9GZR7 859 aaKnown RBP eCLIP11.9□□□□□ -0.54e-12■■□□□ 13.2
SNX5-208ENST00000475716 ARPP21Q9UBL0 812 aaPredicted RBP11.9□□□□□ -0.5
SNX5-208ENST00000475716 RBM47A0AV96 593 aaKnown RBP11.89□□□□□ -0.51
SNX5-208ENST00000475716 LINC01553A4QN01 128 aa11.89□□□□□ -0.51
SNX5-208ENST00000475716 TTLL1O95922 423 aa11.89□□□□□ -0.51
SNX5-208ENST00000475716 FDX1P10109 184 aa11.89□□□□□ -0.51
SNX5-208ENST00000475716 CPT1AP50416 773 aa11.89□□□□□ -0.51
SNX5-208ENST00000475716 IKQ13123 557 aaPredicted RBP11.89□□□□□ -0.51
SNX5-208ENST00000475716 BFSP2Q13515 415 aa11.89□□□□□ -0.51
SNX5-208ENST00000475716 BAATQ14032 418 aaPredicted RBP11.89□□□□□ -0.51
SNX5-208ENST00000475716 TKFCQ3LXA3 575 aa11.89□□□□□ -0.51
SNX5-208ENST00000475716 NFRKBQ6P4R8 1299 aa11.89□□□□□ -0.51
SNX5-208ENST00000475716 KCTD1Q719H9 257 aa11.89□□□□□ -0.51
SNX5-208ENST00000475716 RASGRP2Q7LDG7 609 aa11.89□□□□□ -0.51
SNX5-208ENST00000475716 RPAP2Q8IXW5 612 aaPredicted RBP11.89□□□□□ -0.51
SNX5-208ENST00000475716 NEK9Q8TD19 979 aa11.89□□□□□ -0.51
SNX5-208ENST00000475716 CHURC1Q8WUH1 139 aa11.89□□□□□ -0.51
SNX5-208ENST00000475716 TGS1Q96RS0 853 aaKnown RBP11.89□□□□□ -0.51
SNX5-208ENST00000475716 CTAGE1Q96RT6 745 aa11.89□□□□□ -0.51
SNX5-208ENST00000475716 RAD9AQ99638 391 aa11.89□□□□□ -0.51
SNX5-208ENST00000475716 C17orf80Q9BSJ5 609 aa11.89□□□□□ -0.51
SNX5-208ENST00000475716 NBNO60934 754 aa11.88□□□□□ -0.51
SNX5-208ENST00000475716 GJB5O95377 273 aa11.88□□□□□ -0.51
SNX5-208ENST00000475716 STAT2P52630 851 aa11.88□□□□□ -0.51
SNX5-208ENST00000475716 PTGISQ16647 500 aa11.88□□□□□ -0.51
SNX5-208ENST00000475716 HSP90AB4PQ58FF6 505 aa11.88□□□□□ -0.51
SNX5-208ENST00000475716 FTSJ3Q8IY81 847 aaKnown RBP11.88□□□□□ -0.51
SNX5-208ENST00000475716 KIF1BPQ96EK5 621 aa11.88□□□□□ -0.51
SNX5-208ENST00000475716 PRR12Q9ULL5 1215 aa11.88□□□□□ -0.51
SNX5-208ENST00000475716 NOD1Q9Y239 953 aa11.88□□□□□ -0.51
SNX5-208ENST00000475716 A6NJR5 290 aa11.87□□□□□ -0.51
SNX5-208ENST00000475716 SLC1A4P43007 532 aa11.87□□□□□ -0.51
SNX5-208ENST00000475716 ALDH5A1P51649 535 aaPredicted RBP11.87□□□□□ -0.51
SNX5-208ENST00000475716 GDF6Q6KF10 455 aaPredicted RBP11.87□□□□□ -0.51
SNX5-208ENST00000475716 LIN28BQ6ZN17 250 aaKnown RBP eCLIP11.87□□□□□ -0.51
SNX5-208ENST00000475716 FAM160B2Q86V87 743 aa11.87□□□□□ -0.51
SNX5-208ENST00000475716 SIRT2Q8IXJ6 389 aa11.87□□□□□ -0.51
SNX5-208ENST00000475716 NEDD1Q8NHV4 660 aa11.87□□□□□ -0.51
SNX5-208ENST00000475716 DHX38Q92620 1227 aaKnown RBP11.87□□□□□ -0.51
SNX5-208ENST00000475716 OSBP2Q969R2 916 aa11.87□□□□□ -0.51
SNX5-208ENST00000475716 KCNH6Q9H252 994 aa11.87□□□□□ -0.51
SNX5-208ENST00000475716 EPB41L4AQ9HCS5 686 aaPredicted RBP11.87□□□□□ -0.51
SNX5-208ENST00000475716 GREB1LQ9C091 1923 aaPredicted RBP11.87□□□□□ -0.51
SNX5-208ENST00000475716 C5orf42Q9H799 3197 aa11.87□□□□□ -0.51
SNX5-208ENST00000475716 C19orf67A6NJJ6 358 aa11.86□□□□□ -0.51
SNX5-208ENST00000475716 TFAP4Q01664 338 aa11.86□□□□□ -0.51
SNX5-208ENST00000475716 ZP2Q05996 745 aa11.86□□□□□ -0.51
SNX5-208ENST00000475716 PTPN11Q06124 597 aaPredicted RBP11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 99.9 ms