RNA–Protein interactions for RNA: ENST00000413642.7

VEGFA-207, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 1,197 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-207ENST00000413642 MDM2Q00987 491 aaPredicted RBP30.64■■■□□ 2.5
VEGFA-207ENST00000413642 BEX3Q00994 111 aa30.64■■■□□ 2.5
VEGFA-207ENST00000413642 RGS22Q8NE09 1264 aa30.64■■■□□ 2.5
VEGFA-207ENST00000413642 MTMR8Q96EF0 704 aa30.64■■■□□ 2.5
VEGFA-207ENST00000413642 MYL10Q9BUA6 226 aa30.64■■■□□ 2.5
VEGFA-207ENST00000413642 COL20A1Q9P218 1284 aa30.64■■■□□ 2.5
VEGFA-207ENST00000413642 LCTP09848 1927 aa30.64■■■□□ 2.5
VEGFA-207ENST00000413642 CST5P28325 142 aaPredicted RBP30.63■■■□□ 2.49
VEGFA-207ENST00000413642 TLE2Q04725 743 aa30.63■■■□□ 2.49
VEGFA-207ENST00000413642 GNASQ5JWF2 1037 aa30.63■■■□□ 2.49
VEGFA-207ENST00000413642 NUP133Q8WUM0 1156 aa30.63■■■□□ 2.49
VEGFA-207ENST00000413642 PIGSQ96S52 555 aa30.63■■■□□ 2.49
VEGFA-207ENST00000413642 VTA1Q9NP79 307 aa30.63■■■□□ 2.49
VEGFA-207ENST00000413642 DYNC1LI2O43237 492 aaPredicted RBP30.62■■■□□ 2.49
VEGFA-207ENST00000413642 CYTH3O43739 400 aa30.62■■■□□ 2.49
VEGFA-207ENST00000413642 IQSEC1Q6DN90 963 aa30.62■■■□□ 2.49
VEGFA-207ENST00000413642 SH3RF1Q7Z6J0 888 aa30.62■■■□□ 2.49
VEGFA-207ENST00000413642 CATIPQ7Z7H3 387 aa30.62■■■□□ 2.49
VEGFA-207ENST00000413642 HOMER1Q86YM7 354 aa30.62■■■□□ 2.49
VEGFA-207ENST00000413642 SYTL5Q8TDW5 730 aaPredicted RBP30.62■■■□□ 2.49
VEGFA-207ENST00000413642 TAAR1Q96RJ0 339 aa30.62■■■□□ 2.49
VEGFA-207ENST00000413642 SPC25Q9HBM1 224 aa30.62■■■□□ 2.49
VEGFA-207ENST00000413642 SH2B2O14492 632 aaPredicted RBP30.61■■■□□ 2.49
VEGFA-207ENST00000413642 ASGR1P07306 291 aa30.61■■■□□ 2.49
VEGFA-207ENST00000413642 MCM5P33992 734 aa30.61■■■□□ 2.49
VEGFA-207ENST00000413642 C1orf53Q5VUE5 145 aa30.61■■■□□ 2.49
VEGFA-207ENST00000413642 CASC1Q6TDU7 716 aa30.61■■■□□ 2.49
VEGFA-207ENST00000413642 TLK2Q86UE8 772 aa30.61■■■□□ 2.49
VEGFA-207ENST00000413642 AMNQ9BXJ7 453 aa30.61■■■□□ 2.49
VEGFA-207ENST00000413642 LRRC2Q9BYS8 371 aa30.61■■■□□ 2.49
VEGFA-207ENST00000413642 RIOX1Q9H6W3 641 aa30.61■■■□□ 2.49
VEGFA-207ENST00000413642 PRDM5Q9NQX1 630 aaPredicted RBP30.61■■■□□ 2.49
VEGFA-207ENST00000413642 STARD7Q9NQZ5 370 aa30.61■■■□□ 2.49
VEGFA-207ENST00000413642 MRPL11Q9Y3B7 192 aaKnown RBP30.61■■■□□ 2.49
VEGFA-207ENST00000413642 MOXD2PA6NHM9 499 aa30.6■■■□□ 2.49
VEGFA-207ENST00000413642 OPLAHO14841 1288 aa30.6■■■□□ 2.49
VEGFA-207ENST00000413642 ZBTB5O15062 677 aa30.6■■■□□ 2.49
VEGFA-207ENST00000413642 BMP8BP34820 402 aa30.6■■■□□ 2.49
VEGFA-207ENST00000413642 PDE4DQ08499 809 aa30.6■■■□□ 2.49
VEGFA-207ENST00000413642 ZNF654Q8IZM8 581 aa30.6■■■□□ 2.49
VEGFA-207ENST00000413642 LRRC37A2A6NM11 1700 aa30.59■■■□□ 2.49
VEGFA-207ENST00000413642 EDNRBP24530 442 aa30.59■■■□□ 2.49
VEGFA-207ENST00000413642 NKX3-2P78367 333 aa30.59■■■□□ 2.49
VEGFA-207ENST00000413642 RASEFQ8IZ41 740 aa30.59■■■□□ 2.49
VEGFA-207ENST00000413642 PCSK9Q8NBP7 692 aaKnown RBP30.59■■■□□ 2.49
VEGFA-207ENST00000413642 DNERQ8NFT8 737 aa30.59■■■□□ 2.49
VEGFA-207ENST00000413642 PIBF1Q8WXW3 757 aa30.59■■■□□ 2.49
VEGFA-207ENST00000413642 PDLIM7Q9NR12 457 aa30.59■■■□□ 2.49
VEGFA-207ENST00000413642 LOC102724159A0A0B4J2E5 919 aa30.58■■■□□ 2.49
VEGFA-207ENST00000413642 TRIM43BA6NCK2 446 aa30.58■■■□□ 2.49
VEGFA-207ENST00000413642 PQBP1O60828 265 aaKnown RBP30.58■■■□□ 2.49
VEGFA-207ENST00000413642 PWP2Q15269 919 aaKnown RBP30.58■■■□□ 2.49
VEGFA-207ENST00000413642 MCF2L2Q86YR7 1114 aa30.58■■■□□ 2.49
VEGFA-207ENST00000413642 RAB11FIP4Q86YS3 637 aa30.58■■■□□ 2.49
VEGFA-207ENST00000413642 TRIM43Q96BQ3 446 aaPredicted RBP30.58■■■□□ 2.49
VEGFA-207ENST00000413642 UBE2OQ9C0C9 1292 aaKnown RBP30.58■■■□□ 2.49
VEGFA-207ENST00000413642 AP5M1Q9H0R1 490 aa30.58■■■□□ 2.49
VEGFA-207ENST00000413642 PCDHA1Q9Y5I3 950 aa30.58■■■□□ 2.49
VEGFA-207ENST00000413642 RXRAP19793 462 aa30.57■■■□□ 2.48
VEGFA-207ENST00000413642 NFXL1Q6ZNB6 911 aa30.57■■■□□ 2.48
VEGFA-207ENST00000413642 VTI1AQ96AJ9 217 aa30.57■■■□□ 2.48
VEGFA-207ENST00000413642 TMEM87BQ96K49 555 aa30.57■■■□□ 2.48
VEGFA-207ENST00000413642 WDR11Q9BZH6 1224 aa30.57■■■□□ 2.48
VEGFA-207ENST00000413642 PRKAG2Q9UGJ0 569 aa30.57■■■□□ 2.48
VEGFA-207ENST00000413642 TRIOBPQ9H2D6 2365 aa30.57■■■□□ 2.48
VEGFA-207ENST00000413642 RBM47A0AV96 593 aaKnown RBP30.56■■■□□ 2.48
VEGFA-207ENST00000413642 CFBP00751 764 aa30.56■■■□□ 2.48
VEGFA-207ENST00000413642 FSCN1Q16658 493 aaKnown RBP30.56■■■□□ 2.48
VEGFA-207ENST00000413642 GLT1D1Q96MS3 346 aa30.56■■■□□ 2.48
VEGFA-207ENST00000413642 MTA3Q9BTC8 594 aa30.56■■■□□ 2.48
VEGFA-207ENST00000413642 DDAH1O94760 285 aa30.55■■■□□ 2.48
VEGFA-207ENST00000413642 ADCK5Q3MIX3 580 aa30.55■■■□□ 2.48
VEGFA-207ENST00000413642 DUSP28Q4G0W2 176 aa30.55■■■□□ 2.48
VEGFA-207ENST00000413642 RNF20Q5VTR2 975 aa30.55■■■□□ 2.48
VEGFA-207ENST00000413642 CXCL17Q6UXB2 119 aa30.55■■■□□ 2.48
VEGFA-207ENST00000413642 TCEANC2Q96MN5 208 aa30.55■■■□□ 2.48
VEGFA-207ENST00000413642 A0A1W2PPC1 479 aa30.54■■■□□ 2.48
VEGFA-207ENST00000413642 CCDC69A6NI79 296 aa30.54■■■□□ 2.48
VEGFA-207ENST00000413642 SOX1O00570 391 aaPredicted RBP30.54■■■□□ 2.48
VEGFA-207ENST00000413642 COPS5Q92905 334 aa30.54■■■□□ 2.48
VEGFA-207ENST00000413642 NEK1Q96PY6 1258 aa30.54■■■□□ 2.48
VEGFA-207ENST00000413642 RMDN3Q96TC7 470 aa30.54■■■□□ 2.48
VEGFA-207ENST00000413642 LBHD1Q9BQE6 289 aaPredicted RBP30.54■■■□□ 2.48
VEGFA-207ENST00000413642 Q9Y3F1 56 aa30.54■■■□□ 2.48
VEGFA-207ENST00000413642 ELP1O95163 1332 aa30.53■■■□□ 2.48
VEGFA-207ENST00000413642 PLEKHA8P1O95397 391 aa30.53■■■□□ 2.48
VEGFA-207ENST00000413642 CLTBP09497 229 aa30.53■■■□□ 2.48
VEGFA-207ENST00000413642 ITGB8P26012 769 aa30.53■■■□□ 2.48
VEGFA-207ENST00000413642 HOXA13P31271 388 aaPredicted RBP30.53■■■□□ 2.48
VEGFA-207ENST00000413642 CMTR1Q8N1G2 835 aaKnown RBP30.53■■■□□ 2.48
VEGFA-207ENST00000413642 CTCFLQ8NI51 663 aaPredicted RBP30.53■■■□□ 2.48
VEGFA-207ENST00000413642 NSUN6Q8TEA1 469 aaKnown RBP30.53■■■□□ 2.48
VEGFA-207ENST00000413642 MPHOSPH6Q99547 160 aaKnown RBP30.53■■■□□ 2.48
VEGFA-207ENST00000413642 MAF1Q9H063 256 aa30.53■■■□□ 2.48
VEGFA-207ENST00000413642 PNMA6FA0A0J9YX94 578 aa30.52■■■□□ 2.48
VEGFA-207ENST00000413642 EIF2AK2P19525 551 aaKnown RBP30.52■■■□□ 2.48
VEGFA-207ENST00000413642 LIFRP42702 1097 aa30.52■■■□□ 2.48
VEGFA-207ENST00000413642 CDK7P50613 346 aa30.52■■■□□ 2.48
VEGFA-207ENST00000413642 HSD17B4P51659 736 aa30.52■■■□□ 2.48
VEGFA-207ENST00000413642 FAAP100Q0VG06 881 aa30.52■■■□□ 2.48
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms