RNA–Protein interactions for RNA: ENST00000392249.6

STRADB-202, Transcript of STE20-related kinase adaptor beta, humanhuman

TSL 1 (best) BASIC

Gene STRADB, Length 2,190 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
STRADB-202ENST00000392249 CALML4Q96GE6 196 aa20.85■□□□□ 0.93
STRADB-202ENST00000392249 TMX1Q9H3N1 280 aa20.85■□□□□ 0.93
STRADB-202ENST00000392249 ADD3Q9UEY8 706 aaKnown RBP20.85■□□□□ 0.93
STRADB-202ENST00000392249 POTEMA6NI47 508 aa20.84■□□□□ 0.93
STRADB-202ENST00000392249 VIL1P09327 827 aaKnown RBP20.84■□□□□ 0.93
STRADB-202ENST00000392249 KCNJ6P48051 423 aa20.84■□□□□ 0.93
STRADB-202ENST00000392249 FXR2P51116 673 aaKnown RBP eCLIP20.84■□□□□ 0.93
STRADB-202ENST00000392249 SNAP25P60880 206 aa20.84■□□□□ 0.93
STRADB-202ENST00000392249 DLGAP5Q15398 846 aa20.84■□□□□ 0.93
STRADB-202ENST00000392249 GMCL1P1Q8NEA9 526 aa20.84■□□□□ 0.93
STRADB-202ENST00000392249 CTAGE1Q96RT6 745 aa20.84■□□□□ 0.93
STRADB-202ENST00000392249 XPO5Q9HAV4 1204 aaKnown RBP eCLIP20.84■□□□□ 0.93
STRADB-202ENST00000392249 RHOBTB3O94955 611 aa20.83■□□□□ 0.93
STRADB-202ENST00000392249 ADKP55263 362 aaKnown RBP20.83■□□□□ 0.93
STRADB-202ENST00000392249 IKQ13123 557 aaPredicted RBP20.83■□□□□ 0.93
STRADB-202ENST00000392249 PPP4R3AQ6IN85 833 aa20.83■□□□□ 0.93
STRADB-202ENST00000392249 ADSSL1Q8N142 457 aa20.83■□□□□ 0.93
STRADB-202ENST00000392249 OGFOD1Q8N543 542 aa20.83■□□□□ 0.93
STRADB-202ENST00000392249 PPP1R13BQ96KQ4 1090 aa20.83■□□□□ 0.93
STRADB-202ENST00000392249 GMLQ99445 158 aa20.83■□□□□ 0.93
STRADB-202ENST00000392249 TRIM9Q9C026 710 aa20.83■□□□□ 0.93
STRADB-202ENST00000392249 ZNF70Q9UC06 446 aaPredicted RBP20.83■□□□□ 0.93
STRADB-202ENST00000392249 DDX25Q9UHL0 483 aaKnown RBP20.83■□□□□ 0.93
STRADB-202ENST00000392249 TRIM49BA6NDI0 452 aa20.83■□□□□ 0.92
STRADB-202ENST00000392249 TSC1Q92574 1164 aa20.83■□□□□ 0.92
STRADB-202ENST00000392249 HDAC9Q9UKV0 1011 aa20.83■□□□□ 0.92
STRADB-202ENST00000392249 ATF5Q9Y2D1 282 aaPredicted RBP20.83■□□□□ 0.92
STRADB-202ENST00000392249 GTF2F1P35269 517 aaKnown RBP eCLIP20.82■□□□□ 0.92
STRADB-202ENST00000392249 CCT6AP40227 531 aaKnown RBP20.82■□□□□ 0.92
STRADB-202ENST00000392249 GRB10Q13322 594 aa20.82■□□□□ 0.92
STRADB-202ENST00000392249 TMEM139Q8IV31 216 aa20.82■□□□□ 0.92
STRADB-202ENST00000392249 TC2NQ8N9U0 490 aa20.82■□□□□ 0.92
STRADB-202ENST00000392249 GMCL1Q96IK5 515 aa20.82■□□□□ 0.92
STRADB-202ENST00000392249 HERC5Q9UII4 1024 aaKnown RBP20.82■□□□□ 0.92
STRADB-202ENST00000392249 A0A1W2PRG0 241 aa20.82■□□□□ 0.92
STRADB-202ENST00000392249 PSDA5PKW4 1024 aaPredicted RBP20.82■□□□□ 0.92
STRADB-202ENST00000392249 ASIC1P78348 528 aa20.82■□□□□ 0.92
STRADB-202ENST00000392249 KRT31Q15323 416 aa20.82■□□□□ 0.92
STRADB-202ENST00000392249 FILIP1LQ4L180 1135 aa20.82■□□□□ 0.92
STRADB-202ENST00000392249 GIMAP8Q8ND71 665 aaPredicted RBP20.82■□□□□ 0.92
STRADB-202ENST00000392249 GJA10Q969M2 543 aa20.82■□□□□ 0.92
STRADB-202ENST00000392249 RAB34Q9BZG1 259 aa20.82■□□□□ 0.92
STRADB-202ENST00000392249 CREBRFQ8IUR6 639 aa20.81■□□□□ 0.92
STRADB-202ENST00000392249 SPICE1Q8N0Z3 855 aa20.81■□□□□ 0.92
STRADB-202ENST00000392249 CDK5RAP3Q96JB5 506 aa20.81■□□□□ 0.92
STRADB-202ENST00000392249 VEZTQ9HBM0 779 aa20.81■□□□□ 0.92
STRADB-202ENST00000392249 BMP3P12645 472 aa20.8■□□□□ 0.92
STRADB-202ENST00000392249 PMS1P54277 932 aaKnown RBP20.8■□□□□ 0.92
STRADB-202ENST00000392249 USH1GQ495M9 461 aa20.8■□□□□ 0.92
STRADB-202ENST00000392249 HAS1Q92839 578 aa20.8■□□□□ 0.92
STRADB-202ENST00000392249 PNMA5Q96PV4 448 aa20.8■□□□□ 0.92
STRADB-202ENST00000392249 C7orf25Q9BPX7 421 aa20.8■□□□□ 0.92
STRADB-202ENST00000392249 GLT8D2Q9H1C3 349 aa20.8■□□□□ 0.92
STRADB-202ENST00000392249 PAXBP1Q9Y5B6 917 aa20.8■□□□□ 0.92
STRADB-202ENST00000392249 PBX1P40424 430 aa20.8■□□□□ 0.92
STRADB-202ENST00000392249 RBM10P98175 930 aaKnown RBP20.8■□□□□ 0.92
STRADB-202ENST00000392249 PDE4DQ08499 809 aa20.8■□□□□ 0.92
STRADB-202ENST00000392249 STIM1Q13586 685 aa20.8■□□□□ 0.92
STRADB-202ENST00000392249 PDIA5Q14554 519 aa20.8■□□□□ 0.92
STRADB-202ENST00000392249 SYDE2Q5VT97 1194 aa20.8■□□□□ 0.92
STRADB-202ENST00000392249 SNX29Q8TEQ0 813 aa20.8■□□□□ 0.92
STRADB-202ENST00000392249 FAM151AQ8WW52 585 aa20.8■□□□□ 0.92
STRADB-202ENST00000392249 BAG1Q99933 345 aaPredicted RBP20.8■□□□□ 0.92
STRADB-202ENST00000392249 NUDT12Q9BQG2 462 aa20.8■□□□□ 0.92
STRADB-202ENST00000392249 AMNQ9BXJ7 453 aa20.8■□□□□ 0.92
STRADB-202ENST00000392249 BLOC1S4Q9NUP1 217 aa20.8■□□□□ 0.92
STRADB-202ENST00000392249 EXOC1Q9NV70 894 aa20.8■□□□□ 0.92
STRADB-202ENST00000392249 LIMA1Q9UHB6 759 aaKnown RBP20.8■□□□□ 0.92
STRADB-202ENST00000392249 CNTNAP1P78357 1384 aa20.8■□□□□ 0.92
STRADB-202ENST00000392249 KCNJ18B7U540 433 aa20.79■□□□□ 0.92
STRADB-202ENST00000392249 MARCH6O60337 910 aa20.79■□□□□ 0.92
STRADB-202ENST00000392249 GCFC2P16383 781 aaKnown RBP20.79■□□□□ 0.92
STRADB-202ENST00000392249 ECE1P42892 770 aa20.79■□□□□ 0.92
STRADB-202ENST00000392249 AMPD3Q01432 767 aa20.79■□□□□ 0.92
STRADB-202ENST00000392249 SPAG1Q07617 926 aa20.79■□□□□ 0.92
STRADB-202ENST00000392249 KCNJ12Q14500 433 aa20.79■□□□□ 0.92
STRADB-202ENST00000392249 SPDYE2Q495Y8 402 aa20.79■□□□□ 0.92
STRADB-202ENST00000392249 TCP11X2Q5H9J9 407 aa20.79■□□□□ 0.92
STRADB-202ENST00000392249 UIMC1Q96RL1 719 aa20.79■□□□□ 0.92
STRADB-202ENST00000392249 ANO3Q9BYT9 981 aa20.79■□□□□ 0.92
STRADB-202ENST00000392249 VPS16Q9H269 839 aa20.79■□□□□ 0.92
STRADB-202ENST00000392249 TAB2Q9NYJ8 693 aa20.79■□□□□ 0.92
STRADB-202ENST00000392249 PSMA7O14818 248 aa20.79■□□□□ 0.92
STRADB-202ENST00000392249 TAL1P17542 331 aaPredicted RBP20.79■□□□□ 0.92
STRADB-202ENST00000392249 MCM6Q14566 821 aa20.79■□□□□ 0.92
STRADB-202ENST00000392249 KRT79Q5XKE5 535 aa20.79■□□□□ 0.92
STRADB-202ENST00000392249 SV2BQ7L1I2 683 aa20.79■□□□□ 0.92
STRADB-202ENST00000392249 FBXO11Q86XK2 927 aa20.79■□□□□ 0.92
STRADB-202ENST00000392249 NIM1KQ8IY84 436 aa20.79■□□□□ 0.92
STRADB-202ENST00000392249 CCDC47Q96A33 483 aaKnown RBP20.79■□□□□ 0.92
STRADB-202ENST00000392249 STK17AQ9UEE5 414 aa20.79■□□□□ 0.92
STRADB-202ENST00000392249 H7C1D1 291 aa20.78■□□□□ 0.92
STRADB-202ENST00000392249 MEIS2O14770 477 aa20.78■□□□□ 0.92
STRADB-202ENST00000392249 N4BP3O15049 544 aa20.78■□□□□ 0.92
STRADB-202ENST00000392249 ARHGAP6O43182 974 aa20.78■□□□□ 0.92
STRADB-202ENST00000392249 STK4Q13043 487 aa20.78■□□□□ 0.92
STRADB-202ENST00000392249 SEMA3FQ13275 785 aa20.78■□□□□ 0.92
STRADB-202ENST00000392249 CDAN1Q8IWY9 1227 aa20.78■□□□□ 0.92
STRADB-202ENST00000392249 ANKRD20A12PQ8NF67 263 aa20.78■□□□□ 0.92
STRADB-202ENST00000392249 SLC16A10Q8TF71 515 aa20.78■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms