RNA–Protein interactions for RNA: ENST00000357179.9

TOP3B-201, Transcript of DNA topoisomerase III beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TOP3B, Length 2,863 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3B-201ENST00000357179 FAM205CA6NFA0 338 aa16.27■□□□□ 0.2
TOP3B-201ENST00000357179 CALM1P0DP23 149 aa16.27■□□□□ 0.2
TOP3B-201ENST00000357179 CALM2P0DP24 149 aa16.27■□□□□ 0.2
TOP3B-201ENST00000357179 CALM3P0DP25 149 aa16.27■□□□□ 0.2
TOP3B-201ENST00000357179 EARS2Q5JPH6 523 aaKnown RBP16.27■□□□□ 0.2
TOP3B-201ENST00000357179 PPP4R3AQ6IN85 833 aa16.27■□□□□ 0.2
TOP3B-201ENST00000357179 HAUS2Q9NVX0 235 aa16.27■□□□□ 0.2
TOP3B-201ENST00000357179 DUSP10Q9Y6W6 482 aa16.27■□□□□ 0.2
TOP3B-201ENST00000357179 NUP98P52948 1817 aa16.27■□□□□ 0.19
TOP3B-201ENST00000357179 STRCP1A6NGW2 1772 aa16.27■□□□□ 0.19
TOP3B-201ENST00000357179 XDHP47989 1333 aa16.27■□□□□ 0.19
TOP3B-201ENST00000357179 A0A1W2PQC6 194 aa16.27■□□□□ 0.19
TOP3B-201ENST00000357179 FRMD3A2A2Y4 597 aa16.27■□□□□ 0.19
TOP3B-201ENST00000357179 E7EVH7 732 aa16.27■□□□□ 0.19
TOP3B-201ENST00000357179 GTPBP6O43824 516 aaPredicted RBP16.27■□□□□ 0.19
TOP3B-201ENST00000357179 CYP19A1P11511 503 aaPredicted RBP16.27■□□□□ 0.19
TOP3B-201ENST00000357179 TRAPPC10P48553 1259 aa16.27■□□□□ 0.19
TOP3B-201ENST00000357179 MRPS25P82663 173 aaKnown RBP16.27■□□□□ 0.19
TOP3B-201ENST00000357179 E2F5Q15329 346 aa16.27■□□□□ 0.19
TOP3B-201ENST00000357179 SPRED3Q2MJR0 410 aa16.27■□□□□ 0.19
TOP3B-201ENST00000357179 ANKRD20A8PQ5CZ79 823 aa16.27■□□□□ 0.19
TOP3B-201ENST00000357179 TTC38Q5R3I4 469 aa16.27■□□□□ 0.19
TOP3B-201ENST00000357179 ZNF34Q8IZ26 560 aa16.27■□□□□ 0.19
TOP3B-201ENST00000357179 ZNF483Q8TF39 744 aaPredicted RBP16.27■□□□□ 0.19
TOP3B-201ENST00000357179 CCDC43Q96MW1 224 aaKnown RBP16.27■□□□□ 0.19
TOP3B-201ENST00000357179 VAV2P52735 878 aa16.26■□□□□ 0.19
TOP3B-201ENST00000357179 PAK1Q13153 545 aa16.26■□□□□ 0.19
TOP3B-201ENST00000357179 ITGB3BPQ13352 177 aaPredicted RBP16.26■□□□□ 0.19
TOP3B-201ENST00000357179 XRCC4Q13426 336 aa16.26■□□□□ 0.19
TOP3B-201ENST00000357179 NAA25Q14CX7 972 aa16.26■□□□□ 0.19
TOP3B-201ENST00000357179 GLE1Q53GS7 698 aaKnown RBP16.26■□□□□ 0.19
TOP3B-201ENST00000357179 ATP6V1G3Q96LB4 118 aa16.26■□□□□ 0.19
TOP3B-201ENST00000357179 RMND1Q9NWS8 449 aa16.26■□□□□ 0.19
TOP3B-201ENST00000357179 SSBP05455 408 aaKnown RBP eCLIP16.26■□□□□ 0.19
TOP3B-201ENST00000357179 PCP11498 1178 aaKnown RBP16.26■□□□□ 0.19
TOP3B-201ENST00000357179 MREGQ8N565 214 aa16.26■□□□□ 0.19
TOP3B-201ENST00000357179 MB21D1Q8N884 522 aa16.26■□□□□ 0.19
TOP3B-201ENST00000357179 ARMC2Q8NEN0 867 aa16.26■□□□□ 0.19
TOP3B-201ENST00000357179 TRIM58Q8NG06 486 aa16.26■□□□□ 0.19
TOP3B-201ENST00000357179 PIK3R5Q8WYR1 880 aa16.26■□□□□ 0.19
TOP3B-201ENST00000357179 NHSL1Q5SYE7 1610 aa16.26■□□□□ 0.19
TOP3B-201ENST00000357179 MACROD2A1Z1Q3 448 aa16.25■□□□□ 0.19
TOP3B-201ENST00000357179 HMGB1P1B2RPK0 211 aaPredicted RBP16.25■□□□□ 0.19
TOP3B-201ENST00000357179 MGRN1O60291 552 aa16.25■□□□□ 0.19
TOP3B-201ENST00000357179 ZNF658Q5TYW1 1059 aaPredicted RBP16.25■□□□□ 0.19
TOP3B-201ENST00000357179 RRAGBQ5VZM2 374 aa16.25■□□□□ 0.19
TOP3B-201ENST00000357179 PDXDC2PQ6P474 469 aa16.25■□□□□ 0.19
TOP3B-201ENST00000357179 CATIPQ7Z7H3 387 aa16.25■□□□□ 0.19
TOP3B-201ENST00000357179 TAX1BP1Q86VP1 789 aa16.25■□□□□ 0.19
TOP3B-201ENST00000357179 CCDC170Q8IYT3 715 aa16.25■□□□□ 0.19
TOP3B-201ENST00000357179 ZSCAN10Q96SZ4 725 aaPredicted RBP16.25■□□□□ 0.19
TOP3B-201ENST00000357179 IPO7O95373 1038 aaKnown RBP16.25■□□□□ 0.19
TOP3B-201ENST00000357179 GBP2P32456 591 aaPredicted RBP16.25■□□□□ 0.19
TOP3B-201ENST00000357179 NPY5RQ15761 445 aa16.25■□□□□ 0.19
TOP3B-201ENST00000357179 KIRREL3Q8IZU9 778 aa16.25■□□□□ 0.19
TOP3B-201ENST00000357179 ENAHQ8N8S7 591 aaPredicted RBP16.25■□□□□ 0.19
TOP3B-201ENST00000357179 HOOK2Q96ED9 719 aa16.25■□□□□ 0.19
TOP3B-201ENST00000357179 ANKRD33BA6NCL7 494 aa16.24■□□□□ 0.19
TOP3B-201ENST00000357179 DDAH1O94760 285 aa16.24■□□□□ 0.19
TOP3B-201ENST00000357179 MATR3P43243 847 aaKnown RBP eCLIP16.24■□□□□ 0.199e-6■■□□□ 12
TOP3B-201ENST00000357179 ICA1Q05084 483 aa16.24■□□□□ 0.19
TOP3B-201ENST00000357179 KIF5AQ12840 1032 aa16.24■□□□□ 0.19
TOP3B-201ENST00000357179 LACTB2Q53H82 288 aaPredicted RBP16.24■□□□□ 0.19
TOP3B-201ENST00000357179 RASSF8Q8NHQ8 419 aa16.24■□□□□ 0.19
TOP3B-201ENST00000357179 TSGA10Q9BZW7 698 aa16.24■□□□□ 0.19
TOP3B-201ENST00000357179 DUOX1Q9NRD9 1551 aa16.24■□□□□ 0.19
TOP3B-201ENST00000357179 LGALS16A8MUM7 142 aa16.24■□□□□ 0.19
TOP3B-201ENST00000357179 PTGDRQ13258 359 aa16.24■□□□□ 0.19
TOP3B-201ENST00000357179 ZNF174Q15697 407 aa16.24■□□□□ 0.19
TOP3B-201ENST00000357179 NBPF9Q3BBW0 867 aa16.24■□□□□ 0.19
TOP3B-201ENST00000357179 GRIPAP1Q4V328 841 aa16.24■□□□□ 0.19
TOP3B-201ENST00000357179 C8orf74Q6P047 294 aa16.24■□□□□ 0.19
TOP3B-201ENST00000357179 ZNF507Q8TCN5 953 aa16.24■□□□□ 0.19
TOP3B-201ENST00000357179 OSBPL9Q96SU4 736 aa16.24■□□□□ 0.19
TOP3B-201ENST00000357179 NHEJ1Q9H9Q4 299 aaPredicted RBP16.24■□□□□ 0.19
TOP3B-201ENST00000357179 BATF3Q9NR55 127 aa16.24■□□□□ 0.19
TOP3B-201ENST00000357179 LRP2BPQ9P2M1 347 aa16.24■□□□□ 0.19
TOP3B-201ENST00000357179 V9GY48 417 aaPredicted RBP16.24■□□□□ 0.19
TOP3B-201ENST00000357179 DLEC1Q9Y238 1755 aa16.24■□□□□ 0.19
TOP3B-201ENST00000357179 FGRP09769 529 aa16.24■□□□□ 0.19
TOP3B-201ENST00000357179 TCP1P17987 556 aaKnown RBP16.24■□□□□ 0.19
TOP3B-201ENST00000357179 IL6STP40189 918 aaPredicted RBP16.24■□□□□ 0.19
TOP3B-201ENST00000357179 SCTRP47872 440 aa16.24■□□□□ 0.19
TOP3B-201ENST00000357179 NELFBQ8WX92 580 aa16.24■□□□□ 0.19
TOP3B-201ENST00000357179 RSRC1Q96IZ7 334 aaKnown RBP16.24■□□□□ 0.19
TOP3B-201ENST00000357179 GDF3Q9NR23 364 aa16.24■□□□□ 0.19
TOP3B-201ENST00000357179 MYH2Q9UKX2 1941 aa16.23■□□□□ 0.19
TOP3B-201ENST00000357179 H7C1D1 291 aa16.23■□□□□ 0.19
TOP3B-201ENST00000357179 WNT7AO00755 349 aa16.23■□□□□ 0.19
TOP3B-201ENST00000357179 SEMA3FQ13275 785 aa16.23■□□□□ 0.19
TOP3B-201ENST00000357179 IFIT1BQ5T764 474 aaKnown RBP16.23■□□□□ 0.19
TOP3B-201ENST00000357179 TMTC3Q6ZXV5 915 aa16.23■□□□□ 0.19
TOP3B-201ENST00000357179 IRF2BP1Q8IU81 584 aa16.23■□□□□ 0.19
TOP3B-201ENST00000357179 IFT20Q8IY31 132 aa16.23■□□□□ 0.19
TOP3B-201ENST00000357179 MIGA1Q8NAN2 632 aa16.23■□□□□ 0.19
TOP3B-201ENST00000357179 ZBTB1Q9Y2K1 713 aa16.23■□□□□ 0.19
TOP3B-201ENST00000357179 GMNCA6NCL1 334 aa16.23■□□□□ 0.19
TOP3B-201ENST00000357179 PPP1R12BO60237 982 aaPredicted RBP16.23■□□□□ 0.19
TOP3B-201ENST00000357179 TACC1O75410 805 aa16.23■□□□□ 0.19
TOP3B-201ENST00000357179 RPSAP08865 295 aaKnown RBP16.23■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms