RNA–Protein interactions for RNA: ENST00000396172.5

DDX39B-202, Transcript of DExD-box helicase 39B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX39B, Length 2,133 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39B-202ENST00000396172 NOL7Q9UMY1 257 aaKnown RBP11.3□□□□□ -0.6
DDX39B-202ENST00000396172 SPDYE3A6NKU9 549 aa11.3□□□□□ -0.6
DDX39B-202ENST00000396172 CNMDO75829 334 aa11.3□□□□□ -0.6
DDX39B-202ENST00000396172 NCAPG2Q86XI2 1143 aa11.3□□□□□ -0.6
DDX39B-202ENST00000396172 ANKRD13CQ8N6S4 541 aa11.3□□□□□ -0.6
DDX39B-202ENST00000396172 CFHR5Q9BXR6 569 aa11.3□□□□□ -0.6
DDX39B-202ENST00000396172 MOV10L1Q9BXT6 1211 aaKnown RBP11.3□□□□□ -0.6
DDX39B-202ENST00000396172 CFBP00751 764 aa11.29□□□□□ -0.6
DDX39B-202ENST00000396172 MAPK4P31152 587 aa11.29□□□□□ -0.6
DDX39B-202ENST00000396172 HSD17B4P51659 736 aa11.29□□□□□ -0.6
DDX39B-202ENST00000396172 NPY5RQ15761 445 aa11.29□□□□□ -0.6
DDX39B-202ENST00000396172 NAP1L4Q99733 375 aaKnown RBP11.29□□□□□ -0.6
DDX39B-202ENST00000396172 GJB4Q9NTQ9 266 aa11.29□□□□□ -0.6
DDX39B-202ENST00000396172 SAGE1Q9NXZ1 904 aa11.29□□□□□ -0.6
DDX39B-202ENST00000396172 IVNS1ABPQ9Y6Y0 642 aa11.29□□□□□ -0.6
DDX39B-202ENST00000396172 BTBD18B2RXH4 712 aa11.29□□□□□ -0.6
DDX39B-202ENST00000396172 BCRP11274 1271 aa11.29□□□□□ -0.6
DDX39B-202ENST00000396172 TRAPPC10P48553 1259 aa11.29□□□□□ -0.6
DDX39B-202ENST00000396172 CLK2P49760 499 aaKnown RBP11.29□□□□□ -0.6
DDX39B-202ENST00000396172 RESTQ13127 1097 aa11.29□□□□□ -0.6
DDX39B-202ENST00000396172 CRHR2Q13324 411 aa11.29□□□□□ -0.6
DDX39B-202ENST00000396172 NONOQ15233 471 aaKnown RBP eCLIP11.29□□□□□ -0.6
DDX39B-202ENST00000396172 RILPL1Q5EBL4 403 aa11.29□□□□□ -0.6
DDX39B-202ENST00000396172 ATL3Q6DD88 541 aa11.29□□□□□ -0.6
DDX39B-202ENST00000396172 RNF207Q6ZRF8 634 aa11.29□□□□□ -0.6
DDX39B-202ENST00000396172 CLEC4DQ8WXI8 215 aa11.29□□□□□ -0.6
DDX39B-202ENST00000396172 SHISA4Q96DD7 197 aa11.29□□□□□ -0.6
DDX39B-202ENST00000396172 MPHOSPH6Q99547 160 aaKnown RBP11.29□□□□□ -0.6
DDX39B-202ENST00000396172 TXNRD2Q9NNW7 524 aa11.29□□□□□ -0.6
DDX39B-202ENST00000396172 B4DLN1 442 aa11.28□□□□□ -0.6
DDX39B-202ENST00000396172 M0R2N6 131 aa11.28□□□□□ -0.6
DDX39B-202ENST00000396172 NFIBO00712 420 aa11.28□□□□□ -0.6
DDX39B-202ENST00000396172 MEIS2O14770 477 aa11.28□□□□□ -0.6
DDX39B-202ENST00000396172 ERCC3P19447 782 aa11.28□□□□□ -0.6
DDX39B-202ENST00000396172 PKP1Q13835 747 aa11.28□□□□□ -0.6
DDX39B-202ENST00000396172 KCTD2Q14681 263 aa11.28□□□□□ -0.6
DDX39B-202ENST00000396172 MUM1L1Q5H9M0 696 aa11.28□□□□□ -0.6
DDX39B-202ENST00000396172 NSMFQ6X4W1 530 aa11.28□□□□□ -0.6
DDX39B-202ENST00000396172 FERMT3Q86UX7 667 aa11.28□□□□□ -0.6
DDX39B-202ENST00000396172 ABRAQ8N0Z2 381 aa11.28□□□□□ -0.6
DDX39B-202ENST00000396172 ANKRD35Q8N283 1001 aa11.28□□□□□ -0.6
DDX39B-202ENST00000396172 ZNF396Q96N95 335 aaPredicted RBP11.28□□□□□ -0.6
DDX39B-202ENST00000396172 PCDHA6Q9UN73 950 aa11.28□□□□□ -0.6
DDX39B-202ENST00000396172 PCDHA8Q9Y5H6 950 aa11.28□□□□□ -0.6
DDX39B-202ENST00000396172 WDR81Q562E7 1941 aa11.27□□□□□ -0.6
DDX39B-202ENST00000396172 OPLAHO14841 1288 aa11.27□□□□□ -0.6
DDX39B-202ENST00000396172 STRNO43815 780 aa11.27□□□□□ -0.6
DDX39B-202ENST00000396172 FCER1AP12319 257 aa11.27□□□□□ -0.6
DDX39B-202ENST00000396172 MAP2K1Q02750 393 aaPredicted RBP11.27□□□□□ -0.6
DDX39B-202ENST00000396172 NR5A1Q13285 461 aa11.27□□□□□ -0.6
DDX39B-202ENST00000396172 ORC2Q13416 577 aaPredicted RBP11.27□□□□□ -0.6
DDX39B-202ENST00000396172 WDR78Q5VTH9 848 aa11.27□□□□□ -0.6
DDX39B-202ENST00000396172 C17orf99Q6UX52 265 aa11.27□□□□□ -0.6
DDX39B-202ENST00000396172 TNFRSF25Q93038 417 aa11.27□□□□□ -0.6
DDX39B-202ENST00000396172 ZIC5Q96T25 663 aa11.27□□□□□ -0.6
DDX39B-202ENST00000396172 BEGAINQ9BUH8 593 aa11.27□□□□□ -0.6
DDX39B-202ENST00000396172 ANO3Q9BYT9 981 aa11.27□□□□□ -0.6
DDX39B-202ENST00000396172 BIN2Q9UBW5 565 aaPredicted RBP11.27□□□□□ -0.6
DDX39B-202ENST00000396172 RIPK3Q9Y572 518 aa11.27□□□□□ -0.6
DDX39B-202ENST00000396172 ZSWIM8A7E2V4 1837 aa11.27□□□□□ -0.61
DDX39B-202ENST00000396172 LOXHD1Q8IVV2 1947 aa11.27□□□□□ -0.61
DDX39B-202ENST00000396172 LOC102724159A0A0B4J2E5 919 aa11.27□□□□□ -0.61
DDX39B-202ENST00000396172 PWP2Q15269 919 aaKnown RBP11.27□□□□□ -0.61
DDX39B-202ENST00000396172 UBE2SQ16763 222 aa11.27□□□□□ -0.61
DDX39B-202ENST00000396172 MYSM1Q5VVJ2 828 aa11.27□□□□□ -0.61
DDX39B-202ENST00000396172 JAKMIP3Q5VZ66 844 aa11.27□□□□□ -0.61
DDX39B-202ENST00000396172 OXER1Q8TDS5 423 aa11.27□□□□□ -0.61
DDX39B-202ENST00000396172 MMP19Q99542 508 aa11.27□□□□□ -0.61
DDX39B-202ENST00000396172 A1CFQ9NQ94 594 aaKnown RBP11.27□□□□□ -0.61
DDX39B-202ENST00000396172 SLC5A4Q9NY91 659 aa11.27□□□□□ -0.61
DDX39B-202ENST00000396172 CPA4Q9UI42 421 aa11.27□□□□□ -0.61
DDX39B-202ENST00000396172 KIF28PB7ZC32 967 aa11.26□□□□□ -0.61
DDX39B-202ENST00000396172 BMP15O95972 392 aa11.26□□□□□ -0.61
DDX39B-202ENST00000396172 RPS6P62753 249 aaKnown RBP11.26□□□□□ -0.61
DDX39B-202ENST00000396172 KIF22Q14807 665 aa11.26□□□□□ -0.61
DDX39B-202ENST00000396172 FOXD4L5Q5VV16 416 aaPredicted RBP11.26□□□□□ -0.61
DDX39B-202ENST00000396172 USP17L6PQ6QN14 398 aa11.26□□□□□ -0.61
DDX39B-202ENST00000396172 POTEEQ6S8J3 1075 aa11.26□□□□□ -0.61
DDX39B-202ENST00000396172 PIK3AP1Q6ZUJ8 805 aa11.26□□□□□ -0.61
DDX39B-202ENST00000396172 DNERQ8NFT8 737 aa11.26□□□□□ -0.61
DDX39B-202ENST00000396172 FOXD4L4Q8WXT5 416 aaPredicted RBP11.26□□□□□ -0.61
DDX39B-202ENST00000396172 CYP39A1Q9NYL5 469 aa11.26□□□□□ -0.61
DDX39B-202ENST00000396172 ADD3Q9UEY8 706 aaKnown RBP11.26□□□□□ -0.61
DDX39B-202ENST00000396172 CFAP45Q9UL16 551 aa11.26□□□□□ -0.61
DDX39B-202ENST00000396172 CEP131Q9UPN4 1083 aa11.26□□□□□ -0.61
DDX39B-202ENST00000396172 ZDHHC9Q9Y397 364 aa11.26□□□□□ -0.61
DDX39B-202ENST00000396172 FRMPD4Q14CM0 1322 aa11.26□□□□□ -0.61
DDX39B-202ENST00000396172 GCFC2P16383 781 aaKnown RBP11.26□□□□□ -0.61
DDX39B-202ENST00000396172 TAL1P17542 331 aaPredicted RBP11.26□□□□□ -0.61
DDX39B-202ENST00000396172 HOXA13P31271 388 aaPredicted RBP11.26□□□□□ -0.61
DDX39B-202ENST00000396172 SREBF1P36956 1147 aa11.26□□□□□ -0.61
DDX39B-202ENST00000396172 KRT85P78386 507 aa11.26□□□□□ -0.61
DDX39B-202ENST00000396172 HTRA3P83110 453 aa11.26□□□□□ -0.61
DDX39B-202ENST00000396172 Q3C1V9 767 aa11.26□□□□□ -0.61
DDX39B-202ENST00000396172 SLC30A10Q6XR72 485 aa11.26□□□□□ -0.61
DDX39B-202ENST00000396172 PLEKHH3Q7Z736 793 aa11.26□□□□□ -0.61
DDX39B-202ENST00000396172 NEK8Q86SG6 692 aa11.26□□□□□ -0.61
DDX39B-202ENST00000396172 FCHSD1Q86WN1 690 aa11.26□□□□□ -0.61
DDX39B-202ENST00000396172 GBP4Q96PP9 640 aa11.26□□□□□ -0.61
DDX39B-202ENST00000396172 POTEB2H3BUK9 544 aa11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms