RNA–Protein interactions for RNA: ENST00000360001.10

SDF4-202, Transcript of stromal cell derived factor 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SDF4, Length 1,956 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-202ENST00000360001 SYKP43405 635 aa26.34■■□□□ 1.81
SDF4-202ENST00000360001 LDLRAD1Q5T700 205 aa26.34■■□□□ 1.81
SDF4-202ENST00000360001 USP49Q70CQ1 688 aa26.34■■□□□ 1.81
SDF4-202ENST00000360001 WNK4Q96J92 1243 aa26.34■■□□□ 1.81
SDF4-202ENST00000360001 KCNH3Q9ULD8 1083 aa26.34■■□□□ 1.81
SDF4-202ENST00000360001 FOSP01100 380 aaPredicted RBP26.33■■□□□ 1.81
SDF4-202ENST00000360001 HOXA13P31271 388 aaPredicted RBP26.33■■□□□ 1.81
SDF4-202ENST00000360001 TBC1D5Q92609 795 aa26.33■■□□□ 1.81
SDF4-202ENST00000360001 RAVER2Q9HCJ3 691 aaKnown RBP26.33■■□□□ 1.81
SDF4-202ENST00000360001 FAM13BQ9NYF5 915 aa26.33■■□□□ 1.81
SDF4-202ENST00000360001 LOC285556D6RIA3 1793 aa26.33■■□□□ 1.81
SDF4-202ENST00000360001 ZBED4O75132 1171 aa26.33■■□□□ 1.8
SDF4-202ENST00000360001 TDP2O95551 362 aa26.33■■□□□ 1.8
SDF4-202ENST00000360001 DSG3P32926 999 aa26.33■■□□□ 1.8
SDF4-202ENST00000360001 PPP4R3AQ6IN85 833 aa26.33■■□□□ 1.8
SDF4-202ENST00000360001 ADAMTS5Q9UNA0 930 aa26.33■■□□□ 1.8
SDF4-202ENST00000360001 GOLGA6L3A6NEY3 463 aa26.32■■□□□ 1.8
SDF4-202ENST00000360001 PRPHP41219 470 aa26.32■■□□□ 1.8
SDF4-202ENST00000360001 COG2Q14746 738 aa26.32■■□□□ 1.8
SDF4-202ENST00000360001 CPXCR1Q8N123 301 aa26.32■■□□□ 1.8
SDF4-202ENST00000360001 CRYGNQ8WXF5 182 aa26.32■■□□□ 1.8
SDF4-202ENST00000360001 A0A0G2JLL6 359 aaPredicted RBP26.31■■□□□ 1.8
SDF4-202ENST00000360001 CFBP00751 764 aa26.31■■□□□ 1.8
SDF4-202ENST00000360001 PRRT2Q7Z6L0 340 aaPredicted RBP26.31■■□□□ 1.8
SDF4-202ENST00000360001 POTEDQ86YR6 584 aa26.31■■□□□ 1.8
SDF4-202ENST00000360001 CKAP2LQ8IYA6 745 aa26.31■■□□□ 1.8
SDF4-202ENST00000360001 REPS2Q8NFH8 660 aa26.31■■□□□ 1.8
SDF4-202ENST00000360001 NMRK2Q9NPI5 230 aa26.31■■□□□ 1.8
SDF4-202ENST00000360001 COL11A1P12107 1806 aaPredicted RBP26.31■■□□□ 1.8
SDF4-202ENST00000360001 SPDYE3A6NKU9 549 aa26.31■■□□□ 1.8
SDF4-202ENST00000360001 GCOM1H8Y6P7 765 aaPredicted RBP26.31■■□□□ 1.8
SDF4-202ENST00000360001 CXCL11O14625 94 aa26.31■■□□□ 1.8
SDF4-202ENST00000360001 CTAGE5O15320 804 aa26.31■■□□□ 1.8
SDF4-202ENST00000360001 SLC37A4O43826 429 aa26.31■■□□□ 1.8
SDF4-202ENST00000360001 OR52Z1P0C646 297 aa26.31■■□□□ 1.8
SDF4-202ENST00000360001 POLR2MP0CAP2 368 aa26.31■■□□□ 1.8
SDF4-202ENST00000360001 PPIL2Q13356 520 aa26.31■■□□□ 1.8
SDF4-202ENST00000360001 EPSTI1Q96J88 318 aa26.31■■□□□ 1.8
SDF4-202ENST00000360001 FUCA2Q9BTY2 467 aa26.31■■□□□ 1.8
SDF4-202ENST00000360001 ZNF408Q9H9D4 720 aa26.31■■□□□ 1.8
SDF4-202ENST00000360001 KCNH4Q9UQ05 1017 aa26.31■■□□□ 1.8
SDF4-202ENST00000360001 USP11P51784 963 aa26.3■■□□□ 1.8
SDF4-202ENST00000360001 TREML2Q5T2D2 321 aa26.3■■□□□ 1.8
SDF4-202ENST00000360001 DTHD1Q6ZMT9 781 aa26.3■■□□□ 1.8
SDF4-202ENST00000360001 CLEC4DQ8WXI8 215 aa26.3■■□□□ 1.8
SDF4-202ENST00000360001 SYMPKQ92797 1274 aaKnown RBP26.3■■□□□ 1.8
SDF4-202ENST00000360001 TIGD1Q96MW7 591 aa26.3■■□□□ 1.8
SDF4-202ENST00000360001 DCAF8L1A6NGE4 600 aa26.29■■□□□ 1.8
SDF4-202ENST00000360001 LONP1P36776 959 aaKnown RBP26.29■■□□□ 1.8
SDF4-202ENST00000360001 SREBF1P36956 1147 aa26.29■■□□□ 1.8
SDF4-202ENST00000360001 OPTNQ96CV9 577 aa26.29■■□□□ 1.8
SDF4-202ENST00000360001 PNMA2Q9UL42 364 aa26.29■■□□□ 1.8
SDF4-202ENST00000360001 CTDP1Q9Y5B0 961 aaPredicted RBP26.29■■□□□ 1.8
SDF4-202ENST00000360001 MYPNQ86TC9 1320 aa26.29■■□□□ 1.8
SDF4-202ENST00000360001 ALAS1P13196 640 aa26.29■■□□□ 1.8
SDF4-202ENST00000360001 GCFC2P16383 781 aaKnown RBP26.29■■□□□ 1.8
SDF4-202ENST00000360001 ARHGAP4P98171 946 aa26.29■■□□□ 1.8
SDF4-202ENST00000360001 PROCA1Q8NCQ7 364 aaPredicted RBP26.29■■□□□ 1.8
SDF4-202ENST00000360001 MTMR9Q96QG7 549 aa26.29■■□□□ 1.8
SDF4-202ENST00000360001 NAP1L4Q99733 375 aaKnown RBP26.29■■□□□ 1.8
SDF4-202ENST00000360001 FCHSD1Q86WN1 690 aa26.28■■□□□ 1.8
SDF4-202ENST00000360001 SDF4Q9BRK5 362 aa26.28■■□□□ 1.8
SDF4-202ENST00000360001 TSPY26PQ9H489 355 aa26.28■■□□□ 1.8
SDF4-202ENST00000360001 UNCXA6NJT0 531 aa26.27■■□□□ 1.8
SDF4-202ENST00000360001 SPDYE16A6NNV3 312 aaPredicted RBP26.27■■□□□ 1.8
SDF4-202ENST00000360001 NFIBO00712 420 aa26.27■■□□□ 1.8
SDF4-202ENST00000360001 HSD17B4P51659 736 aa26.27■■□□□ 1.8
SDF4-202ENST00000360001 LONRF3Q496Y0 759 aa26.27■■□□□ 1.8
SDF4-202ENST00000360001 HOXC10Q9NYD6 342 aa26.27■■□□□ 1.8
SDF4-202ENST00000360001 DDX25Q9UHL0 483 aaKnown RBP26.27■■□□□ 1.8
SDF4-202ENST00000360001 CYP3A7-CYP3A51PA0A087WV96 503 aa26.27■■□□□ 1.8
SDF4-202ENST00000360001 POLR2DO15514 142 aaKnown RBP26.27■■□□□ 1.8
SDF4-202ENST00000360001 CYP3A7P24462 503 aa26.27■■□□□ 1.8
SDF4-202ENST00000360001 OAZ1P54368 228 aa26.27■■□□□ 1.8
SDF4-202ENST00000360001 GHRHRQ02643 423 aa26.27■■□□□ 1.8
SDF4-202ENST00000360001 CALCRLQ16602 461 aa26.27■■□□□ 1.8
SDF4-202ENST00000360001 GADL1Q6ZQY3 521 aa26.27■■□□□ 1.8
SDF4-202ENST00000360001 MBOAT7Q96N66 472 aa26.27■■□□□ 1.8
SDF4-202ENST00000360001 ZNF214Q9UL59 606 aaPredicted RBP26.27■■□□□ 1.8
SDF4-202ENST00000360001 A0A087X0B3 334 aa26.26■■□□□ 1.79
SDF4-202ENST00000360001 MUM1L1Q5H9M0 696 aa26.26■■□□□ 1.79
SDF4-202ENST00000360001 MOXD1Q6UVY6 613 aa26.26■■□□□ 1.79
SDF4-202ENST00000360001 ZNF526Q8TF50 670 aaPredicted RBP26.26■■□□□ 1.79
SDF4-202ENST00000360001 PANK2Q9BZ23 570 aa26.26■■□□□ 1.79
SDF4-202ENST00000360001 RBBP6Q7Z6E9 1792 aaKnown RBP26.26■■□□□ 1.79
SDF4-202ENST00000360001 GJA5P36382 358 aa26.26■■□□□ 1.79
SDF4-202ENST00000360001 KRBA2Q6ZNG9 492 aa26.26■■□□□ 1.79
SDF4-202ENST00000360001 HOMER2Q9NSB8 354 aa26.26■■□□□ 1.79
SDF4-202ENST00000360001 ATP2A1O14983 1001 aa26.25■■□□□ 1.79
SDF4-202ENST00000360001 HOXA7P31268 230 aaPredicted RBP26.25■■□□□ 1.79
SDF4-202ENST00000360001 TMEM132BQ14DG7 1078 aa26.25■■□□□ 1.79
SDF4-202ENST00000360001 MCF2L2Q86YR7 1114 aa26.25■■□□□ 1.79
SDF4-202ENST00000360001 PDILTQ8N807 584 aa26.25■■□□□ 1.79
SDF4-202ENST00000360001 FKBP1BP68106 108 aa26.24■■□□□ 1.79
SDF4-202ENST00000360001 MOGSQ13724 837 aa26.24■■□□□ 1.79
SDF4-202ENST00000360001 SLC10A4Q96EP9 437 aa26.24■■□□□ 1.79
SDF4-202ENST00000360001 RBSNQ9H1K0 784 aa26.24■■□□□ 1.79
SDF4-202ENST00000360001 RIPK3Q9Y572 518 aa26.24■■□□□ 1.79
SDF4-202ENST00000360001 CYP3A4P08684 503 aa26.24■■□□□ 1.79
SDF4-202ENST00000360001 CNNM3Q8NE01 707 aa26.24■■□□□ 1.79
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms