RNA–Protein interactions for RNA: ENST00000372390.8

TSC22D3-205, Transcript of TSC22 domain family member 3, humanhuman

TSL 1 (best) BASIC

Gene TSC22D3, Length 1,812 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSC22D3-205ENST00000372390 MORF4L1Q9UBU8 362 aa23.71■■□□□ 1.39
TSC22D3-205ENST00000372390 CPA4Q9UI42 421 aa23.71■■□□□ 1.39
TSC22D3-205ENST00000372390 MRPL11Q9Y3B7 192 aaKnown RBP23.71■■□□□ 1.39
TSC22D3-205ENST00000372390 RBBP6Q7Z6E9 1792 aaKnown RBP23.71■■□□□ 1.39
TSC22D3-205ENST00000372390 MEIS2O14770 477 aa23.7■■□□□ 1.39
TSC22D3-205ENST00000372390 BAG4O95429 457 aaKnown RBP23.7■■□□□ 1.39
TSC22D3-205ENST00000372390 HOXA13P31271 388 aaPredicted RBP23.7■■□□□ 1.39
TSC22D3-205ENST00000372390 MYSM1Q5VVJ2 828 aa23.7■■□□□ 1.39
TSC22D3-205ENST00000372390 PIK3AP1Q6ZUJ8 805 aa23.7■■□□□ 1.39
TSC22D3-205ENST00000372390 REXO1Q8N1G1 1221 aaKnown RBP23.7■■□□□ 1.39
TSC22D3-205ENST00000372390 SPATC1LQ9H0A9 340 aa23.7■■□□□ 1.39
TSC22D3-205ENST00000372390 TFIP11Q9UBB9 837 aaKnown RBP23.7■■□□□ 1.39
TSC22D3-205ENST00000372390 COPB2P35606 906 aa23.7■■□□□ 1.38
TSC22D3-205ENST00000372390 STAT3P40763 770 aa23.7■■□□□ 1.38
TSC22D3-205ENST00000372390 CLK2P49760 499 aaKnown RBP23.7■■□□□ 1.38
TSC22D3-205ENST00000372390 TRERF1Q96PN7 1200 aa23.7■■□□□ 1.38
TSC22D3-205ENST00000372390 R3HDMLQ9H3Y0 253 aa23.7■■□□□ 1.38
TSC22D3-205ENST00000372390 RNF146Q9NTX7 359 aa23.7■■□□□ 1.38
TSC22D3-205ENST00000372390 BCRP11274 1271 aa23.69■■□□□ 1.38
TSC22D3-205ENST00000372390 MRPL12P52815 198 aaKnown RBP23.69■■□□□ 1.38
TSC22D3-205ENST00000372390 C17orf99Q6UX52 265 aa23.69■■□□□ 1.38
TSC22D3-205ENST00000372390 CNPY2Q9Y2B0 182 aa23.69■■□□□ 1.38
TSC22D3-205ENST00000372390 WNT7AO00755 349 aa23.68■■□□□ 1.38
TSC22D3-205ENST00000372390 CFBP00751 764 aa23.68■■□□□ 1.38
TSC22D3-205ENST00000372390 TOB1P50616 345 aaPredicted RBP23.68■■□□□ 1.38
TSC22D3-205ENST00000372390 NBR1Q14596 966 aa23.68■■□□□ 1.38
TSC22D3-205ENST00000372390 Q3C1V9 767 aa23.68■■□□□ 1.38
TSC22D3-205ENST00000372390 BICD2Q8TD16 824 aa23.68■■□□□ 1.38
TSC22D3-205ENST00000372390 MYH7BA7E2Y1 1941 aa23.68■■□□□ 1.38
TSC22D3-205ENST00000372390 TBC1D8O95759 1140 aa23.68■■□□□ 1.38
TSC22D3-205ENST00000372390 RIOX2Q8IUF8 465 aa23.68■■□□□ 1.38
TSC22D3-205ENST00000372390 GDPD2Q9HCC8 539 aa23.68■■□□□ 1.38
TSC22D3-205ENST00000372390 ATP6V1DQ9Y5K8 247 aa23.68■■□□□ 1.38
TSC22D3-205ENST00000372390 SLC25A27O95847 323 aa23.67■■□□□ 1.38
TSC22D3-205ENST00000372390 NCLP19338 710 aaKnown RBP23.67■■□□□ 1.38
TSC22D3-205ENST00000372390 CEBPZQ03701 1054 aaKnown RBP23.67■■□□□ 1.38
TSC22D3-205ENST00000372390 TKFCQ3LXA3 575 aa23.67■■□□□ 1.38
TSC22D3-205ENST00000372390 CCAR1Q8IX12 1150 aaKnown RBP23.67■■□□□ 1.38
TSC22D3-205ENST00000372390 USP28Q96RU2 1077 aa23.67■■□□□ 1.38
TSC22D3-205ENST00000372390 MOV10L1Q9BXT6 1211 aaKnown RBP23.67■■□□□ 1.38
TSC22D3-205ENST00000372390 WBP1LQ9NX94 342 aa23.67■■□□□ 1.38
TSC22D3-205ENST00000372390 CCDC194A0A1B0GVG4 234 aa23.66■■□□□ 1.38
TSC22D3-205ENST00000372390 ATP2B1P20020 1258 aa23.66■■□□□ 1.38
TSC22D3-205ENST00000372390 CLEC17AQ6ZS10 378 aa23.66■■□□□ 1.38
TSC22D3-205ENST00000372390 INF2Q27J81 1249 aa23.66■■□□□ 1.38
TSC22D3-205ENST00000372390 JMYQ8N9B5 988 aa23.66■■□□□ 1.38
TSC22D3-205ENST00000372390 SHCBP1Q8NEM2 672 aa23.66■■□□□ 1.38
TSC22D3-205ENST00000372390 GCOM1H8Y6P7 765 aaPredicted RBP23.65■■□□□ 1.38
TSC22D3-205ENST00000372390 POLR2MP0CAP2 368 aa23.65■■□□□ 1.38
TSC22D3-205ENST00000372390 KRT25Q7Z3Z0 450 aa23.65■■□□□ 1.38
TSC22D3-205ENST00000372390 FCHSD1Q86WN1 690 aa23.65■■□□□ 1.38
TSC22D3-205ENST00000372390 NCAPG2Q86XI2 1143 aa23.65■■□□□ 1.38
TSC22D3-205ENST00000372390 GLT8D2Q9H1C3 349 aa23.65■■□□□ 1.38
TSC22D3-205ENST00000372390 COL20A1Q9P218 1284 aa23.65■■□□□ 1.38
TSC22D3-205ENST00000372390 FBXO40Q9UH90 709 aa23.65■■□□□ 1.38
TSC22D3-205ENST00000372390 CLIC4Q9Y696 253 aa23.65■■□□□ 1.38
TSC22D3-205ENST00000372390 PIK3CDO00329 1044 aa23.64■■□□□ 1.38
TSC22D3-205ENST00000372390 NSMFQ6X4W1 530 aa23.64■■□□□ 1.38
TSC22D3-205ENST00000372390 SLC30A10Q6XR72 485 aa23.64■■□□□ 1.38
TSC22D3-205ENST00000372390 CHST13Q8NET6 341 aa23.64■■□□□ 1.38
TSC22D3-205ENST00000372390 MROH8Q9H579 483 aa23.64■■□□□ 1.38
TSC22D3-205ENST00000372390 FIBPO43427 364 aa23.63■■□□□ 1.37
TSC22D3-205ENST00000372390 EDIL3O43854 480 aa23.63■■□□□ 1.37
TSC22D3-205ENST00000372390 ERCC3P19447 782 aa23.63■■□□□ 1.37
TSC22D3-205ENST00000372390 MAPK4P31152 587 aa23.63■■□□□ 1.37
TSC22D3-205ENST00000372390 HSD17B4P51659 736 aa23.63■■□□□ 1.37
TSC22D3-205ENST00000372390 NONOQ15233 471 aaKnown RBP eCLIP23.63■■□□□ 1.37
TSC22D3-205ENST00000372390 TBCKQ8TEA7 893 aa23.63■■□□□ 1.37
TSC22D3-205ENST00000372390 ANO3Q9BYT9 981 aa23.63■■□□□ 1.37
TSC22D3-205ENST00000372390 ACAD9Q9H845 621 aa23.63■■□□□ 1.37
TSC22D3-205ENST00000372390 PCDHB6Q9Y5E3 794 aa23.63■■□□□ 1.37
TSC22D3-205ENST00000372390 LCTP09848 1927 aa23.63■■□□□ 1.37
TSC22D3-205ENST00000372390 WDR78Q5VTH9 848 aa23.63■■□□□ 1.37
TSC22D3-205ENST00000372390 ZNF396Q96N95 335 aaPredicted RBP23.63■■□□□ 1.37
TSC22D3-205ENST00000372390 PURBQ96QR8 312 aaKnown RBP23.63■■□□□ 1.37
TSC22D3-205ENST00000372390 RPS6P62753 249 aaKnown RBP23.62■■□□□ 1.37
TSC22D3-205ENST00000372390 KRT85P78386 507 aa23.62■■□□□ 1.37
TSC22D3-205ENST00000372390 GHRHRQ02643 423 aa23.62■■□□□ 1.37
TSC22D3-205ENST00000372390 MCF2L2Q86YR7 1114 aa23.62■■□□□ 1.37
TSC22D3-205ENST00000372390 GBP4Q96PP9 640 aa23.62■■□□□ 1.37
TSC22D3-205ENST00000372390 PORCNQ9H237 461 aa23.62■■□□□ 1.37
TSC22D3-205ENST00000372390 SP3Q02447 781 aa23.61■■□□□ 1.37
TSC22D3-205ENST00000372390 BAATQ14032 418 aaPredicted RBP23.61■■□□□ 1.37
TSC22D3-205ENST00000372390 RILPL1Q5EBL4 403 aa23.61■■□□□ 1.37
TSC22D3-205ENST00000372390 SYTL5Q8TDW5 730 aaPredicted RBP23.61■■□□□ 1.37
TSC22D3-205ENST00000372390 EFCC1Q9HA90 598 aa23.61■■□□□ 1.37
TSC22D3-205ENST00000372390 A1CFQ9NQ94 594 aaKnown RBP23.61■■□□□ 1.37
TSC22D3-205ENST00000372390 GPR25O00155 361 aa23.61■■□□□ 1.37
TSC22D3-205ENST00000372390 AP3B2Q13367 1082 aa23.61■■□□□ 1.37
TSC22D3-205ENST00000372390 KIF22Q14807 665 aa23.61■■□□□ 1.37
TSC22D3-205ENST00000372390 SF3A1Q15459 793 aaKnown RBP23.61■■□□□ 1.37
TSC22D3-205ENST00000372390 ANO1Q5XXA6 986 aa23.61■■□□□ 1.37
TSC22D3-205ENST00000372390 RNF207Q6ZRF8 634 aa23.61■■□□□ 1.37
TSC22D3-205ENST00000372390 NOL7Q9UMY1 257 aaKnown RBP23.61■■□□□ 1.37
TSC22D3-205ENST00000372390 IVNS1ABPQ9Y6Y0 642 aa23.61■■□□□ 1.37
TSC22D3-205ENST00000372390 SPDYE3A6NKU9 549 aa23.6■■□□□ 1.37
TSC22D3-205ENST00000372390 UBXN2AP68543 259 aa23.6■■□□□ 1.37
TSC22D3-205ENST00000372390 LACTBP83111 547 aaPredicted RBP23.6■■□□□ 1.37
TSC22D3-205ENST00000372390 ZNF174Q15697 407 aa23.6■■□□□ 1.37
TSC22D3-205ENST00000372390 TTC38Q5R3I4 469 aa23.6■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms