RNA–Protein interactions for RNA: ENST00000439613.2

HMGB1P37-201, Transcript of high mobility group box 1 pseudogene 37, humanhuman

BASIC

Gene HMGB1P37, Length 609 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P37-201ENST00000439613 GRM4Q14833 912 aa4.58□□□□□ -1.68
HMGB1P37-201ENST00000439613 TMTC3Q6ZXV5 915 aa4.58□□□□□ -1.68
HMGB1P37-201ENST00000439613 CDC37L1Q7L3B6 337 aa4.58□□□□□ -1.68
HMGB1P37-201ENST00000439613 TRIM46Q7Z4K8 759 aa4.58□□□□□ -1.68
HMGB1P37-201ENST00000439613 USP48Q86UV5 1035 aa4.58□□□□□ -1.68
HMGB1P37-201ENST00000439613 FERMT3Q86UX7 667 aa4.58□□□□□ -1.68
HMGB1P37-201ENST00000439613 FAM83AQ86UY5 434 aa4.58□□□□□ -1.68
HMGB1P37-201ENST00000439613 METTL16Q86W50 562 aaKnown RBP4.58□□□□□ -1.68
HMGB1P37-201ENST00000439613 TRIM50Q86XT4 487 aa4.58□□□□□ -1.68
HMGB1P37-201ENST00000439613 ZSCAN29Q8IWY8 852 aaPredicted RBP4.58□□□□□ -1.68
HMGB1P37-201ENST00000439613 CCDC144CPQ8IYA2 1237 aa4.58□□□□□ -1.68
HMGB1P37-201ENST00000439613 LINC00528Q8N1L1 170 aa4.58□□□□□ -1.68
HMGB1P37-201ENST00000439613 RETREG2Q8NC44 543 aa4.58□□□□□ -1.68
HMGB1P37-201ENST00000439613 SERBP1Q8NC51 408 aaKnown RBP eCLIP4.58□□□□□ -1.68
HMGB1P37-201ENST00000439613 FAM151AQ8WW52 585 aa4.58□□□□□ -1.68
HMGB1P37-201ENST00000439613 PRMT6Q96LA8 375 aaPredicted RBP4.58□□□□□ -1.68
HMGB1P37-201ENST00000439613 PURBQ96QR8 312 aaKnown RBP4.58□□□□□ -1.68
HMGB1P37-201ENST00000439613 ALG1Q9BT22 464 aa4.58□□□□□ -1.68
HMGB1P37-201ENST00000439613 SLC26A6Q9BXS9 759 aa4.58□□□□□ -1.68
HMGB1P37-201ENST00000439613 ARHGEF10LQ9HCE6 1279 aa4.58□□□□□ -1.68
HMGB1P37-201ENST00000439613 DDX4Q9NQI0 724 aaKnown RBP4.58□□□□□ -1.68
HMGB1P37-201ENST00000439613 IL17RBQ9NRM6 502 aa4.58□□□□□ -1.68
HMGB1P37-201ENST00000439613 HERC5Q9UII4 1024 aaKnown RBP4.58□□□□□ -1.68
HMGB1P37-201ENST00000439613 ZMIZ1Q9ULJ6 1067 aa4.58□□□□□ -1.68
HMGB1P37-201ENST00000439613 ISY1Q9ULR0 285 aaKnown RBP4.58□□□□□ -1.68
HMGB1P37-201ENST00000439613 STX8Q9UNK0 236 aa4.58□□□□□ -1.68
HMGB1P37-201ENST00000439613 BAZ2BQ9UIF8 2168 aaKnown RBP4.58□□□□□ -1.68
HMGB1P37-201ENST00000439613 MYH4Q9Y623 1939 aa4.58□□□□□ -1.68
HMGB1P37-201ENST00000439613 ADAMTSL1Q8N6G6 1762 aa4.58□□□□□ -1.68
HMGB1P37-201ENST00000439613 A0A1W2PRU2 124 aa4.57□□□□□ -1.68
HMGB1P37-201ENST00000439613 SMIM22K7EJ46 135 aa4.57□□□□□ -1.68
HMGB1P37-201ENST00000439613 FZD9O00144 591 aa4.57□□□□□ -1.68
HMGB1P37-201ENST00000439613 NFKBIEO00221 500 aa4.57□□□□□ -1.68
HMGB1P37-201ENST00000439613 MEN1O00255 615 aa4.57□□□□□ -1.68
HMGB1P37-201ENST00000439613 SPINT1O43278 529 aa4.57□□□□□ -1.68
HMGB1P37-201ENST00000439613 NMT2O60551 498 aa4.57□□□□□ -1.68
HMGB1P37-201ENST00000439613 LETM1O95202 739 aaPredicted RBP4.57□□□□□ -1.68
HMGB1P37-201ENST00000439613 TTLL1O95922 423 aa4.57□□□□□ -1.68
HMGB1P37-201ENST00000439613 PARP1P09874 1014 aaKnown RBP4.57□□□□□ -1.68
HMGB1P37-201ENST00000439613 RXRAP19793 462 aa4.57□□□□□ -1.68
HMGB1P37-201ENST00000439613 LMNB1P20700 586 aa4.57□□□□□ -1.68
HMGB1P37-201ENST00000439613 U2AF2P26368 475 aaKnown RBP eCLIP4.57□□□□□ -1.68
HMGB1P37-201ENST00000439613 CALML3P27482 149 aa4.57□□□□□ -1.68
HMGB1P37-201ENST00000439613 SHMT1P34896 483 aa4.57□□□□□ -1.68
HMGB1P37-201ENST00000439613 DNM1Q05193 864 aaKnown RBP4.57□□□□□ -1.68
HMGB1P37-201ENST00000439613 TCP10Q12799 353 aa4.57□□□□□ -1.68
HMGB1P37-201ENST00000439613 NFIAQ12857 509 aa4.57□□□□□ -1.68
HMGB1P37-201ENST00000439613 DPYDQ12882 1025 aa4.57□□□□□ -1.68
HMGB1P37-201ENST00000439613 RESTQ13127 1097 aa4.57□□□□□ -1.68
HMGB1P37-201ENST00000439613 PTK7Q13308 1070 aa4.57□□□□□ -1.68
HMGB1P37-201ENST00000439613 TNFAIP1Q13829 316 aa4.57□□□□□ -1.68
HMGB1P37-201ENST00000439613 SLC4A8Q2Y0W8 1093 aa4.57□□□□□ -1.68
HMGB1P37-201ENST00000439613 FOXD4L6Q3SYB3 417 aaPredicted RBP4.57□□□□□ -1.68
HMGB1P37-201ENST00000439613 CERKLQ49MI3 558 aaPredicted RBP4.57□□□□□ -1.68
HMGB1P37-201ENST00000439613 ASPRV1Q53RT3 343 aa4.57□□□□□ -1.68
HMGB1P37-201ENST00000439613 C6orf118Q5T5N4 469 aa4.57□□□□□ -1.68
HMGB1P37-201ENST00000439613 KRT40Q6A162 431 aa4.57□□□□□ -1.68
HMGB1P37-201ENST00000439613 GALNT17Q6IS24 598 aa4.57□□□□□ -1.68
HMGB1P37-201ENST00000439613 TATDN1Q6P1N9 297 aa4.57□□□□□ -1.68
HMGB1P37-201ENST00000439613 FOXD4L3Q6VB84 417 aaPredicted RBP4.57□□□□□ -1.68
HMGB1P37-201ENST00000439613 ARHGAP27Q6ZUM4 889 aa4.57□□□□□ -1.68
HMGB1P37-201ENST00000439613 NBPF11Q86T75 865 aa4.57□□□□□ -1.68
HMGB1P37-201ENST00000439613 RAB11FIP4Q86YS3 637 aa4.57□□□□□ -1.68
HMGB1P37-201ENST00000439613 SLC44A5Q8NCS7 719 aa4.57□□□□□ -1.68
HMGB1P37-201ENST00000439613 CCDC12Q8WUD4 166 aaPredicted RBP4.57□□□□□ -1.68
HMGB1P37-201ENST00000439613 PHKBQ93100 1093 aa4.57□□□□□ -1.68
HMGB1P37-201ENST00000439613 MKL1Q969V6 931 aa4.57□□□□□ -1.68
HMGB1P37-201ENST00000439613 HOOK2Q96ED9 719 aa4.57□□□□□ -1.68
HMGB1P37-201ENST00000439613 ZBED3Q96IU2 234 aaPredicted RBP4.57□□□□□ -1.68
HMGB1P37-201ENST00000439613 SPATA32Q96LK8 384 aa4.57□□□□□ -1.68
HMGB1P37-201ENST00000439613 ZFP42Q96MM3 310 aa4.57□□□□□ -1.68
HMGB1P37-201ENST00000439613 CSRNP1Q96S65 589 aa4.57□□□□□ -1.68
HMGB1P37-201ENST00000439613 TMEM47Q9BQJ4 181 aa4.57□□□□□ -1.68
HMGB1P37-201ENST00000439613 MYL10Q9BUA6 226 aa4.57□□□□□ -1.68
HMGB1P37-201ENST00000439613 SPZ1Q9BXG8 430 aa4.57□□□□□ -1.68
HMGB1P37-201ENST00000439613 FOXP1Q9H334 677 aaPredicted RBP4.57□□□□□ -1.68
HMGB1P37-201ENST00000439613 TDRD3Q9H7E2 651 aaKnown RBP4.57□□□□□ -1.68
HMGB1P37-201ENST00000439613 KANSL2Q9H9L4 492 aa4.57□□□□□ -1.68
HMGB1P37-201ENST00000439613 ETNK1Q9HBU6 452 aa4.57□□□□□ -1.68
HMGB1P37-201ENST00000439613 BRMS1Q9HCU9 246 aa4.57□□□□□ -1.68
HMGB1P37-201ENST00000439613 CABP5Q9NP86 173 aa4.57□□□□□ -1.68
HMGB1P37-201ENST00000439613 MYOZ2Q9NPC6 264 aa4.57□□□□□ -1.68
HMGB1P37-201ENST00000439613 SH3GLB2Q9NR46 395 aa4.57□□□□□ -1.68
HMGB1P37-201ENST00000439613 MTMR4Q9NYA4 1195 aa4.57□□□□□ -1.68
HMGB1P37-201ENST00000439613 ZNF70Q9UC06 446 aaPredicted RBP4.57□□□□□ -1.68
HMGB1P37-201ENST00000439613 SERTAD1Q9UHV2 236 aa4.57□□□□□ -1.68
HMGB1P37-201ENST00000439613 RCOR1Q9UKL0 485 aa4.57□□□□□ -1.68
HMGB1P37-201ENST00000439613 SYNPO2Q9UMS6 1093 aa4.57□□□□□ -1.68
HMGB1P37-201ENST00000439613 NOVA2Q9UNW9 492 aaKnown RBP4.57□□□□□ -1.68
HMGB1P37-201ENST00000439613 CNPY2Q9Y2B0 182 aa4.57□□□□□ -1.68
HMGB1P37-201ENST00000439613 COL4A5P29400 1685 aa4.57□□□□□ -1.68
HMGB1P37-201ENST00000439613 GREB1LQ9C091 1923 aaPredicted RBP4.56□□□□□ -1.68
HMGB1P37-201ENST00000439613 SBF1O95248 1867 aa4.56□□□□□ -1.68
HMGB1P37-201ENST00000439613 IGKV6D-41A0A0C4DH26 115 aa4.56□□□□□ -1.68
HMGB1P37-201ENST00000439613 DDTLA6NHG4 134 aaPredicted RBP4.56□□□□□ -1.68
HMGB1P37-201ENST00000439613 FAM196BA6NMK8 535 aa4.56□□□□□ -1.68
HMGB1P37-201ENST00000439613 KLRF2D3W0D1 207 aa4.56□□□□□ -1.68
HMGB1P37-201ENST00000439613 H7C1D1 291 aa4.56□□□□□ -1.68
HMGB1P37-201ENST00000439613 hCG_1984214I3L0E3 225 aa4.56□□□□□ -1.68
HMGB1P37-201ENST00000439613 MPHOSPH10O00566 681 aaKnown RBP4.56□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms