RNA–Protein interactions for RNA: ENST00000410828.1

RNU4-53P-201, Transcript of RNA, U4 small nuclear 53, pseudogene, humanhuman

BASIC

Gene RNU4-53P, Length 140 nt, Biotype snRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-53P-201ENST00000410828 PWP2Q15269 919 aaKnown RBP2.83□□□□□ -1.96
RNU4-53P-201ENST00000410828 PTGISQ16647 500 aa2.83□□□□□ -1.96
RNU4-53P-201ENST00000410828 NBPF20Q3BBV1 942 aa2.83□□□□□ -1.96
RNU4-53P-201ENST00000410828 DUSP28Q4G0W2 176 aa2.83□□□□□ -1.96
RNU4-53P-201ENST00000410828 TIGD5Q53EQ6 642 aa2.83□□□□□ -1.96
RNU4-53P-201ENST00000410828 HERC4Q5GLZ8 1057 aaPredicted RBP2.83□□□□□ -1.96
RNU4-53P-201ENST00000410828 TAPT1Q6NXT6 567 aa2.83□□□□□ -1.96
RNU4-53P-201ENST00000410828 CNKSR3Q6P9H4 555 aa2.83□□□□□ -1.96
RNU4-53P-201ENST00000410828 CTR9Q6PD62 1173 aa2.83□□□□□ -1.96
RNU4-53P-201ENST00000410828 NSMFQ6X4W1 530 aa2.83□□□□□ -1.96
RNU4-53P-201ENST00000410828 BMP8AQ7Z5Y6 402 aa2.83□□□□□ -1.96
RNU4-53P-201ENST00000410828 SPRED2Q7Z698 418 aa2.83□□□□□ -1.96
RNU4-53P-201ENST00000410828 TMCO2Q7Z6W1 182 aaPredicted RBP2.83□□□□□ -1.96
RNU4-53P-201ENST00000410828 ERC1Q8IUD2 1116 aa2.83□□□□□ -1.96
RNU4-53P-201ENST00000410828 ADHFE1Q8IWW8 467 aa2.83□□□□□ -1.96
RNU4-53P-201ENST00000410828 SUGP1Q8IWZ8 645 aaKnown RBP2.83□□□□□ -1.96
RNU4-53P-201ENST00000410828 FBXO16Q8IX29 292 aaPredicted RBP2.83□□□□□ -1.96
RNU4-53P-201ENST00000410828 RPAP2Q8IXW5 612 aaPredicted RBP2.83□□□□□ -1.96
RNU4-53P-201ENST00000410828 LCORLQ8N3X6 602 aa2.83□□□□□ -1.96
RNU4-53P-201ENST00000410828 CCDC155Q8N6L0 562 aa2.83□□□□□ -1.96
RNU4-53P-201ENST00000410828 BANK1Q8NDB2 785 aa2.83□□□□□ -1.96
RNU4-53P-201ENST00000410828 FBXO22Q8NEZ5 403 aa2.83□□□□□ -1.96
RNU4-53P-201ENST00000410828 SSH3Q8TE77 659 aa2.83□□□□□ -1.96
RNU4-53P-201ENST00000410828 AFAP1L1Q8TED9 768 aa2.83□□□□□ -1.96
RNU4-53P-201ENST00000410828 CHURC1Q8WUH1 139 aa2.83□□□□□ -1.96
RNU4-53P-201ENST00000410828 EDAQ92838 391 aa2.83□□□□□ -1.96
RNU4-53P-201ENST00000410828 CLUAP1Q96AJ1 413 aa2.83□□□□□ -1.96
RNU4-53P-201ENST00000410828 PBXIP1Q96AQ6 731 aa2.83□□□□□ -1.96
RNU4-53P-201ENST00000410828 MRPL38Q96DV4 380 aaKnown RBP2.83□□□□□ -1.96
RNU4-53P-201ENST00000410828 SAMD11Q96NU1 681 aa2.83□□□□□ -1.96
RNU4-53P-201ENST00000410828 TRERF1Q96PN7 1200 aa2.83□□□□□ -1.96
RNU4-53P-201ENST00000410828 PHOX2BQ99453 314 aa2.83□□□□□ -1.96
RNU4-53P-201ENST00000410828 DNAJC2Q99543 621 aaKnown RBP2.83□□□□□ -1.96
RNU4-53P-201ENST00000410828 GNL3Q9BVP2 549 aaKnown RBP eCLIP2.83□□□□□ -1.96
RNU4-53P-201ENST00000410828 WDR11Q9BZH6 1224 aa2.83□□□□□ -1.96
RNU4-53P-201ENST00000410828 DDX24Q9GZR7 859 aaKnown RBP eCLIP2.83□□□□□ -1.96
RNU4-53P-201ENST00000410828 MKNK2Q9HBH9 465 aa2.83□□□□□ -1.96
RNU4-53P-201ENST00000410828 ZNF287Q9HBT7 754 aa2.83□□□□□ -1.96
RNU4-53P-201ENST00000410828 RNF146Q9NTX7 359 aa2.83□□□□□ -1.96
RNU4-53P-201ENST00000410828 CYP39A1Q9NYL5 469 aa2.83□□□□□ -1.96
RNU4-53P-201ENST00000410828 CLIP2Q9UDT6 1046 aa2.83□□□□□ -1.96
RNU4-53P-201ENST00000410828 ADD3Q9UEY8 706 aaKnown RBP2.83□□□□□ -1.96
RNU4-53P-201ENST00000410828 MUTYHQ9UIF7 546 aa2.83□□□□□ -1.96
RNU4-53P-201ENST00000410828 ISY1Q9ULR0 285 aaKnown RBP2.83□□□□□ -1.96
RNU4-53P-201ENST00000410828 SYNPO2Q9UMS6 1093 aa2.83□□□□□ -1.96
RNU4-53P-201ENST00000410828 INSL6Q9Y581 213 aa2.83□□□□□ -1.96
RNU4-53P-201ENST00000410828 FRMPD3Q5JV73 1810 aa2.83□□□□□ -1.96
RNU4-53P-201ENST00000410828 CEP250Q9BV73 2442 aa2.82□□□□□ -1.96
RNU4-53P-201ENST00000410828 SIPA1L1O43166 1804 aa2.82□□□□□ -1.96
RNU4-53P-201ENST00000410828 ATAD5Q96QE3 1844 aa2.82□□□□□ -1.96
RNU4-53P-201ENST00000410828 ZNF316A6NFI3 1004 aaPredicted RBP2.82□□□□□ -1.96
RNU4-53P-201ENST00000410828 TMEM221A6NGB7 291 aa2.82□□□□□ -1.96
RNU4-53P-201ENST00000410828 A6NJR5 290 aa2.82□□□□□ -1.96
RNU4-53P-201ENST00000410828 B4DLN1 442 aa2.82□□□□□ -1.96
RNU4-53P-201ENST00000410828 TMEM232C9JQI7 657 aa2.82□□□□□ -1.96
RNU4-53P-201ENST00000410828 H3BNC9 293 aa2.82□□□□□ -1.96
RNU4-53P-201ENST00000410828 M0R296 226 aa2.82□□□□□ -1.96
RNU4-53P-201ENST00000410828 TTLL1O95922 423 aa2.82□□□□□ -1.96
RNU4-53P-201ENST00000410828 CXCL10P02778 98 aa2.82□□□□□ -1.96
RNU4-53P-201ENST00000410828 AMHP03971 560 aa2.82□□□□□ -1.96
RNU4-53P-201ENST00000410828 BMP3P12645 472 aa2.82□□□□□ -1.96
RNU4-53P-201ENST00000410828 ALAS1P13196 640 aa2.82□□□□□ -1.96
RNU4-53P-201ENST00000410828 TRIM27P14373 513 aa2.82□□□□□ -1.96
RNU4-53P-201ENST00000410828 SELPP16109 830 aa2.82□□□□□ -1.96
RNU4-53P-201ENST00000410828 RASA1P20936 1047 aa2.82□□□□□ -1.96
RNU4-53P-201ENST00000410828 ADD2P35612 726 aa2.82□□□□□ -1.96
RNU4-53P-201ENST00000410828 SLC1A4P43007 532 aa2.82□□□□□ -1.96
RNU4-53P-201ENST00000410828 STAT2P52630 851 aa2.82□□□□□ -1.96
RNU4-53P-201ENST00000410828 MRPL12P52815 198 aaKnown RBP2.82□□□□□ -1.96
RNU4-53P-201ENST00000410828 CHMP4BP1P59074 171 aa2.82□□□□□ -1.96
RNU4-53P-201ENST00000410828 DEFB103AP81534 67 aa2.82□□□□□ -1.96
RNU4-53P-201ENST00000410828 RBL2Q08999 1139 aa2.82□□□□□ -1.96
RNU4-53P-201ENST00000410828 IKQ13123 557 aaPredicted RBP2.82□□□□□ -1.96
RNU4-53P-201ENST00000410828 GPM6BQ13491 265 aa2.82□□□□□ -1.96
RNU4-53P-201ENST00000410828 GPNMBQ14956 572 aa2.82□□□□□ -1.96
RNU4-53P-201ENST00000410828 COL19A1Q14993 1142 aa2.82□□□□□ -1.96
RNU4-53P-201ENST00000410828 PPP2R5BQ15173 497 aa2.82□□□□□ -1.96
RNU4-53P-201ENST00000410828 UBE3CQ15386 1083 aa2.82□□□□□ -1.96
RNU4-53P-201ENST00000410828 SBK1Q52WX2 424 aa2.82□□□□□ -1.96
RNU4-53P-201ENST00000410828 HSP90AB4PQ58FF6 505 aa2.82□□□□□ -1.96
RNU4-53P-201ENST00000410828 TCEAL5Q5H9L2 206 aa2.82□□□□□ -1.96
RNU4-53P-201ENST00000410828 TMEM63BQ5T3F8 832 aa2.82□□□□□ -1.96
RNU4-53P-201ENST00000410828 IER5LQ5T953 404 aa2.82□□□□□ -1.96
RNU4-53P-201ENST00000410828 SLFN13Q68D06 897 aa2.82□□□□□ -1.96
RNU4-53P-201ENST00000410828 FAM117BQ6P1L5 589 aa2.82□□□□□ -1.96
RNU4-53P-201ENST00000410828 TRIM67Q6ZTA4 783 aa2.82□□□□□ -1.96
RNU4-53P-201ENST00000410828 LRRC8DQ7L1W4 858 aa2.82□□□□□ -1.96
RNU4-53P-201ENST00000410828 ERMP1Q7Z2K6 904 aa2.82□□□□□ -1.96
RNU4-53P-201ENST00000410828 FAM160B2Q86V87 743 aa2.82□□□□□ -1.96
RNU4-53P-201ENST00000410828 SESTD1Q86VW0 696 aa2.82□□□□□ -1.96
RNU4-53P-201ENST00000410828 RNF135Q8IUD6 432 aa2.82□□□□□ -1.96
RNU4-53P-201ENST00000410828 TRMT2AQ8IZ69 625 aaKnown RBP2.82□□□□□ -1.96
RNU4-53P-201ENST00000410828 MYOCDQ8IZQ8 938 aa2.82□□□□□ -1.96
RNU4-53P-201ENST00000410828 ZNF444Q8N0Y2 327 aaPredicted RBP2.82□□□□□ -1.96
RNU4-53P-201ENST00000410828 LRRC47Q8N1G4 583 aaKnown RBP2.82□□□□□ -1.96
RNU4-53P-201ENST00000410828 CLASRPQ8N2M8 674 aaKnown RBP2.82□□□□□ -1.96
RNU4-53P-201ENST00000410828 GMCL1P1Q8NEA9 526 aa2.82□□□□□ -1.96
RNU4-53P-201ENST00000410828 PRSS33Q8NF86 280 aa2.82□□□□□ -1.96
RNU4-53P-201ENST00000410828 OR6J1Q8NGC5 347 aa2.82□□□□□ -1.96
RNU4-53P-201ENST00000410828 MORC4Q8TE76 937 aa2.82□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 57.1 ms