RNA–Protein interactions for RNA: ENST00000394224.3

SIPA1-201, Transcript of signal-induced proliferation-associated 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIPA1, Length 3,628 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIPA1-201ENST00000394224 AGPSO00116 658 aa18.6■□□□□ 0.57
SIPA1-201ENST00000394224 TRAF5O00463 557 aa18.6■□□□□ 0.57
SIPA1-201ENST00000394224 ERLIN2O94905 339 aa18.6■□□□□ 0.57
SIPA1-201ENST00000394224 PRPF4BQ13523 1007 aaKnown RBP18.6■□□□□ 0.57
SIPA1-201ENST00000394224 POTEDQ86YR6 584 aa18.6■□□□□ 0.57
SIPA1-201ENST00000394224 CCDC51Q96ER9 411 aa18.6■□□□□ 0.57
SIPA1-201ENST00000394224 FAM84BQ96KN1 310 aaPredicted RBP18.6■□□□□ 0.57
SIPA1-201ENST00000394224 CRNKL1Q9BZJ0 848 aaKnown RBP18.6■□□□□ 0.57
SIPA1-201ENST00000394224 SHTN1A0MZ66 631 aa18.6■□□□□ 0.57
SIPA1-201ENST00000394224 TCERG1LQ5VWI1 586 aa18.6■□□□□ 0.57
SIPA1-201ENST00000394224 ARHGAP20Q9P2F6 1191 aa18.6■□□□□ 0.57
SIPA1-201ENST00000394224 ADAMTS1Q9UHI8 967 aa18.6■□□□□ 0.57
SIPA1-201ENST00000394224 FBXO3Q9UK99 471 aa18.6■□□□□ 0.57
SIPA1-201ENST00000394224 SMCO2A6NFE2 343 aa18.6■□□□□ 0.57
SIPA1-201ENST00000394224 PDE6BP35913 854 aa18.6■□□□□ 0.57
SIPA1-201ENST00000394224 EPS15P42566 896 aa18.6■□□□□ 0.57
SIPA1-201ENST00000394224 DNM2P50570 870 aa18.6■□□□□ 0.57
SIPA1-201ENST00000394224 GRIK5Q16478 980 aa18.6■□□□□ 0.57
SIPA1-201ENST00000394224 P2RX5Q93086 422 aa18.6■□□□□ 0.57
SIPA1-201ENST00000394224 DUSP9Q99956 384 aaKnown RBP18.6■□□□□ 0.57
SIPA1-201ENST00000394224 POLR2FP61218 127 aaKnown RBP18.59■□□□□ 0.57
SIPA1-201ENST00000394224 CCDC47Q96A33 483 aaKnown RBP18.59■□□□□ 0.57
SIPA1-201ENST00000394224 SRP68Q9UHB9 627 aaKnown RBP18.59■□□□□ 0.57
SIPA1-201ENST00000394224 NPHP3-ACAD11A0A0J9YXS1 232 aa18.59■□□□□ 0.57
SIPA1-201ENST00000394224 KLRF2D3W0D1 207 aa18.59■□□□□ 0.57
SIPA1-201ENST00000394224 CARD10Q9BWT7 1032 aa18.59■□□□□ 0.57
SIPA1-201ENST00000394224 PLA2G12BQ9BX93 195 aa18.59■□□□□ 0.57
SIPA1-201ENST00000394224 PACSIN1Q9BY11 444 aa18.59■□□□□ 0.57
SIPA1-201ENST00000394224 MED4Q9NPJ6 270 aa18.59■□□□□ 0.57
SIPA1-201ENST00000394224 CDHR2Q9BYE9 1310 aa18.59■□□□□ 0.57
SIPA1-201ENST00000394224 HSF2BPO75031 334 aa18.59■□□□□ 0.57
SIPA1-201ENST00000394224 PPFIA4O75335 1185 aa18.59■□□□□ 0.57
SIPA1-201ENST00000394224 LRRC47Q8N1G4 583 aaKnown RBP18.59■□□□□ 0.57
SIPA1-201ENST00000394224 CAPN11Q9UMQ6 739 aa18.59■□□□□ 0.57
SIPA1-201ENST00000394224 MYH10P35580 1976 aa18.58■□□□□ 0.57
SIPA1-201ENST00000394224 RASSF10A6NK89 507 aa18.58■□□□□ 0.57
SIPA1-201ENST00000394224 UBE2SQ16763 222 aa18.58■□□□□ 0.57
SIPA1-201ENST00000394224 PFKFB3Q16875 520 aaPredicted RBP18.58■□□□□ 0.57
SIPA1-201ENST00000394224 NBPF9Q3BBW0 867 aa18.58■□□□□ 0.57
SIPA1-201ENST00000394224 SOGA3Q5TF21 947 aa18.58■□□□□ 0.57
SIPA1-201ENST00000394224 SLC30A10Q6XR72 485 aa18.58■□□□□ 0.57
SIPA1-201ENST00000394224 TBCKQ8TEA7 893 aa18.58■□□□□ 0.57
SIPA1-201ENST00000394224 NUDT12Q9BQG2 462 aa18.58■□□□□ 0.57
SIPA1-201ENST00000394224 SEPT11Q9NVA2 429 aaKnown RBP18.58■□□□□ 0.57
SIPA1-201ENST00000394224 RBM28Q9NW13 759 aaKnown RBP18.58■□□□□ 0.57
SIPA1-201ENST00000394224 ARFGEF2Q9Y6D5 1785 aa18.58■□□□□ 0.56
SIPA1-201ENST00000394224 CYTH3O43739 400 aa18.58■□□□□ 0.56
SIPA1-201ENST00000394224 KIF5BP33176 963 aa18.58■□□□□ 0.56
SIPA1-201ENST00000394224 MAGEA9P43362 315 aa18.58■□□□□ 0.56
SIPA1-201ENST00000394224 CKAP4Q07065 602 aaKnown RBP18.58■□□□□ 0.56
SIPA1-201ENST00000394224 SH3RF3Q8TEJ3 882 aaPredicted RBP18.58■□□□□ 0.56
SIPA1-201ENST00000394224 MTMR8Q96EF0 704 aa18.58■□□□□ 0.56
SIPA1-201ENST00000394224 OSBPL9Q96SU4 736 aa18.58■□□□□ 0.56
SIPA1-201ENST00000394224 KRT18P05783 430 aaKnown RBP18.57■□□□□ 0.56
SIPA1-201ENST00000394224 GLI1P08151 1106 aa18.57■□□□□ 0.56
SIPA1-201ENST00000394224 SLC16A2P36021 539 aa18.57■□□□□ 0.56
SIPA1-201ENST00000394224 PIGSQ96S52 555 aa18.57■□□□□ 0.56
SIPA1-201ENST00000394224 PCDHA6Q9UN73 950 aa18.57■□□□□ 0.56
SIPA1-201ENST00000394224 PCDHA8Q9Y5H6 950 aa18.57■□□□□ 0.56
SIPA1-201ENST00000394224 HEXIM1O94992 359 aaKnown RBP18.57■□□□□ 0.56
SIPA1-201ENST00000394224 IRX3P78415 501 aaPredicted RBP18.57■□□□□ 0.56
SIPA1-201ENST00000394224 NNTQ13423 1086 aa18.57■□□□□ 0.56
SIPA1-201ENST00000394224 TTI2Q6NXR4 508 aa18.57■□□□□ 0.56
SIPA1-201ENST00000394224 TDP2O95551 362 aa18.57■□□□□ 0.56
SIPA1-201ENST00000394224 IL17RBQ9NRM6 502 aa18.57■□□□□ 0.56
SIPA1-201ENST00000394224 SLAIN2Q9P270 581 aa18.57■□□□□ 0.56
SIPA1-201ENST00000394224 MINPP1Q9UNW1 487 aa18.57■□□□□ 0.56
SIPA1-201ENST00000394224 FRMD3A2A2Y4 597 aa18.56■□□□□ 0.56
SIPA1-201ENST00000394224 COPB2P35606 906 aa18.56■□□□□ 0.56
SIPA1-201ENST00000394224 FAM133AQ8N9E0 248 aa18.56■□□□□ 0.56
SIPA1-201ENST00000394224 TBC1D5Q92609 795 aa18.56■□□□□ 0.56
SIPA1-201ENST00000394224 KAT2BQ92831 832 aa18.56■□□□□ 0.56
SIPA1-201ENST00000394224 PCDHA4Q9UN74 947 aa18.56■□□□□ 0.56
SIPA1-201ENST00000394224 PSMD14O00487 310 aa18.56■□□□□ 0.56
SIPA1-201ENST00000394224 INPP5BP32019 993 aa18.56■□□□□ 0.56
SIPA1-201ENST00000394224 SNAP25P60880 206 aa18.56■□□□□ 0.56
SIPA1-201ENST00000394224 IFT88Q13099 833 aa18.56■□□□□ 0.56
SIPA1-201ENST00000394224 CEP85LQ5SZL2 805 aa18.56■□□□□ 0.56
SIPA1-201ENST00000394224 CFAP58Q5T655 872 aa18.56■□□□□ 0.56
SIPA1-201ENST00000394224 NDST4Q9H3R1 872 aa18.56■□□□□ 0.56
SIPA1-201ENST00000394224 SEMA6BQ9H3T3 888 aa18.56■□□□□ 0.56
SIPA1-201ENST00000394224 KIAA0754O94854 1291 aa18.56■□□□□ 0.56
SIPA1-201ENST00000394224 BMP15O95972 392 aa18.56■□□□□ 0.56
SIPA1-201ENST00000394224 PPM1EQ8WY54 764 aa18.56■□□□□ 0.56
SIPA1-201ENST00000394224 TNFRSF25Q93038 417 aa18.56■□□□□ 0.56
SIPA1-201ENST00000394224 ZIM3Q96PE6 472 aa18.56■□□□□ 0.56
SIPA1-201ENST00000394224 TRIM9Q9C026 710 aa18.56■□□□□ 0.56
SIPA1-201ENST00000394224 GOPCQ9HD26 462 aa18.56■□□□□ 0.56
SIPA1-201ENST00000394224 E7EVH7 732 aa18.55■□□□□ 0.56
SIPA1-201ENST00000394224 PALMO75781 387 aa18.55■□□□□ 0.56
SIPA1-201ENST00000394224 ACTN1P12814 892 aa18.55■□□□□ 0.56
SIPA1-201ENST00000394224 TAL1P17542 331 aaPredicted RBP18.55■□□□□ 0.56
SIPA1-201ENST00000394224 HIBADHP31937 336 aaKnown RBP18.55■□□□□ 0.56
SIPA1-201ENST00000394224 ICE2Q659A1 982 aa18.55■□□□□ 0.56
SIPA1-201ENST00000394224 CREG2Q8IUH2 290 aa18.55■□□□□ 0.56
SIPA1-201ENST00000394224 ALS2CR12Q96Q35 445 aa18.55■□□□□ 0.56
SIPA1-201ENST00000394224 CCDC87Q9NVE4 849 aa18.55■□□□□ 0.56
SIPA1-201ENST00000394224 TLDC2A0PJX2 215 aa18.55■□□□□ 0.56
SIPA1-201ENST00000394224 ZBED6P86452 979 aa18.55■□□□□ 0.56
SIPA1-201ENST00000394224 ITPK1Q13572 414 aa18.55■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms