RNA–Protein interactions for RNA: ENST00000373010.5

USP49-202, Transcript of ubiquitin specific peptidase 49, humanhuman

TSL 5 BASIC

Gene USP49, Length 2,446 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP49-202ENST00000373010 TPM1P09493 284 aa21.02■□□□□ 0.96
USP49-202ENST00000373010 FCER1AP12319 257 aa21.02■□□□□ 0.96
USP49-202ENST00000373010 EEF2KMTQ96G04 330 aa21.02■□□□□ 0.96
USP49-202ENST00000373010 NUP88Q99567 741 aaPredicted RBP21.02■□□□□ 0.96
USP49-202ENST00000373010 CASQ1P31415 396 aa21.02■□□□□ 0.95
USP49-202ENST00000373010 HPS3Q969F9 1004 aa21.02■□□□□ 0.95
USP49-202ENST00000373010 PNMA5Q96PV4 448 aa21.02■□□□□ 0.95
USP49-202ENST00000373010 DUSP9Q99956 384 aaKnown RBP21.02■□□□□ 0.95
USP49-202ENST00000373010 IRX2Q9BZI1 471 aaPredicted RBP21.02■□□□□ 0.95
USP49-202ENST00000373010 EHD4Q9H223 541 aa21.02■□□□□ 0.95
USP49-202ENST00000373010 LZTFL1Q9NQ48 299 aa21.02■□□□□ 0.95
USP49-202ENST00000373010 SLX4Q8IY92 1834 aa21.01■□□□□ 0.95
USP49-202ENST00000373010 POTEMA6NI47 508 aa21.01■□□□□ 0.95
USP49-202ENST00000373010 GPATCH4Q5T3I0 446 aaKnown RBP21.01■□□□□ 0.95
USP49-202ENST00000373010 FLAD1Q8NFF5 587 aa21.01■□□□□ 0.95
USP49-202ENST00000373010 CCDC51Q96ER9 411 aa21.01■□□□□ 0.95
USP49-202ENST00000373010 THAP9Q9H5L6 903 aa21.01■□□□□ 0.95
USP49-202ENST00000373010 BLOC1S4Q9NUP1 217 aa21.01■□□□□ 0.95
USP49-202ENST00000373010 FAM198AQ9UFP1 575 aa21.01■□□□□ 0.95
USP49-202ENST00000373010 C10orf71Q711Q0 1435 aa21.01■□□□□ 0.95
USP49-202ENST00000373010 MYH7BA7E2Y1 1941 aa21.01■□□□□ 0.95
USP49-202ENST00000373010 PES1O00541 588 aaKnown RBP21■□□□□ 0.95
USP49-202ENST00000373010 ZBTB5O15062 677 aa21■□□□□ 0.95
USP49-202ENST00000373010 ECE2O60344 883 aa21■□□□□ 0.95
USP49-202ENST00000373010 FXR2P51116 673 aaKnown RBP eCLIP21■□□□□ 0.95
USP49-202ENST00000373010 CBX1P83916 185 aa21■□□□□ 0.95
USP49-202ENST00000373010 DACT2Q5SW24 774 aa21■□□□□ 0.95
USP49-202ENST00000373010 PPP1R18Q6NYC8 613 aa21■□□□□ 0.95
USP49-202ENST00000373010 CCDC47Q96A33 483 aaKnown RBP21■□□□□ 0.95
USP49-202ENST00000373010 DHTKD1Q96HY7 919 aaPredicted RBP21■□□□□ 0.95
USP49-202ENST00000373010 ABHD10Q9NUJ1 306 aa21■□□□□ 0.95
USP49-202ENST00000373010 ERVK-24P63145 666 aa21■□□□□ 0.95
USP49-202ENST00000373010 MCM6Q14566 821 aa21■□□□□ 0.95
USP49-202ENST00000373010 FBXO38Q6PIJ6 1188 aa21■□□□□ 0.95
USP49-202ENST00000373010 SH3BP5LQ7L8J4 393 aa21■□□□□ 0.95
USP49-202ENST00000373010 ZNF397Q8NF99 534 aaPredicted RBP21■□□□□ 0.95
USP49-202ENST00000373010 KIFC2Q96AC6 838 aa21■□□□□ 0.95
USP49-202ENST00000373010 CCDC17Q96LX7 622 aa21■□□□□ 0.95
USP49-202ENST00000373010 NUDT12Q9BQG2 462 aa21■□□□□ 0.95
USP49-202ENST00000373010 LGALS16A8MUM7 142 aa20.99■□□□□ 0.95
USP49-202ENST00000373010 EEF2P13639 858 aaKnown RBP20.99■□□□□ 0.95
USP49-202ENST00000373010 FECHP22830 423 aa20.99■□□□□ 0.95
USP49-202ENST00000373010 EEF1GP26641 437 aaKnown RBP20.99■□□□□ 0.95
USP49-202ENST00000373010 CLK2P49760 499 aaKnown RBP20.99■□□□□ 0.95
USP49-202ENST00000373010 AMPD3Q01432 767 aa20.99■□□□□ 0.95
USP49-202ENST00000373010 SEMA3FQ13275 785 aa20.99■□□□□ 0.95
USP49-202ENST00000373010 TMEM266Q2M3C6 531 aa20.99■□□□□ 0.95
USP49-202ENST00000373010 ANKRD40Q6AI12 368 aa20.99■□□□□ 0.95
USP49-202ENST00000373010 ZSCAN29Q8IWY8 852 aaPredicted RBP20.99■□□□□ 0.95
USP49-202ENST00000373010 CSGALNACT2Q8N6G5 542 aa20.99■□□□□ 0.95
USP49-202ENST00000373010 MB21D1Q8N884 522 aa20.99■□□□□ 0.95
USP49-202ENST00000373010 CUL5Q93034 780 aa20.99■□□□□ 0.95
USP49-202ENST00000373010 P2RX5Q93086 422 aa20.99■□□□□ 0.95
USP49-202ENST00000373010 GJA10Q969M2 543 aa20.99■□□□□ 0.95
USP49-202ENST00000373010 CARD6Q9BX69 1037 aa20.99■□□□□ 0.95
USP49-202ENST00000373010 CHRNA5P30532 468 aa20.99■□□□□ 0.95
USP49-202ENST00000373010 STRIP1Q5VSL9 837 aa20.99■□□□□ 0.95
USP49-202ENST00000373010 SV2BQ7L1I2 683 aa20.99■□□□□ 0.95
USP49-202ENST00000373010 MTMR8Q96EF0 704 aa20.99■□□□□ 0.95
USP49-202ENST00000373010 CCNE1P24864 410 aa20.98■□□□□ 0.95
USP49-202ENST00000373010 KRT9P35527 623 aa20.98■□□□□ 0.95
USP49-202ENST00000373010 ACRBPQ8NEB7 543 aa20.98■□□□□ 0.95
USP49-202ENST00000373010 PSTPIP2Q9H939 334 aa20.98■□□□□ 0.95
USP49-202ENST00000373010 MAGEC2Q9UBF1 373 aaPredicted RBP20.98■□□□□ 0.95
USP49-202ENST00000373010 MYMKA6NI61 221 aa20.98■□□□□ 0.95
USP49-202ENST00000373010 H0YIN7 160 aa20.98■□□□□ 0.95
USP49-202ENST00000373010 TRIM14Q14142 442 aa20.98■□□□□ 0.95
USP49-202ENST00000373010 CERKLQ49MI3 558 aaPredicted RBP20.98■□□□□ 0.95
USP49-202ENST00000373010 KIAA0895Q8NCT3 520 aa20.98■□□□□ 0.95
USP49-202ENST00000373010 ZNF507Q8TCN5 953 aa20.98■□□□□ 0.95
USP49-202ENST00000373010 CDK5RAP3Q96JB5 506 aa20.98■□□□□ 0.95
USP49-202ENST00000373010 SLC39A2Q9NP94 309 aa20.98■□□□□ 0.95
USP49-202ENST00000373010 MRPL12P52815 198 aaKnown RBP20.97■□□□□ 0.95
USP49-202ENST00000373010 MNS1Q8NEH6 495 aa20.97■□□□□ 0.95
USP49-202ENST00000373010 SNX29Q8TEQ0 813 aa20.97■□□□□ 0.95
USP49-202ENST00000373010 UIMC1Q96RL1 719 aa20.97■□□□□ 0.95
USP49-202ENST00000373010 DHX36Q9H2U1 1008 aaKnown RBP20.97■□□□□ 0.95
USP49-202ENST00000373010 DDX25Q9UHL0 483 aaKnown RBP20.97■□□□□ 0.95
USP49-202ENST00000373010 ZNF646O15015 1829 aaPredicted RBP20.97■□□□□ 0.95
USP49-202ENST00000373010 B4DLN1 442 aa20.97■□□□□ 0.95
USP49-202ENST00000373010 SEPT2Q15019 361 aa20.97■□□□□ 0.95
USP49-202ENST00000373010 QRICH1Q2TAL8 776 aa20.97■□□□□ 0.95
USP49-202ENST00000373010 DYMQ7RTS9 669 aa20.97■□□□□ 0.95
USP49-202ENST00000373010 KCNK18Q7Z418 384 aa20.97■□□□□ 0.95
USP49-202ENST00000373010 TMTC1Q8IUR5 882 aa20.97■□□□□ 0.95
USP49-202ENST00000373010 LARP4BQ92615 738 aaKnown RBP20.97■□□□□ 0.95
USP49-202ENST00000373010 PI4KBQ9UBF8 816 aa20.97■□□□□ 0.95
USP49-202ENST00000373010 TTC26A0AVF1 554 aa20.96■□□□□ 0.95
USP49-202ENST00000373010 USP17L15C9J2P7 530 aa20.96■□□□□ 0.95
USP49-202ENST00000373010 USP17L13C9JLJ4 530 aa20.96■□□□□ 0.95
USP49-202ENST00000373010 USP17L11C9JVI0 530 aa20.96■□□□□ 0.95
USP49-202ENST00000373010 USP17L18D6R9N7 530 aa20.96■□□□□ 0.95
USP49-202ENST00000373010 USP17L22D6RA61 530 aa20.96■□□□□ 0.95
USP49-202ENST00000373010 USP17L17D6RBQ6 530 aa20.96■□□□□ 0.95
USP49-202ENST00000373010 USP17L19D6RCP7 530 aa20.96■□□□□ 0.95
USP49-202ENST00000373010 USP17L20D6RJB6 530 aa20.96■□□□□ 0.95
USP49-202ENST00000373010 SLC1A4P43007 532 aa20.96■□□□□ 0.95
USP49-202ENST00000373010 USP17L24Q0WX57 530 aa20.96■□□□□ 0.95
USP49-202ENST00000373010 SLFN13Q68D06 897 aa20.96■□□□□ 0.95
USP49-202ENST00000373010 PPP4R3AQ6IN85 833 aa20.96■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms