RNA–Protein interactions for RNA: ENST00000407019.6

NUP50-203, Transcript of nucleoporin 50, humanhuman

TSL 1 (best) BASIC

Gene NUP50, Length 2,059 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-203ENST00000407019 OR8K1Q8NGG5 319 aa18.85■□□□□ 0.61
NUP50-203ENST00000407019 GOLGA1Q92805 767 aa18.85■□□□□ 0.61
NUP50-203ENST00000407019 LUC7L2Q9Y383 392 aaKnown RBP18.85■□□□□ 0.61
NUP50-203ENST00000407019 ANKRD31Q8N7Z5 1873 aa18.85■□□□□ 0.61
NUP50-203ENST00000407019 PNMA6FA0A0J9YX94 578 aa18.85■□□□□ 0.61
NUP50-203ENST00000407019 TDP2O95551 362 aa18.85■□□□□ 0.61
NUP50-203ENST00000407019 SRGNP10124 158 aa18.85■□□□□ 0.61
NUP50-203ENST00000407019 GRB10Q13322 594 aa18.85■□□□□ 0.61
NUP50-203ENST00000407019 SV2BQ7L1I2 683 aa18.85■□□□□ 0.61
NUP50-203ENST00000407019 TUBGCP2Q9BSJ2 902 aa18.85■□□□□ 0.61
NUP50-203ENST00000407019 RAB34Q9BZG1 259 aa18.85■□□□□ 0.61
NUP50-203ENST00000407019 JMJD4Q9H9V9 463 aa18.85■□□□□ 0.61
NUP50-203ENST00000407019 CAPN11Q9UMQ6 739 aa18.85■□□□□ 0.61
NUP50-203ENST00000407019 MYH8P13535 1937 aa18.84■□□□□ 0.61
NUP50-203ENST00000407019 B4DLN1 442 aa18.84■□□□□ 0.61
NUP50-203ENST00000407019 SLC37A4O43826 429 aa18.84■□□□□ 0.61
NUP50-203ENST00000407019 HLA-DOAP06340 250 aa18.84■□□□□ 0.61
NUP50-203ENST00000407019 FCER1AP12319 257 aa18.84■□□□□ 0.61
NUP50-203ENST00000407019 NPR1P16066 1061 aa18.84■□□□□ 0.61
NUP50-203ENST00000407019 SHMT1P34896 483 aa18.84■□□□□ 0.61
NUP50-203ENST00000407019 SCNN1DP51172 638 aa18.84■□□□□ 0.61
NUP50-203ENST00000407019 TUBB2AQ13885 445 aa18.84■□□□□ 0.61
NUP50-203ENST00000407019 UTP14CQ5TAP6 766 aaKnown RBP18.84■□□□□ 0.61
NUP50-203ENST00000407019 ANKRD40Q6AI12 368 aa18.84■□□□□ 0.61
NUP50-203ENST00000407019 ADGRF4Q8IZF3 695 aa18.84■□□□□ 0.61
NUP50-203ENST00000407019 CDK5RAP3Q96JB5 506 aa18.84■□□□□ 0.61
NUP50-203ENST00000407019 DNAJC7Q99615 494 aa18.84■□□□□ 0.61
NUP50-203ENST00000407019 TUBB2BQ9BVA1 445 aa18.84■□□□□ 0.61
NUP50-203ENST00000407019 MXD3Q9BW11 206 aa18.84■□□□□ 0.61
NUP50-203ENST00000407019 RIC8AQ9NPQ8 531 aa18.84■□□□□ 0.61
NUP50-203ENST00000407019 MYO1AQ9UBC5 1043 aa18.84■□□□□ 0.61
NUP50-203ENST00000407019 CTAGE9A4FU28 777 aa18.83■□□□□ 0.61
NUP50-203ENST00000407019 DOK7Q18PE1 504 aa18.83■□□□□ 0.61
NUP50-203ENST00000407019 CDC42EP5Q6NZY7 148 aa18.83■□□□□ 0.61
NUP50-203ENST00000407019 HHIPL2Q6UWX4 724 aa18.83■□□□□ 0.61
NUP50-203ENST00000407019 SLC35F6Q8N357 371 aa18.83■□□□□ 0.61
NUP50-203ENST00000407019 RABGGTAQ92696 567 aa18.83■□□□□ 0.61
NUP50-203ENST00000407019 CNOT6LQ96LI5 555 aaKnown RBP18.83■□□□□ 0.61
NUP50-203ENST00000407019 SLF1Q9BQI6 1058 aa18.83■□□□□ 0.61
NUP50-203ENST00000407019 BLOC1S4Q9NUP1 217 aa18.83■□□□□ 0.61
NUP50-203ENST00000407019 HMGB2P26583 209 aaKnown RBP18.83■□□□□ 0.6
NUP50-203ENST00000407019 ARHGAP25P42331 645 aa18.83■□□□□ 0.6
NUP50-203ENST00000407019 TNNI2P48788 182 aa18.83■□□□□ 0.6
NUP50-203ENST00000407019 GABPB1Q06547 395 aaPredicted RBP18.83■□□□□ 0.6
NUP50-203ENST00000407019 TSR1Q2NL82 804 aaKnown RBP18.83■□□□□ 0.6
NUP50-203ENST00000407019 KIF4BQ2VIQ3 1234 aa18.83■□□□□ 0.6
NUP50-203ENST00000407019 GPATCH4Q5T3I0 446 aaKnown RBP18.83■□□□□ 0.6
NUP50-203ENST00000407019 TEKT1Q969V4 418 aa18.83■□□□□ 0.6
NUP50-203ENST00000407019 PNMA5Q96PV4 448 aa18.83■□□□□ 0.6
NUP50-203ENST00000407019 CHP1Q99653 195 aa18.83■□□□□ 0.6
NUP50-203ENST00000407019 CDC23Q9UJX2 597 aa18.83■□□□□ 0.6
NUP50-203ENST00000407019 FHOD1Q9Y613 1164 aa18.83■□□□□ 0.6
NUP50-203ENST00000407019 EDIL3O43854 480 aa18.82■□□□□ 0.6
NUP50-203ENST00000407019 ZRANB2O95218 330 aaKnown RBP eCLIP18.82■□□□□ 0.6
NUP50-203ENST00000407019 NDUFA10O95299 355 aa18.82■□□□□ 0.6
NUP50-203ENST00000407019 PDIA5Q14554 519 aa18.82■□□□□ 0.6
NUP50-203ENST00000407019 CCDC96Q2M329 555 aa18.82■□□□□ 0.6
NUP50-203ENST00000407019 SRGAP1Q7Z6B7 1085 aa18.82■□□□□ 0.6
NUP50-203ENST00000407019 KIAA0895Q8NCT3 520 aa18.82■□□□□ 0.6
NUP50-203ENST00000407019 LARP4BQ92615 738 aaKnown RBP18.82■□□□□ 0.6
NUP50-203ENST00000407019 NUP58Q9BVL2 599 aa18.82■□□□□ 0.6
NUP50-203ENST00000407019 EPN1Q9Y6I3 576 aaPredicted RBP18.82■□□□□ 0.6
NUP50-203ENST00000407019 PVALEFA0A1B0GWK0 134 aa18.81■□□□□ 0.6
NUP50-203ENST00000407019 G3V3G9 751 aa18.81■□□□□ 0.6
NUP50-203ENST00000407019 MPHOSPH10O00566 681 aaKnown RBP18.81■□□□□ 0.6
NUP50-203ENST00000407019 PPP1R11O60927 126 aaPredicted RBP18.81■□□□□ 0.6
NUP50-203ENST00000407019 MTIF2P46199 727 aaKnown RBP18.81■□□□□ 0.6
NUP50-203ENST00000407019 MCM6Q14566 821 aa18.81■□□□□ 0.6
NUP50-203ENST00000407019 UBE2SQ16763 222 aa18.81■□□□□ 0.6
NUP50-203ENST00000407019 DCAF8Q5TAQ9 597 aa18.81■□□□□ 0.6
NUP50-203ENST00000407019 UNC13DQ70J99 1090 aa18.81■□□□□ 0.6
NUP50-203ENST00000407019 KRT27Q7Z3Y8 459 aa18.81■□□□□ 0.6
NUP50-203ENST00000407019 CEP112Q8N8E3 955 aa18.81■□□□□ 0.6
NUP50-203ENST00000407019 CUL5Q93034 780 aa18.81■□□□□ 0.6
NUP50-203ENST00000407019 QTRT2Q9H974 415 aaKnown RBP18.81■□□□□ 0.6
NUP50-203ENST00000407019 PNMA6AP0CW24 399 aaPredicted RBP18.81■□□□□ 0.6
NUP50-203ENST00000407019 ALDH1B1P30837 517 aa18.81■□□□□ 0.6
NUP50-203ENST00000407019 CLK2P49760 499 aaKnown RBP18.81■□□□□ 0.6
NUP50-203ENST00000407019 CHMP4BP1P59074 171 aa18.81■□□□□ 0.6
NUP50-203ENST00000407019 KRT79Q5XKE5 535 aa18.81■□□□□ 0.6
NUP50-203ENST00000407019 PPP4R3AQ6IN85 833 aa18.81■□□□□ 0.6
NUP50-203ENST00000407019 TTBK2Q6IQ55 1244 aa18.81■□□□□ 0.6
NUP50-203ENST00000407019 RETREG2Q8NC44 543 aa18.81■□□□□ 0.6
NUP50-203ENST00000407019 SNX29Q8TEQ0 813 aa18.81■□□□□ 0.6
NUP50-203ENST00000407019 NAPGQ99747 312 aaPredicted RBP18.81■□□□□ 0.6
NUP50-203ENST00000407019 EPC1Q9H2F5 836 aa18.81■□□□□ 0.6
NUP50-203ENST00000407019 ADAMTSL1Q8N6G6 1762 aa18.81■□□□□ 0.6
NUP50-203ENST00000407019 POTEMA6NI47 508 aa18.8■□□□□ 0.6
NUP50-203ENST00000407019 MYMKA6NI61 221 aa18.8■□□□□ 0.6
NUP50-203ENST00000407019 ABL1P00519 1130 aa18.8■□□□□ 0.6
NUP50-203ENST00000407019 ATP2B2Q01814 1243 aa18.8■□□□□ 0.6
NUP50-203ENST00000407019 TBC1D8BQ0IIM8 1120 aa18.8■□□□□ 0.6
NUP50-203ENST00000407019 APOBEC3HQ6NTF7 200 aaKnown RBP18.8■□□□□ 0.6
NUP50-203ENST00000407019 PROM2Q8N271 834 aa18.8■□□□□ 0.6
NUP50-203ENST00000407019 NLGN1Q8N2Q7 840 aa18.8■□□□□ 0.6
NUP50-203ENST00000407019 RAD54LQ92698 747 aa18.8■□□□□ 0.6
NUP50-203ENST00000407019 NOC4LQ9BVI4 516 aaKnown RBP18.8■□□□□ 0.6
NUP50-203ENST00000407019 TTYH3Q9C0H2 523 aa18.8■□□□□ 0.6
NUP50-203ENST00000407019 TMX4Q9H1E5 349 aaPredicted RBP18.8■□□□□ 0.6
NUP50-203ENST00000407019 EHD4Q9H223 541 aa18.8■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms