RNA–Protein interactions for RNA: ENST00000462258.1

SF3A3-204, Transcript of splicing factor 3a subunit 3, humanhuman

TSL 2

Gene SF3A3, Length 527 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3-204ENST00000462258 ANO2Q9NQ90 1003 aa11.86□□□□□ -0.51
SF3A3-204ENST00000462258 PDLIM7Q9NR12 457 aa11.86□□□□□ -0.51
SF3A3-204ENST00000462258 MAD2L2Q9UI95 211 aa11.86□□□□□ -0.51
SF3A3-204ENST00000462258 PQBP1O60828 265 aaKnown RBP11.85□□□□□ -0.51
SF3A3-204ENST00000462258 ASGR1P07306 291 aa11.85□□□□□ -0.51
SF3A3-204ENST00000462258 ANTXR2P58335 489 aa11.85□□□□□ -0.51
SF3A3-204ENST00000462258 GRM4Q14833 912 aa11.85□□□□□ -0.51
SF3A3-204ENST00000462258 TMEM67Q5HYA8 995 aa11.85□□□□□ -0.51
SF3A3-204ENST00000462258 CCSAPQ6IQ19 270 aaPredicted RBP11.85□□□□□ -0.51
SF3A3-204ENST00000462258 TAPT1Q6NXT6 567 aa11.85□□□□□ -0.51
SF3A3-204ENST00000462258 FBXO11Q86XK2 927 aa11.85□□□□□ -0.51
SF3A3-204ENST00000462258 TDHQ8IZJ6 230 aa11.85□□□□□ -0.51
SF3A3-204ENST00000462258 NUP133Q8WUM0 1156 aa11.85□□□□□ -0.51
SF3A3-204ENST00000462258 CCDC136Q96JN2 1154 aa11.85□□□□□ -0.51
SF3A3-204ENST00000462258 GLT1D1Q96MS3 346 aa11.85□□□□□ -0.51
SF3A3-204ENST00000462258 MPHOSPH6Q99547 160 aaKnown RBP11.85□□□□□ -0.51
SF3A3-204ENST00000462258 LBHD1Q9BQE6 289 aaPredicted RBP11.85□□□□□ -0.51
SF3A3-204ENST00000462258 SENP2Q9HC62 589 aa11.85□□□□□ -0.51
SF3A3-204ENST00000462258 PDGFCQ9NRA1 345 aa11.85□□□□□ -0.51
SF3A3-204ENST00000462258 GNEQ9Y223 722 aaKnown RBP11.85□□□□□ -0.51
SF3A3-204ENST00000462258 BAZ2BQ9UIF8 2168 aaKnown RBP11.84□□□□□ -0.51
SF3A3-204ENST00000462258 PALM3A6NDB9 673 aaPredicted RBP11.84□□□□□ -0.51
SF3A3-204ENST00000462258 KLRF2D3W0D1 207 aa11.84□□□□□ -0.51
SF3A3-204ENST00000462258 SLC27A2O14975 620 aa11.84□□□□□ -0.51
SF3A3-204ENST00000462258 CTAGE5O15320 804 aa11.84□□□□□ -0.51
SF3A3-204ENST00000462258 CLTBP09497 229 aa11.84□□□□□ -0.51
SF3A3-204ENST00000462258 SMPD1P17405 629 aa11.84□□□□□ -0.51
SF3A3-204ENST00000462258 PTGS1P23219 599 aa11.84□□□□□ -0.51
SF3A3-204ENST00000462258 EDNRBP24530 442 aa11.84□□□□□ -0.51
SF3A3-204ENST00000462258 BEX3Q00994 111 aa11.84□□□□□ -0.51
SF3A3-204ENST00000462258 TLE2Q04725 743 aa11.84□□□□□ -0.51
SF3A3-204ENST00000462258 PDE4DQ08499 809 aa11.84□□□□□ -0.51
SF3A3-204ENST00000462258 GNASQ5JWF2 1037 aa11.84□□□□□ -0.51
SF3A3-204ENST00000462258 CASC1Q6TDU7 716 aa11.84□□□□□ -0.51
SF3A3-204ENST00000462258 CATIPQ7Z7H3 387 aa11.84□□□□□ -0.51
SF3A3-204ENST00000462258 HOMER1Q86YM7 354 aa11.84□□□□□ -0.51
SF3A3-204ENST00000462258 RGS22Q8NE09 1264 aa11.84□□□□□ -0.51
SF3A3-204ENST00000462258 DNERQ8NFT8 737 aa11.84□□□□□ -0.51
SF3A3-204ENST00000462258 VAT1LQ9HCJ6 419 aa11.84□□□□□ -0.51
SF3A3-204ENST00000462258 MRPL11Q9Y3B7 192 aaKnown RBP11.84□□□□□ -0.51
SF3A3-204ENST00000462258 ELP1O95163 1332 aa11.84□□□□□ -0.51
SF3A3-204ENST00000462258 A0A0U1RQG5 324 aaPredicted RBP11.83□□□□□ -0.52
SF3A3-204ENST00000462258 ZBTB5O15062 677 aa11.83□□□□□ -0.52
SF3A3-204ENST00000462258 PRC1O43663 620 aa11.83□□□□□ -0.52
SF3A3-204ENST00000462258 CDC45O75419 566 aa11.83□□□□□ -0.52
SF3A3-204ENST00000462258 NKX3-2P78367 333 aa11.83□□□□□ -0.52
SF3A3-204ENST00000462258 TROAPQ12815 778 aa11.83□□□□□ -0.52
SF3A3-204ENST00000462258 FSCN1Q16658 493 aaKnown RBP11.83□□□□□ -0.52
SF3A3-204ENST00000462258 CREB3L3Q68CJ9 461 aa11.83□□□□□ -0.52
SF3A3-204ENST00000462258 MCF2L2Q86YR7 1114 aa11.83□□□□□ -0.52
SF3A3-204ENST00000462258 MTMR8Q96EF0 704 aa11.83□□□□□ -0.52
SF3A3-204ENST00000462258 AMNQ9BXJ7 453 aa11.83□□□□□ -0.52
SF3A3-204ENST00000462258 MAF1Q9H063 256 aa11.83□□□□□ -0.52
SF3A3-204ENST00000462258 AP5M1Q9H0R1 490 aa11.83□□□□□ -0.52
SF3A3-204ENST00000462258 LY9Q9HBG7 655 aa11.83□□□□□ -0.52
SF3A3-204ENST00000462258 MROH7Q68CQ1 1323 aa11.83□□□□□ -0.52
SF3A3-204ENST00000462258 TRIM43BA6NCK2 446 aa11.82□□□□□ -0.52
SF3A3-204ENST00000462258 B4DLN1 442 aa11.82□□□□□ -0.52
SF3A3-204ENST00000462258 SOX1O00570 391 aaPredicted RBP11.82□□□□□ -0.52
SF3A3-204ENST00000462258 SH2B2O14492 632 aaPredicted RBP11.82□□□□□ -0.52
SF3A3-204ENST00000462258 PPP1R11O60927 126 aaPredicted RBP11.82□□□□□ -0.52
SF3A3-204ENST00000462258 DDAH1O94760 285 aa11.82□□□□□ -0.52
SF3A3-204ENST00000462258 NEFLP07196 543 aa11.82□□□□□ -0.52
SF3A3-204ENST00000462258 MCM5P33992 734 aa11.82□□□□□ -0.52
SF3A3-204ENST00000462258 MRPL12P52815 198 aaKnown RBP11.82□□□□□ -0.52
SF3A3-204ENST00000462258 PPP2R5BQ15173 497 aa11.82□□□□□ -0.52
SF3A3-204ENST00000462258 NECTIN1Q15223 517 aa11.82□□□□□ -0.52
SF3A3-204ENST00000462258 SLC35G1Q2M3R5 365 aa11.82□□□□□ -0.52
SF3A3-204ENST00000462258 DUSP28Q4G0W2 176 aa11.82□□□□□ -0.52
SF3A3-204ENST00000462258 TMEM63BQ5T3F8 832 aa11.82□□□□□ -0.52
SF3A3-204ENST00000462258 IQSEC1Q6DN90 963 aa11.82□□□□□ -0.52
SF3A3-204ENST00000462258 ANKRD33Q7Z3H0 272 aa11.82□□□□□ -0.52
SF3A3-204ENST00000462258 SH3RF1Q7Z6J0 888 aa11.82□□□□□ -0.52
SF3A3-204ENST00000462258 ZNF654Q8IZM8 581 aa11.82□□□□□ -0.52
SF3A3-204ENST00000462258 SYTL5Q8TDW5 730 aaPredicted RBP11.82□□□□□ -0.52
SF3A3-204ENST00000462258 IGDCC4Q8TDY8 1250 aa11.82□□□□□ -0.52
SF3A3-204ENST00000462258 TRIM43Q96BQ3 446 aaPredicted RBP11.82□□□□□ -0.52
SF3A3-204ENST00000462258 MTA3Q9BTC8 594 aa11.82□□□□□ -0.52
SF3A3-204ENST00000462258 WDR11Q9BZH6 1224 aa11.82□□□□□ -0.52
SF3A3-204ENST00000462258 COL20A1Q9P218 1284 aa11.82□□□□□ -0.52
SF3A3-204ENST00000462258 Q9Y3F1 56 aa11.82□□□□□ -0.52
SF3A3-204ENST00000462258 SCN10AQ9Y5Y9 1956 aa11.81□□□□□ -0.52
SF3A3-204ENST00000462258 RBM47A0AV96 593 aaKnown RBP11.81□□□□□ -0.52
SF3A3-204ENST00000462258 DCDC2CA8MYV0 355 aa11.81□□□□□ -0.52
SF3A3-204ENST00000462258 OPLAHO14841 1288 aa11.81□□□□□ -0.52
SF3A3-204ENST00000462258 DYNC1LI2O43237 492 aaPredicted RBP11.81□□□□□ -0.52
SF3A3-204ENST00000462258 CYTH3O43739 400 aa11.81□□□□□ -0.52
SF3A3-204ENST00000462258 ZEB2O60315 1214 aa11.81□□□□□ -0.52
SF3A3-204ENST00000462258 CFBP00751 764 aa11.81□□□□□ -0.52
SF3A3-204ENST00000462258 COL9A3Q14050 684 aaPredicted RBP11.81□□□□□ -0.52
SF3A3-204ENST00000462258 RNF20Q5VTR2 975 aa11.81□□□□□ -0.52
SF3A3-204ENST00000462258 CXCL17Q6UXB2 119 aa11.81□□□□□ -0.52
SF3A3-204ENST00000462258 CTCFLQ8NI51 663 aaPredicted RBP11.81□□□□□ -0.52
SF3A3-204ENST00000462258 SCFD2Q8WU76 684 aa11.81□□□□□ -0.52
SF3A3-204ENST00000462258 TBC1D5Q92609 795 aa11.81□□□□□ -0.52
SF3A3-204ENST00000462258 BADQ92934 168 aa11.81□□□□□ -0.52
SF3A3-204ENST00000462258 VTI1AQ96AJ9 217 aa11.81□□□□□ -0.52
SF3A3-204ENST00000462258 LRCH3Q96II8 777 aa11.81□□□□□ -0.52
SF3A3-204ENST00000462258 TMEM87BQ96K49 555 aa11.81□□□□□ -0.52
SF3A3-204ENST00000462258 TOX2Q96NM4 488 aa11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms