RNA–Protein interactions for RNA: ENST00000467378.1

USP11-205, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 3

Gene USP11, Length 696 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-205ENST00000467378 CALM3P0DP25 149 aa22.23■■□□□ 1.15
USP11-205ENST00000467378 ADORA2AP29274 412 aa22.23■■□□□ 1.15
USP11-205ENST00000467378 FGD1P98174 961 aa22.23■■□□□ 1.15
USP11-205ENST00000467378 TOB2Q14106 344 aaPredicted RBP22.23■■□□□ 1.15
USP11-205ENST00000467378 PRAMEF19Q5SWL8 479 aa22.23■■□□□ 1.15
USP11-205ENST00000467378 C1orf53Q5VUE5 145 aa22.23■■□□□ 1.15
USP11-205ENST00000467378 APOA5Q6Q788 366 aa22.23■■□□□ 1.15
USP11-205ENST00000467378 BRF1Q92994 677 aa22.23■■□□□ 1.15
USP11-205ENST00000467378 MOV10L1Q9BXT6 1211 aaKnown RBP22.23■■□□□ 1.15
USP11-205ENST00000467378 RANBP17Q9H2T7 1088 aaKnown RBP22.23■■□□□ 1.15
USP11-205ENST00000467378 KLRF2D3W0D1 207 aa22.22■■□□□ 1.15
USP11-205ENST00000467378 STAT3P40763 770 aa22.22■■□□□ 1.15
USP11-205ENST00000467378 SNAP25P60880 206 aa22.22■■□□□ 1.15
USP11-205ENST00000467378 FPGSQ05932 587 aa22.22■■□□□ 1.15
USP11-205ENST00000467378 APOBRQ0VD83 1088 aa22.22■■□□□ 1.15
USP11-205ENST00000467378 PLS1Q14651 629 aa22.22■■□□□ 1.15
USP11-205ENST00000467378 ATXN2LQ8WWM7 1075 aaKnown RBP22.22■■□□□ 1.15
USP11-205ENST00000467378 GAS2L1Q99501 681 aaPredicted RBP22.22■■□□□ 1.15
USP11-205ENST00000467378 KIF2CQ99661 725 aa22.22■■□□□ 1.15
USP11-205ENST00000467378 ALDH8A1Q9H2A2 487 aaPredicted RBP22.22■■□□□ 1.15
USP11-205ENST00000467378 PDRG1Q9NUG6 133 aa22.22■■□□□ 1.15
USP11-205ENST00000467378 NCOR1O75376 2440 aa22.22■■□□□ 1.15
USP11-205ENST00000467378 ZNF536O15090 1300 aa22.22■■□□□ 1.15
USP11-205ENST00000467378 KLF18A0A0U1RQI7 1052 aa22.21■■□□□ 1.15
USP11-205ENST00000467378 RXRAP19793 462 aa22.21■■□□□ 1.15
USP11-205ENST00000467378 OAZ1P54368 228 aa22.21■■□□□ 1.15
USP11-205ENST00000467378 EVCP57679 992 aa22.21■■□□□ 1.15
USP11-205ENST00000467378 SYNE3Q6ZMZ3 975 aa22.21■■□□□ 1.15
USP11-205ENST00000467378 RAB11FIP4Q86YS3 637 aa22.21■■□□□ 1.15
USP11-205ENST00000467378 RIOX2Q8IUF8 465 aa22.21■■□□□ 1.15
USP11-205ENST00000467378 ADGRF4Q8IZF3 695 aa22.21■■□□□ 1.15
USP11-205ENST00000467378 SHCBP1Q8NEM2 672 aa22.21■■□□□ 1.15
USP11-205ENST00000467378 TIFAQ96CG3 184 aa22.21■■□□□ 1.15
USP11-205ENST00000467378 RAVER2Q9HCJ3 691 aaKnown RBP22.21■■□□□ 1.15
USP11-205ENST00000467378 THEGQ9P2T0 379 aa22.21■■□□□ 1.15
USP11-205ENST00000467378 BAZ2BQ9UIF8 2168 aaKnown RBP22.21■■□□□ 1.15
USP11-205ENST00000467378 TCF20Q9UGU0 1960 aaKnown RBP22.2■■□□□ 1.14
USP11-205ENST00000467378 STRNO43815 780 aa22.2■■□□□ 1.14
USP11-205ENST00000467378 SLC35G1Q2M3R5 365 aa22.2■■□□□ 1.14
USP11-205ENST00000467378 CPXCR1Q8N123 301 aa22.2■■□□□ 1.14
USP11-205ENST00000467378 FANCBQ8NB91 859 aa22.2■■□□□ 1.14
USP11-205ENST00000467378 CTCFLQ8NI51 663 aaPredicted RBP22.2■■□□□ 1.14
USP11-205ENST00000467378 ADAMTS19Q8TE59 1207 aa22.2■■□□□ 1.14
USP11-205ENST00000467378 UPF2Q9HAU5 1272 aaKnown RBP22.2■■□□□ 1.14
USP11-205ENST00000467378 SLC5A4Q9NY91 659 aa22.2■■□□□ 1.14
USP11-205ENST00000467378 RIPK3Q9Y572 518 aa22.2■■□□□ 1.14
USP11-205ENST00000467378 CTDP1Q9Y5B0 961 aaPredicted RBP22.2■■□□□ 1.14
USP11-205ENST00000467378 KIAA0355O15063 1070 aa22.19■■□□□ 1.14
USP11-205ENST00000467378 ZBTB43O43298 467 aa22.19■■□□□ 1.14
USP11-205ENST00000467378 PQBP1O60828 265 aaKnown RBP22.19■■□□□ 1.14
USP11-205ENST00000467378 SLC25A27O95847 323 aa22.19■■□□□ 1.14
USP11-205ENST00000467378 ERCC3P19447 782 aa22.19■■□□□ 1.14
USP11-205ENST00000467378 SNRNP48Q6IEG0 339 aaKnown RBP22.19■■□□□ 1.14
USP11-205ENST00000467378 CCDC174Q6PII3 467 aa22.19■■□□□ 1.14
USP11-205ENST00000467378 MICU3Q86XE3 530 aa22.19■■□□□ 1.14
USP11-205ENST00000467378 CCDC144CPQ8IYA2 1237 aa22.19■■□□□ 1.14
USP11-205ENST00000467378 ASB2Q96Q27 587 aa22.19■■□□□ 1.14
USP11-205ENST00000467378 TEX13BQ9BXU2 312 aa22.19■■□□□ 1.14
USP11-205ENST00000467378 RIOX1Q9H6W3 641 aa22.19■■□□□ 1.14
USP11-205ENST00000467378 JMJD4Q9H9V9 463 aa22.19■■□□□ 1.14
USP11-205ENST00000467378 PHF24Q9UPV7 400 aa22.19■■□□□ 1.14
USP11-205ENST00000467378 MUC3AQ02505 3323 aa22.18■■□□□ 1.14
USP11-205ENST00000467378 CYTH3O43739 400 aa22.18■■□□□ 1.14
USP11-205ENST00000467378 COBLO75128 1261 aa22.18■■□□□ 1.14
USP11-205ENST00000467378 SMARCA1P28370 1054 aa22.18■■□□□ 1.14
USP11-205ENST00000467378 KIF5BP33176 963 aa22.18■■□□□ 1.14
USP11-205ENST00000467378 RCAN1P53805 252 aa22.18■■□□□ 1.14
USP11-205ENST00000467378 IL27Q8NEV9 243 aa22.18■■□□□ 1.14
USP11-205ENST00000467378 MTMR8Q96EF0 704 aa22.18■■□□□ 1.14
USP11-205ENST00000467378 AGBL1Q96MI9 1066 aa22.18■■□□□ 1.14
USP11-205ENST00000467378 UHRF1Q96T88 793 aaPredicted RBP22.18■■□□□ 1.14
USP11-205ENST00000467378 MROH8Q9H579 483 aa22.18■■□□□ 1.14
USP11-205ENST00000467378 VAT1LQ9HCJ6 419 aa22.18■■□□□ 1.14
USP11-205ENST00000467378 XPNPEP3Q9NQH7 507 aa22.18■■□□□ 1.14
USP11-205ENST00000467378 TMEM39AQ9NV64 488 aa22.18■■□□□ 1.14
USP11-205ENST00000467378 NEK4P51957 841 aa22.17■■□□□ 1.14
USP11-205ENST00000467378 NCAPG2Q86XI2 1143 aa22.17■■□□□ 1.14
USP11-205ENST00000467378 TBC1D32Q96NH3 1257 aa22.17■■□□□ 1.14
USP11-205ENST00000467378 PRDM12Q9H4Q4 367 aa22.17■■□□□ 1.14
USP11-205ENST00000467378 FAM217BQ9NTX9 383 aaPredicted RBP22.17■■□□□ 1.14
USP11-205ENST00000467378 NID2Q14112 1375 aa22.16■■□□□ 1.14
USP11-205ENST00000467378 GBF1Q92538 1859 aa22.16■■□□□ 1.14
USP11-205ENST00000467378 PLEKHA8P1O95397 391 aa22.16■■□□□ 1.14
USP11-205ENST00000467378 ICAM1P05362 532 aa22.16■■□□□ 1.14
USP11-205ENST00000467378 RARBP10826 455 aa22.16■■□□□ 1.14
USP11-205ENST00000467378 PDIA3P30101 505 aaKnown RBP22.16■■□□□ 1.14
USP11-205ENST00000467378 COPB2P35606 906 aa22.16■■□□□ 1.14
USP11-205ENST00000467378 GNAQP50148 359 aa22.16■■□□□ 1.14
USP11-205ENST00000467378 MRPS5P82675 430 aaKnown RBP22.16■■□□□ 1.14
USP11-205ENST00000467378 CDC37Q16543 378 aaPredicted RBP22.16■■□□□ 1.14
USP11-205ENST00000467378 SRBD1Q8N5C6 995 aaKnown RBP22.16■■□□□ 1.14
USP11-205ENST00000467378 LZTS2Q9BRK4 669 aa22.16■■□□□ 1.14
USP11-205ENST00000467378 LARP6Q9BRS8 491 aaKnown RBP22.16■■□□□ 1.14
USP11-205ENST00000467378 GOLGA8AA7E2F4 631 aa22.15■■□□□ 1.14
USP11-205ENST00000467378 GOLGA8BA8MQT2 603 aa22.15■■□□□ 1.14
USP11-205ENST00000467378 DHX16O60231 1041 aaKnown RBP22.15■■□□□ 1.14
USP11-205ENST00000467378 CDC27P30260 824 aa22.15■■□□□ 1.14
USP11-205ENST00000467378 SLC4A3P48751 1232 aa22.15■■□□□ 1.14
USP11-205ENST00000467378 AK2P54819 239 aa22.15■■□□□ 1.14
USP11-205ENST00000467378 CCDC85BQ15834 202 aaPredicted RBP22.15■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms