RNA–Protein interactions for RNA: ENST00000372235.7

TMEM53-201, Transcript of transmembrane protein 53, humanhuman

TSL 2 BASIC

Gene TMEM53, Length 890 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-201ENST00000372235 UBA5Q9GZZ9 404 aa22.04■■□□□ 1.12
TMEM53-201ENST00000372235 MRPL11Q9Y3B7 192 aaKnown RBP22.04■■□□□ 1.12
TMEM53-201ENST00000372235 DYNC1LI2O43237 492 aaPredicted RBP22.03■■□□□ 1.12
TMEM53-201ENST00000372235 SMPD1P17405 629 aa22.03■■□□□ 1.12
TMEM53-201ENST00000372235 FBXO16Q8IX29 292 aaPredicted RBP22.03■■□□□ 1.12
TMEM53-201ENST00000372235 SAMD3Q8N6K7 520 aa22.03■■□□□ 1.12
TMEM53-201ENST00000372235 MCM3APO60318 1980 aa22.02■■□□□ 1.12
TMEM53-201ENST00000372235 C11orf97A0A1B0GVM6 126 aaPredicted RBP22.02■■□□□ 1.12
TMEM53-201ENST00000372235 MYADML2A6NDP7 307 aa22.02■■□□□ 1.12
TMEM53-201ENST00000372235 ADCY6O43306 1168 aa22.02■■□□□ 1.12
TMEM53-201ENST00000372235 CPT1AP50416 773 aa22.02■■□□□ 1.12
TMEM53-201ENST00000372235 CDK7P50613 346 aa22.02■■□□□ 1.12
TMEM53-201ENST00000372235 FAAP100Q0VG06 881 aa22.02■■□□□ 1.12
TMEM53-201ENST00000372235 USH1GQ495M9 461 aa22.02■■□□□ 1.12
TMEM53-201ENST00000372235 EEPD1Q7L9B9 569 aa22.02■■□□□ 1.12
TMEM53-201ENST00000372235 FBXO11Q86XK2 927 aa22.02■■□□□ 1.12
TMEM53-201ENST00000372235 WDR11Q9BZH6 1224 aa22.02■■□□□ 1.12
TMEM53-201ENST00000372235 MAP3K20Q9NYL2 800 aaKnown RBP22.02■■□□□ 1.12
TMEM53-201ENST00000372235 ASTN1O14525 1302 aa22.02■■□□□ 1.12
TMEM53-201ENST00000372235 LTBP2Q14767 1821 aa22.01■■□□□ 1.11
TMEM53-201ENST00000372235 RBM47A0AV96 593 aaKnown RBP22.01■■□□□ 1.11
TMEM53-201ENST00000372235 CYP21A2P08686 494 aa22.01■■□□□ 1.11
TMEM53-201ENST00000372235 FPGSQ05932 587 aa22.01■■□□□ 1.11
TMEM53-201ENST00000372235 SEC23AQ15436 765 aa22.01■■□□□ 1.11
TMEM53-201ENST00000372235 FAM109BQ6ICB4 259 aaPredicted RBP22.01■■□□□ 1.11
TMEM53-201ENST00000372235 SLC30A10Q6XR72 485 aa22.01■■□□□ 1.11
TMEM53-201ENST00000372235 SH3RF1Q7Z6J0 888 aa22.01■■□□□ 1.11
TMEM53-201ENST00000372235 SCFD2Q8WU76 684 aa22.01■■□□□ 1.11
TMEM53-201ENST00000372235 MTA3Q9BTC8 594 aa22.01■■□□□ 1.11
TMEM53-201ENST00000372235 AMNQ9BXJ7 453 aa22.01■■□□□ 1.11
TMEM53-201ENST00000372235 IL25Q9H293 177 aa22.01■■□□□ 1.11
TMEM53-201ENST00000372235 POLR3EQ9NVU0 708 aa22.01■■□□□ 1.11
TMEM53-201ENST00000372235 RANBP2P49792 3224 aaKnown RBP22.01■■□□□ 1.11
TMEM53-201ENST00000372235 IFIT3O14879 490 aaKnown RBP22■■□□□ 1.11
TMEM53-201ENST00000372235 CTAGE5O15320 804 aa22■■□□□ 1.11
TMEM53-201ENST00000372235 KPNA6O60684 536 aa22■■□□□ 1.11
TMEM53-201ENST00000372235 TIMP1P01033 207 aa22■■□□□ 1.11
TMEM53-201ENST00000372235 EDNRBP24530 442 aa22■■□□□ 1.11
TMEM53-201ENST00000372235 DEFB123Q8N688 67 aa22■■□□□ 1.11
TMEM53-201ENST00000372235 NSUN6Q8TEA1 469 aaKnown RBP22■■□□□ 1.11
TMEM53-201ENST00000372235 MAP4K1Q92918 833 aa22■■□□□ 1.11
TMEM53-201ENST00000372235 IWS1Q96ST2 819 aa22■■□□□ 1.11
TMEM53-201ENST00000372235 PDGFCQ9NRA1 345 aa22■■□□□ 1.11
TMEM53-201ENST00000372235 KLRF2D3W0D1 207 aa21.99■■□□□ 1.11
TMEM53-201ENST00000372235 PTH1RQ03431 593 aa21.99■■□□□ 1.11
TMEM53-201ENST00000372235 WTAPQ15007 396 aa21.99■■□□□ 1.11
TMEM53-201ENST00000372235 PPP2R5BQ15173 497 aa21.99■■□□□ 1.11
TMEM53-201ENST00000372235 QRICH1Q2TAL8 776 aa21.99■■□□□ 1.11
TMEM53-201ENST00000372235 JMJD4Q9H9V9 463 aa21.99■■□□□ 1.11
TMEM53-201ENST00000372235 GPHNQ9NQX3 736 aaPredicted RBP21.99■■□□□ 1.11
TMEM53-201ENST00000372235 E7EWF7 191 aa21.98■■□□□ 1.11
TMEM53-201ENST00000372235 BEX3Q00994 111 aa21.98■■□□□ 1.11
TMEM53-201ENST00000372235 ITGA7Q13683 1181 aa21.98■■□□□ 1.11
TMEM53-201ENST00000372235 TTLL4Q14679 1199 aa21.98■■□□□ 1.11
TMEM53-201ENST00000372235 CENPQQ7L2Z9 268 aaPredicted RBP21.98■■□□□ 1.11
TMEM53-201ENST00000372235 TMEM199Q8N511 208 aa21.98■■□□□ 1.11
TMEM53-201ENST00000372235 SLC43A3Q8NBI5 491 aa21.98■■□□□ 1.11
TMEM53-201ENST00000372235 TBX21Q9UL17 535 aa21.98■■□□□ 1.11
TMEM53-201ENST00000372235 PALM3A6NDB9 673 aaPredicted RBP21.97■■□□□ 1.11
TMEM53-201ENST00000372235 ZBTB5O15062 677 aa21.97■■□□□ 1.11
TMEM53-201ENST00000372235 PPIGQ13427 754 aaKnown RBP eCLIP21.97■■□□□ 1.11
TMEM53-201ENST00000372235 SHHQ15465 462 aa21.97■■□□□ 1.11
TMEM53-201ENST00000372235 MFSD5Q6N075 450 aa21.97■■□□□ 1.11
TMEM53-201ENST00000372235 CXCL17Q6UXB2 119 aa21.97■■□□□ 1.11
TMEM53-201ENST00000372235 CYB5R4Q7L1T6 521 aa21.97■■□□□ 1.11
TMEM53-201ENST00000372235 CATIPQ7Z7H3 387 aa21.97■■□□□ 1.11
TMEM53-201ENST00000372235 FAM126BQ8IXS8 530 aa21.97■■□□□ 1.11
TMEM53-201ENST00000372235 TMTC2Q8N394 836 aa21.97■■□□□ 1.11
TMEM53-201ENST00000372235 PURBQ96QR8 312 aaKnown RBP21.97■■□□□ 1.11
TMEM53-201ENST00000372235 VAT1LQ9HCJ6 419 aa21.97■■□□□ 1.11
TMEM53-201ENST00000372235 LRRC37A2A6NM11 1700 aa21.97■■□□□ 1.11
TMEM53-201ENST00000372235 SUPT20HL2P0C7V6 817 aa21.96■■□□□ 1.11
TMEM53-201ENST00000372235 SMAD3P84022 425 aaKnown RBP21.96■■□□□ 1.11
TMEM53-201ENST00000372235 STXBP2Q15833 593 aa21.96■■□□□ 1.11
TMEM53-201ENST00000372235 OR6J1Q8NGC5 347 aa21.96■■□□□ 1.11
TMEM53-201ENST00000372235 MAP3K14Q99558 947 aa21.96■■□□□ 1.11
TMEM53-201ENST00000372235 CPVLQ9H3G5 476 aa21.96■■□□□ 1.11
TMEM53-201ENST00000372235 MAD2L2Q9UI95 211 aa21.96■■□□□ 1.11
TMEM53-201ENST00000372235 DNAH12Q6ZR08 3092 aa21.95■■□□□ 1.11
TMEM53-201ENST00000372235 GRM4Q14833 912 aa21.95■■□□□ 1.1
TMEM53-201ENST00000372235 ARHGEF16Q5VV41 709 aa21.95■■□□□ 1.1
TMEM53-201ENST00000372235 CASC1Q6TDU7 716 aa21.95■■□□□ 1.1
TMEM53-201ENST00000372235 MTMR8Q96EF0 704 aa21.95■■□□□ 1.1
TMEM53-201ENST00000372235 RNPC3Q96LT9 517 aaKnown RBP21.95■■□□□ 1.1
TMEM53-201ENST00000372235 RMDN3Q96TC7 470 aa21.95■■□□□ 1.1
TMEM53-201ENST00000372235 CD4P01730 458 aa21.94■■□□□ 1.1
TMEM53-201ENST00000372235 TXNP10599 105 aaKnown RBP21.94■■□□□ 1.1
TMEM53-201ENST00000372235 IRX5P78411 483 aaPredicted RBP21.94■■□□□ 1.1
TMEM53-201ENST00000372235 GHRHRQ02643 423 aa21.94■■□□□ 1.1
TMEM53-201ENST00000372235 TMEM67Q5HYA8 995 aa21.94■■□□□ 1.1
TMEM53-201ENST00000372235 ZNF697Q5TEC3 545 aa21.94■■□□□ 1.1
TMEM53-201ENST00000372235 SYTL5Q8TDW5 730 aaPredicted RBP21.94■■□□□ 1.1
TMEM53-201ENST00000372235 MTG1Q9BT17 334 aaPredicted RBP21.94■■□□□ 1.1
TMEM53-201ENST00000372235 PCDHA1Q9Y5I3 950 aa21.94■■□□□ 1.1
TMEM53-201ENST00000372235 RBM8AQ9Y5S9 174 aaKnown RBP21.94■■□□□ 1.1
TMEM53-201ENST00000372235 LCTP09848 1927 aa21.94■■□□□ 1.1
TMEM53-201ENST00000372235 EIF3JO75822 258 aaKnown RBP21.93■■□□□ 1.1
TMEM53-201ENST00000372235 ITGB8P26012 769 aa21.93■■□□□ 1.1
TMEM53-201ENST00000372235 KIF5BP33176 963 aa21.93■■□□□ 1.1
TMEM53-201ENST00000372235 BMP2KLQ5H9B9 411 aa21.93■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms