RNA–Protein interactions for RNA: ENST00000439717.2

HSPG2-206, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 2

Gene HSPG2, Length 637 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-206ENST00000439717 SLC30A10Q6XR72 485 aa13.67□□□□□ -0.22
HSPG2-206ENST00000439717 CMTR1Q8N1G2 835 aaKnown RBP13.67□□□□□ -0.22
HSPG2-206ENST00000439717 TRPV1Q8NER1 839 aa13.67□□□□□ -0.22
HSPG2-206ENST00000439717 DNERQ8NFT8 737 aa13.67□□□□□ -0.22
HSPG2-206ENST00000439717 ZNF274Q96GC6 653 aaPredicted RBP13.67□□□□□ -0.22
HSPG2-206ENST00000439717 MPHOSPH6Q99547 160 aaKnown RBP13.67□□□□□ -0.22
HSPG2-206ENST00000439717 FAM217BQ9NTX9 383 aaPredicted RBP13.67□□□□□ -0.22
HSPG2-206ENST00000439717 DDX20Q9UHI6 824 aaKnown RBP13.67□□□□□ -0.22
HSPG2-206ENST00000439717 B4DLN1 442 aa13.66□□□□□ -0.22
HSPG2-206ENST00000439717 SNAI1O95863 264 aaPredicted RBP13.66□□□□□ -0.22
HSPG2-206ENST00000439717 TFRCP02786 760 aaKnown RBP13.66□□□□□ -0.22
HSPG2-206ENST00000439717 CNGA1P29973 690 aa13.66□□□□□ -0.22
HSPG2-206ENST00000439717 PDIA3P30101 505 aaKnown RBP13.66□□□□□ -0.22
HSPG2-206ENST00000439717 CDC27P30260 824 aa13.66□□□□□ -0.22
HSPG2-206ENST00000439717 MRPL12P52815 198 aaKnown RBP13.66□□□□□ -0.22
HSPG2-206ENST00000439717 FUT2Q10981 343 aa13.66□□□□□ -0.22
HSPG2-206ENST00000439717 ANKRD1Q15327 319 aa13.66□□□□□ -0.22
HSPG2-206ENST00000439717 PRAMEF19Q5SWL8 479 aa13.66□□□□□ -0.22
HSPG2-206ENST00000439717 LHX8Q68G74 356 aa13.66□□□□□ -0.22
HSPG2-206ENST00000439717 ARMCX2Q7L311 632 aa13.66□□□□□ -0.22
HSPG2-206ENST00000439717 CCDC82Q8N4S0 544 aa13.66□□□□□ -0.22
HSPG2-206ENST00000439717 MORC4Q8TE76 937 aa13.66□□□□□ -0.22
HSPG2-206ENST00000439717 PIBF1Q8WXW3 757 aa13.66□□□□□ -0.22
HSPG2-206ENST00000439717 SHISA4Q96DD7 197 aa13.66□□□□□ -0.22
HSPG2-206ENST00000439717 ABHD16BQ9H3Z7 469 aa13.66□□□□□ -0.22
HSPG2-206ENST00000439717 CDKN2AIPQ9NXV6 580 aaPredicted RBP13.66□□□□□ -0.22
HSPG2-206ENST00000439717 SMCHD1A6NHR9 2005 aa13.66□□□□□ -0.22
HSPG2-206ENST00000439717 ASTN1O14525 1302 aa13.65□□□□□ -0.22
HSPG2-206ENST00000439717 CNTNAP5Q8WYK1 1306 aa13.65□□□□□ -0.22
HSPG2-206ENST00000439717 MYH6P13533 1939 aa13.65□□□□□ -0.22
HSPG2-206ENST00000439717 OPLAHO14841 1288 aa13.65□□□□□ -0.22
HSPG2-206ENST00000439717 CFBP00751 764 aa13.65□□□□□ -0.22
HSPG2-206ENST00000439717 ZNF865P0CJ78 1059 aaPredicted RBP13.65□□□□□ -0.22
HSPG2-206ENST00000439717 ADD1P35611 737 aaKnown RBP13.65□□□□□ -0.22
HSPG2-206ENST00000439717 ALDH5A1P51649 535 aaPredicted RBP13.65□□□□□ -0.22
HSPG2-206ENST00000439717 HSD17B4P51659 736 aa13.65□□□□□ -0.22
HSPG2-206ENST00000439717 ACVR2BQ13705 512 aa13.65□□□□□ -0.22
HSPG2-206ENST00000439717 ANKLE1Q8NAG6 615 aa13.65□□□□□ -0.22
HSPG2-206ENST00000439717 SYTL5Q8TDW5 730 aaPredicted RBP13.65□□□□□ -0.22
HSPG2-206ENST00000439717 TBC1D5Q92609 795 aa13.65□□□□□ -0.22
HSPG2-206ENST00000439717 UPF2Q9HAU5 1272 aaKnown RBP13.65□□□□□ -0.22
HSPG2-206ENST00000439717 RBM27Q9P2N5 1060 aaKnown RBP13.65□□□□□ -0.22
HSPG2-206ENST00000439717 OGDHLQ9ULD0 1010 aa13.65□□□□□ -0.22
HSPG2-206ENST00000439717 GCOM1H8Y6P7 765 aaPredicted RBP13.64□□□□□ -0.23
HSPG2-206ENST00000439717 hCG_1984214I3L0E3 225 aa13.64□□□□□ -0.23
HSPG2-206ENST00000439717 POLR2MP0CAP2 368 aa13.64□□□□□ -0.23
HSPG2-206ENST00000439717 AKR1A1P14550 325 aa13.64□□□□□ -0.23
HSPG2-206ENST00000439717 RBM25P49756 843 aaKnown RBP13.64□□□□□ -0.23
HSPG2-206ENST00000439717 TEX2Q8IWB9 1127 aa13.64□□□□□ -0.23
HSPG2-206ENST00000439717 ZNF713Q8N859 430 aaPredicted RBP13.64□□□□□ -0.23
HSPG2-206ENST00000439717 NSUN6Q8TEA1 469 aaKnown RBP13.64□□□□□ -0.23
HSPG2-206ENST00000439717 PURBQ96QR8 312 aaKnown RBP13.64□□□□□ -0.23
HSPG2-206ENST00000439717 IWS1Q96ST2 819 aa13.64□□□□□ -0.23
HSPG2-206ENST00000439717 C22orf23Q9BZE7 217 aa13.64□□□□□ -0.23
HSPG2-206ENST00000439717 ZHX1Q9UKY1 873 aaPredicted RBP13.64□□□□□ -0.23
HSPG2-206ENST00000439717 FAM184BQ9ULE4 1060 aa13.64□□□□□ -0.23
HSPG2-206ENST00000439717 V9GY48 417 aaPredicted RBP13.64□□□□□ -0.23
HSPG2-206ENST00000439717 BRCA2P51587 3418 aa13.63□□□□□ -0.23
HSPG2-206ENST00000439717 IFNAR1P17181 557 aa13.63□□□□□ -0.23
HSPG2-206ENST00000439717 EDNRBP24530 442 aa13.63□□□□□ -0.23
HSPG2-206ENST00000439717 NEK4P51957 841 aa13.63□□□□□ -0.23
HSPG2-206ENST00000439717 TAAR1Q96RJ0 339 aa13.63□□□□□ -0.23
HSPG2-206ENST00000439717 KATNBL1Q9H079 304 aa13.63□□□□□ -0.23
HSPG2-206ENST00000439717 VTA1Q9NP79 307 aa13.63□□□□□ -0.23
HSPG2-206ENST00000439717 COL20A1Q9P218 1284 aa13.63□□□□□ -0.23
HSPG2-206ENST00000439717 LCTP09848 1927 aa13.62□□□□□ -0.23
HSPG2-206ENST00000439717 hCG_1642624A0A1W2PR95 340 aa13.62□□□□□ -0.23
HSPG2-206ENST00000439717 PIK3CDO00329 1044 aa13.62□□□□□ -0.23
HSPG2-206ENST00000439717 PRPF3O43395 683 aaKnown RBP13.62□□□□□ -0.23
HSPG2-206ENST00000439717 RARBP10826 455 aa13.62□□□□□ -0.23
HSPG2-206ENST00000439717 AK2P54819 239 aa13.62□□□□□ -0.23
HSPG2-206ENST00000439717 CCT2P78371 535 aaKnown RBP13.62□□□□□ -0.23
HSPG2-206ENST00000439717 AKAP17AQ02040 695 aaKnown RBP13.62□□□□□ -0.23
HSPG2-206ENST00000439717 PDE4DQ08499 809 aa13.62□□□□□ -0.23
HSPG2-206ENST00000439717 NTRK3Q16288 839 aa13.62□□□□□ -0.23
HSPG2-206ENST00000439717 ARHGEF16Q5VV41 709 aa13.62□□□□□ -0.23
HSPG2-206ENST00000439717 PPP1R18Q6NYC8 613 aa13.62□□□□□ -0.23
HSPG2-206ENST00000439717 CPLX2Q6PUV4 134 aaKnown RBP13.62□□□□□ -0.23
HSPG2-206ENST00000439717 HEATR3Q7Z4Q2 680 aa13.62□□□□□ -0.23
HSPG2-206ENST00000439717 UBE2Q1Q7Z7E8 422 aa13.62□□□□□ -0.23
HSPG2-206ENST00000439717 ARRDC4Q8NCT1 418 aa13.62□□□□□ -0.23
HSPG2-206ENST00000439717 IL27Q8NEV9 243 aa13.62□□□□□ -0.23
HSPG2-206ENST00000439717 CUL5Q93034 780 aa13.62□□□□□ -0.23
HSPG2-206ENST00000439717 RMDN3Q96TC7 470 aa13.62□□□□□ -0.23
HSPG2-206ENST00000439717 RNF26Q9BY78 433 aaPredicted RBP13.62□□□□□ -0.23
HSPG2-206ENST00000439717 BAZ2BQ9UIF8 2168 aaKnown RBP13.62□□□□□ -0.23
HSPG2-206ENST00000439717 PFKFB2O60825 505 aa13.61□□□□□ -0.23
HSPG2-206ENST00000439717 FARP2O94887 1054 aaPredicted RBP13.61□□□□□ -0.23
HSPG2-206ENST00000439717 HOXA13P31271 388 aaPredicted RBP13.61□□□□□ -0.23
HSPG2-206ENST00000439717 MLLT1Q03111 559 aaPredicted RBP13.61□□□□□ -0.23
HSPG2-206ENST00000439717 PFKFB3Q16875 520 aaPredicted RBP13.61□□□□□ -0.23
HSPG2-206ENST00000439717 CCDC144BQ3MJ40 725 aa13.61□□□□□ -0.23
HSPG2-206ENST00000439717 WWC2Q6AWC2 1192 aa13.61□□□□□ -0.23
HSPG2-206ENST00000439717 IQSEC1Q6DN90 963 aa13.61□□□□□ -0.23
HSPG2-206ENST00000439717 TAPT1Q6NXT6 567 aa13.61□□□□□ -0.23
HSPG2-206ENST00000439717 LARP6Q9BRS8 491 aaKnown RBP13.61□□□□□ -0.23
HSPG2-206ENST00000439717 GLT8D2Q9H1C3 349 aa13.61□□□□□ -0.23
HSPG2-206ENST00000439717 SLKQ9H2G2 1235 aaPredicted RBP13.61□□□□□ -0.23
HSPG2-206ENST00000439717 PSTPIP2Q9H939 334 aa13.61□□□□□ -0.23
HSPG2-206ENST00000439717 NCOA5Q9HCD5 579 aaKnown RBP13.61□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms