RNA–Protein interactions for RNA: ENST00000372317.7

CALCOCO2-202, Transcript of calcium binding and coiled-coil domain 2, humanhuman

TSL 3

Gene CALCOCO2, Length 462 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO2-202ENST00000372317 AP3B2Q13367 1082 aa13.17□□□□□ -0.3
CALCOCO2-202ENST00000372317 NBR1Q14596 966 aa13.17□□□□□ -0.3
CALCOCO2-202ENST00000372317 TAF1CQ15572 869 aaPredicted RBP13.17□□□□□ -0.3
CALCOCO2-202ENST00000372317 DEFB115Q30KQ5 88 aa13.17□□□□□ -0.3
CALCOCO2-202ENST00000372317 TKFCQ3LXA3 575 aa13.17□□□□□ -0.3
CALCOCO2-202ENST00000372317 SLC30A10Q6XR72 485 aa13.17□□□□□ -0.3
CALCOCO2-202ENST00000372317 RIOX2Q8IUF8 465 aa13.17□□□□□ -0.3
CALCOCO2-202ENST00000372317 MOV10L1Q9BXT6 1211 aaKnown RBP13.17□□□□□ -0.3
CALCOCO2-202ENST00000372317 ANO3Q9BYT9 981 aa13.17□□□□□ -0.3
CALCOCO2-202ENST00000372317 ACAD9Q9H845 621 aa13.17□□□□□ -0.3
CALCOCO2-202ENST00000372317 CNPY2Q9Y2B0 182 aa13.17□□□□□ -0.3
CALCOCO2-202ENST00000372317 WNT7AO00755 349 aa13.16□□□□□ -0.3
CALCOCO2-202ENST00000372317 FIBPO43427 364 aa13.16□□□□□ -0.3
CALCOCO2-202ENST00000372317 GCLCP48506 637 aaPredicted RBP13.16□□□□□ -0.3
CALCOCO2-202ENST00000372317 HSD17B4P51659 736 aa13.16□□□□□ -0.3
CALCOCO2-202ENST00000372317 KRT85P78386 507 aa13.16□□□□□ -0.3
CALCOCO2-202ENST00000372317 GHRHRQ02643 423 aa13.16□□□□□ -0.3
CALCOCO2-202ENST00000372317 NONOQ15233 471 aaKnown RBP eCLIP13.16□□□□□ -0.3
CALCOCO2-202ENST00000372317 INF2Q27J81 1249 aa13.16□□□□□ -0.3
CALCOCO2-202ENST00000372317 NSMFQ6X4W1 530 aa13.16□□□□□ -0.3
CALCOCO2-202ENST00000372317 NCAPG2Q86XI2 1143 aa13.16□□□□□ -0.3
CALCOCO2-202ENST00000372317 MCF2L2Q86YR7 1114 aa13.16□□□□□ -0.3
CALCOCO2-202ENST00000372317 ANKRD13CQ8N6S4 541 aa13.16□□□□□ -0.3
CALCOCO2-202ENST00000372317 TBC1D5Q92609 795 aa13.16□□□□□ -0.3
CALCOCO2-202ENST00000372317 ZNF396Q96N95 335 aaPredicted RBP13.16□□□□□ -0.3
CALCOCO2-202ENST00000372317 GBP4Q96PP9 640 aa13.16□□□□□ -0.3
CALCOCO2-202ENST00000372317 USP28Q96RU2 1077 aa13.16□□□□□ -0.3
CALCOCO2-202ENST00000372317 COL20A1Q9P218 1284 aa13.16□□□□□ -0.3
CALCOCO2-202ENST00000372317 MORF4L1Q9UBU8 362 aa13.16□□□□□ -0.3
CALCOCO2-202ENST00000372317 NOL7Q9UMY1 257 aaKnown RBP13.16□□□□□ -0.3
CALCOCO2-202ENST00000372317 SPDYE3A6NKU9 549 aa13.15□□□□□ -0.3
CALCOCO2-202ENST00000372317 ERCC3P19447 782 aa13.15□□□□□ -0.3
CALCOCO2-202ENST00000372317 ATP2B1P20020 1258 aa13.15□□□□□ -0.3
CALCOCO2-202ENST00000372317 COPB2P35606 906 aa13.15□□□□□ -0.3
CALCOCO2-202ENST00000372317 TOB1P50616 345 aaPredicted RBP13.15□□□□□ -0.3
CALCOCO2-202ENST00000372317 INHBEP58166 350 aa13.15□□□□□ -0.3
CALCOCO2-202ENST00000372317 FAM110CQ1W6H9 321 aa13.15□□□□□ -0.3
CALCOCO2-202ENST00000372317 RILPL1Q5EBL4 403 aa13.15□□□□□ -0.3
CALCOCO2-202ENST00000372317 TTC38Q5R3I4 469 aa13.15□□□□□ -0.3
CALCOCO2-202ENST00000372317 RNF207Q6ZRF8 634 aa13.15□□□□□ -0.3
CALCOCO2-202ENST00000372317 CLEC17AQ6ZS10 378 aa13.15□□□□□ -0.3
CALCOCO2-202ENST00000372317 FCHSD1Q86WN1 690 aa13.15□□□□□ -0.3
CALCOCO2-202ENST00000372317 TEX2Q8IWB9 1127 aa13.15□□□□□ -0.3
CALCOCO2-202ENST00000372317 CHST13Q8NET6 341 aa13.15□□□□□ -0.3
CALCOCO2-202ENST00000372317 SYTL5Q8TDW5 730 aaPredicted RBP13.15□□□□□ -0.3
CALCOCO2-202ENST00000372317 R3HDMLQ9H3Y0 253 aa13.15□□□□□ -0.3
CALCOCO2-202ENST00000372317 GDPD2Q9HCC8 539 aa13.15□□□□□ -0.3
CALCOCO2-202ENST00000372317 A1CFQ9NQ94 594 aaKnown RBP13.15□□□□□ -0.3
CALCOCO2-202ENST00000372317 SMCHD1A6NHR9 2005 aa13.14□□□□□ -0.31
CALCOCO2-202ENST00000372317 SLC25A27O95847 323 aa13.14□□□□□ -0.31
CALCOCO2-202ENST00000372317 TM4SF4P48230 202 aa13.14□□□□□ -0.31
CALCOCO2-202ENST00000372317 TRAPPC10P48553 1259 aa13.14□□□□□ -0.31
CALCOCO2-202ENST00000372317 RPS6P62753 249 aaKnown RBP13.14□□□□□ -0.31
CALCOCO2-202ENST00000372317 CEBPZQ03701 1054 aaKnown RBP13.14□□□□□ -0.31
CALCOCO2-202ENST00000372317 CRHR2Q13324 411 aa13.14□□□□□ -0.31
CALCOCO2-202ENST00000372317 SHCBP1Q8NEM2 672 aa13.14□□□□□ -0.31
CALCOCO2-202ENST00000372317 GPRC5AQ8NFJ5 357 aa13.14□□□□□ -0.31
CALCOCO2-202ENST00000372317 TBCKQ8TEA7 893 aa13.14□□□□□ -0.31
CALCOCO2-202ENST00000372317 PORCNQ9H237 461 aa13.14□□□□□ -0.31
CALCOCO2-202ENST00000372317 TFIP11Q9UBB9 837 aaKnown RBP13.14□□□□□ -0.31
CALCOCO2-202ENST00000372317 FBXO40Q9UH90 709 aa13.14□□□□□ -0.31
CALCOCO2-202ENST00000372317 CPA4Q9UI42 421 aa13.14□□□□□ -0.31
CALCOCO2-202ENST00000372317 CLIC4Q9Y696 253 aa13.14□□□□□ -0.31
CALCOCO2-202ENST00000372317 FOSP01100 380 aaPredicted RBP13.13□□□□□ -0.31
CALCOCO2-202ENST00000372317 BCRP11274 1271 aa13.13□□□□□ -0.31
CALCOCO2-202ENST00000372317 SREBF1P36956 1147 aa13.13□□□□□ -0.31
CALCOCO2-202ENST00000372317 NASPP49321 788 aaPredicted RBP13.13□□□□□ -0.31
CALCOCO2-202ENST00000372317 VEGFBP49765 207 aa13.13□□□□□ -0.31
CALCOCO2-202ENST00000372317 CCNA1P78396 465 aa13.13□□□□□ -0.31
CALCOCO2-202ENST00000372317 BAATQ14032 418 aaPredicted RBP13.13□□□□□ -0.31
CALCOCO2-202ENST00000372317 Q3C1V9 767 aa13.13□□□□□ -0.31
CALCOCO2-202ENST00000372317 WDR78Q5VTH9 848 aa13.13□□□□□ -0.31
CALCOCO2-202ENST00000372317 ANO1Q5XXA6 986 aa13.13□□□□□ -0.31
CALCOCO2-202ENST00000372317 ATL3Q6DD88 541 aa13.13□□□□□ -0.31
CALCOCO2-202ENST00000372317 MCTP2Q6DN12 878 aa13.13□□□□□ -0.31
CALCOCO2-202ENST00000372317 NEK8Q86SG6 692 aa13.13□□□□□ -0.31
CALCOCO2-202ENST00000372317 LEO1Q8WVC0 666 aaPredicted RBP13.13□□□□□ -0.31
CALCOCO2-202ENST00000372317 RNF39Q9H2S5 420 aa13.13□□□□□ -0.31
CALCOCO2-202ENST00000372317 EFCC1Q9HA90 598 aa13.13□□□□□ -0.31
CALCOCO2-202ENST00000372317 ZFYVE28Q9HCC9 887 aa13.13□□□□□ -0.31
CALCOCO2-202ENST00000372317 POLR3EQ9NVU0 708 aa13.13□□□□□ -0.31
CALCOCO2-202ENST00000372317 CYP39A1Q9NYL5 469 aa13.13□□□□□ -0.31
CALCOCO2-202ENST00000372317 PCDHB6Q9Y5E3 794 aa13.13□□□□□ -0.31
CALCOCO2-202ENST00000372317 PFASO15067 1338 aa13.13□□□□□ -0.31
CALCOCO2-202ENST00000372317 FRMPD4Q14CM0 1322 aa13.13□□□□□ -0.31
CALCOCO2-202ENST00000372317 RPTORQ8N122 1335 aa13.13□□□□□ -0.31
CALCOCO2-202ENST00000372317 TDP2O95551 362 aa13.12□□□□□ -0.31
CALCOCO2-202ENST00000372317 MCM7P33993 719 aa13.12□□□□□ -0.31
CALCOCO2-202ENST00000372317 UBXN2AP68543 259 aa13.12□□□□□ -0.31
CALCOCO2-202ENST00000372317 ARHGAP4P98171 946 aa13.12□□□□□ -0.31
CALCOCO2-202ENST00000372317 STK38Q15208 465 aa13.12□□□□□ -0.31
CALCOCO2-202ENST00000372317 SF3A1Q15459 793 aaKnown RBP13.12□□□□□ -0.31
CALCOCO2-202ENST00000372317 ZNF174Q15697 407 aa13.12□□□□□ -0.31
CALCOCO2-202ENST00000372317 LETM2Q2VYF4 491 aa13.12□□□□□ -0.31
CALCOCO2-202ENST00000372317 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.12□□□□□ -0.31
CALCOCO2-202ENST00000372317 ANKRD35Q8N283 1001 aa13.12□□□□□ -0.31
CALCOCO2-202ENST00000372317 PURBQ96QR8 312 aaKnown RBP13.12□□□□□ -0.31
CALCOCO2-202ENST00000372317 MROH8Q9H579 483 aa13.12□□□□□ -0.31
CALCOCO2-202ENST00000372317 EHMT1Q9H9B1 1298 aa13.12□□□□□ -0.31
CALCOCO2-202ENST00000372317 RTEL1Q9NZ71 1219 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 95.7 ms