RNA–Protein interactions for RNA: ENST00000340477.9

SYNE4-202, Transcript of spectrin repeat containing nuclear envelope family member 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SYNE4, Length 1,004 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE4-202ENST00000340477 PIBF1Q8WXW3 757 aa22.22■■□□□ 1.15
SYNE4-202ENST00000340477 FGD4Q96M96 766 aa22.22■■□□□ 1.15
SYNE4-202ENST00000340477 FAM184BQ9ULE4 1060 aa22.22■■□□□ 1.15
SYNE4-202ENST00000340477 LRRC37A2A6NM11 1700 aa22.22■■□□□ 1.15
SYNE4-202ENST00000340477 CYTH3O43739 400 aa22.21■■□□□ 1.15
SYNE4-202ENST00000340477 PLEKHA8P1O95397 391 aa22.21■■□□□ 1.15
SYNE4-202ENST00000340477 SNAI1O95863 264 aaPredicted RBP22.21■■□□□ 1.15
SYNE4-202ENST00000340477 CPA1P15085 419 aa22.21■■□□□ 1.15
SYNE4-202ENST00000340477 ALDH5A1P51649 535 aaPredicted RBP22.21■■□□□ 1.15
SYNE4-202ENST00000340477 TMTC3Q6ZXV5 915 aa22.21■■□□□ 1.15
SYNE4-202ENST00000340477 RUFY3Q7L099 469 aa22.21■■□□□ 1.15
SYNE4-202ENST00000340477 DNERQ8NFT8 737 aa22.21■■□□□ 1.15
SYNE4-202ENST00000340477 BRF1Q92994 677 aa22.21■■□□□ 1.15
SYNE4-202ENST00000340477 TM6SF1Q9BZW5 370 aa22.21■■□□□ 1.15
SYNE4-202ENST00000340477 CCDC196A0A1B0GTZ2 297 aa22.2■■□□□ 1.14
SYNE4-202ENST00000340477 CFBP00751 764 aa22.2■■□□□ 1.14
SYNE4-202ENST00000340477 MYCNP04198 464 aaPredicted RBP22.2■■□□□ 1.14
SYNE4-202ENST00000340477 ZNF865P0CJ78 1059 aaPredicted RBP22.2■■□□□ 1.14
SYNE4-202ENST00000340477 PPP2R5BQ15173 497 aa22.2■■□□□ 1.14
SYNE4-202ENST00000340477 ANO1Q5XXA6 986 aa22.2■■□□□ 1.14
SYNE4-202ENST00000340477 SAMD3Q8N6K7 520 aa22.2■■□□□ 1.14
SYNE4-202ENST00000340477 PAWRQ96IZ0 340 aaKnown RBP22.2■■□□□ 1.14
SYNE4-202ENST00000340477 XPNPEP3Q9NQH7 507 aa22.2■■□□□ 1.14
SYNE4-202ENST00000340477 KBTBD13C9JR72 458 aa22.19■■□□□ 1.14
SYNE4-202ENST00000340477 METAP2P50579 478 aaKnown RBP eCLIP22.19■■□□□ 1.14
SYNE4-202ENST00000340477 ANAPC15P60006 121 aa22.19■■□□□ 1.14
SYNE4-202ENST00000340477 PDE4DQ08499 809 aa22.19■■□□□ 1.14
SYNE4-202ENST00000340477 SRBD1Q8N5C6 995 aaKnown RBP22.19■■□□□ 1.14
SYNE4-202ENST00000340477 C11orf49Q9H6J7 331 aa22.19■■□□□ 1.14
SYNE4-202ENST00000340477 ZSWIM6Q9HCJ5 1215 aa22.19■■□□□ 1.14
SYNE4-202ENST00000340477 VTA1Q9NP79 307 aa22.19■■□□□ 1.14
SYNE4-202ENST00000340477 MAP3K20Q9NYL2 800 aaKnown RBP22.19■■□□□ 1.14
SYNE4-202ENST00000340477 BRPF3Q9ULD4 1205 aa22.19■■□□□ 1.14
SYNE4-202ENST00000340477 PDE4DIPQ5VU43 2346 aa22.19■■□□□ 1.14
SYNE4-202ENST00000340477 DNM1LO00429 736 aa22.18■■□□□ 1.14
SYNE4-202ENST00000340477 PPP1R11O60927 126 aaPredicted RBP22.18■■□□□ 1.14
SYNE4-202ENST00000340477 APOBRQ0VD83 1088 aa22.18■■□□□ 1.14
SYNE4-202ENST00000340477 SLC35G1Q2M3R5 365 aa22.18■■□□□ 1.14
SYNE4-202ENST00000340477 UBE2Q1Q7Z7E8 422 aa22.18■■□□□ 1.14
SYNE4-202ENST00000340477 FBXL16Q8N461 479 aa22.18■■□□□ 1.14
SYNE4-202ENST00000340477 SPC25Q9HBM1 224 aa22.18■■□□□ 1.14
SYNE4-202ENST00000340477 CCDC144BQ3MJ40 725 aa22.17■■□□□ 1.14
SYNE4-202ENST00000340477 NOL8Q76FK4 1167 aaKnown RBP22.17■■□□□ 1.14
SYNE4-202ENST00000340477 RNF180Q86T96 592 aa22.17■■□□□ 1.14
SYNE4-202ENST00000340477 CMTR1Q8N1G2 835 aaKnown RBP22.17■■□□□ 1.14
SYNE4-202ENST00000340477 CCDC82Q8N4S0 544 aa22.17■■□□□ 1.14
SYNE4-202ENST00000340477 NSUN6Q8TEA1 469 aaKnown RBP22.17■■□□□ 1.14
SYNE4-202ENST00000340477 DIS3LQ8TF46 1054 aaKnown RBP22.17■■□□□ 1.14
SYNE4-202ENST00000340477 PURBQ96QR8 312 aaKnown RBP22.17■■□□□ 1.14
SYNE4-202ENST00000340477 ASTN1O14525 1302 aa22.16■■□□□ 1.14
SYNE4-202ENST00000340477 GCOM1H8Y6P7 765 aaPredicted RBP22.16■■□□□ 1.14
SYNE4-202ENST00000340477 POLR2MP0CAP2 368 aa22.16■■□□□ 1.14
SYNE4-202ENST00000340477 FBXO16Q8IX29 292 aaPredicted RBP22.16■■□□□ 1.14
SYNE4-202ENST00000340477 SYTL5Q8TDW5 730 aaPredicted RBP22.16■■□□□ 1.14
SYNE4-202ENST00000340477 MORC4Q8TE76 937 aa22.16■■□□□ 1.14
SYNE4-202ENST00000340477 DPF3Q92784 378 aa22.16■■□□□ 1.14
SYNE4-202ENST00000340477 CUL5Q93034 780 aa22.16■■□□□ 1.14
SYNE4-202ENST00000340477 DUSP11O75319 330 aaKnown RBP22.15■■□□□ 1.14
SYNE4-202ENST00000340477 HSD17B4P51659 736 aa22.15■■□□□ 1.14
SYNE4-202ENST00000340477 ARHGEF16Q5VV41 709 aa22.15■■□□□ 1.14
SYNE4-202ENST00000340477 EEPD1Q7L9B9 569 aa22.15■■□□□ 1.14
SYNE4-202ENST00000340477 RMDN3Q96TC7 470 aa22.15■■□□□ 1.14
SYNE4-202ENST00000340477 AGXT2Q9BYV1 514 aa22.15■■□□□ 1.14
SYNE4-202ENST00000340477 UPF3BQ9BZI7 483 aaKnown RBP22.15■■□□□ 1.14
SYNE4-202ENST00000340477 PDRG1Q9NUG6 133 aa22.15■■□□□ 1.14
SYNE4-202ENST00000340477 CNTNAP5Q8WYK1 1306 aa22.14■■□□□ 1.14
SYNE4-202ENST00000340477 GHRHRQ02643 423 aa22.14■■□□□ 1.13
SYNE4-202ENST00000340477 TNFAIP2Q03169 654 aa22.14■■□□□ 1.13
SYNE4-202ENST00000340477 GJC2Q5T442 439 aaPredicted RBP22.14■■□□□ 1.13
SYNE4-202ENST00000340477 HEATR3Q7Z4Q2 680 aa22.14■■□□□ 1.13
SYNE4-202ENST00000340477 TBC1D5Q92609 795 aa22.14■■□□□ 1.13
SYNE4-202ENST00000340477 IWS1Q96ST2 819 aa22.14■■□□□ 1.13
SYNE4-202ENST00000340477 TNRC18O15417 2968 aaPredicted RBP22.14■■□□□ 1.13
SYNE4-202ENST00000340477 NID2Q14112 1375 aa22.13■■□□□ 1.13
SYNE4-202ENST00000340477 LRRC41Q15345 812 aa22.13■■□□□ 1.13
SYNE4-202ENST00000340477 IQSEC1Q6DN90 963 aa22.13■■□□□ 1.13
SYNE4-202ENST00000340477 LENG1Q96BZ8 264 aaPredicted RBP22.13■■□□□ 1.13
SYNE4-202ENST00000340477 KATNBL1Q9H079 304 aa22.13■■□□□ 1.13
SYNE4-202ENST00000340477 SYNRGQ9UMZ2 1314 aa22.12■■□□□ 1.13
SYNE4-202ENST00000340477 hCG_1984214I3L0E3 225 aa22.12■■□□□ 1.13
SYNE4-202ENST00000340477 OPLAHO14841 1288 aa22.12■■□□□ 1.13
SYNE4-202ENST00000340477 PGK1P00558 417 aa22.12■■□□□ 1.13
SYNE4-202ENST00000340477 EIF2AK2P19525 551 aaKnown RBP22.12■■□□□ 1.13
SYNE4-202ENST00000340477 EDNRBP24530 442 aa22.12■■□□□ 1.13
SYNE4-202ENST00000340477 HOXA13P31271 388 aaPredicted RBP22.12■■□□□ 1.13
SYNE4-202ENST00000340477 AKAP17AQ02040 695 aaKnown RBP22.12■■□□□ 1.13
SYNE4-202ENST00000340477 STXBP2Q15833 593 aa22.12■■□□□ 1.13
SYNE4-202ENST00000340477 ZNF713Q8N859 430 aaPredicted RBP22.12■■□□□ 1.13
SYNE4-202ENST00000340477 SMARCC2Q8TAQ2 1214 aa22.12■■□□□ 1.13
SYNE4-202ENST00000340477 TAAR1Q96RJ0 339 aa22.12■■□□□ 1.13
SYNE4-202ENST00000340477 AP5M1Q9H0R1 490 aa22.12■■□□□ 1.13
SYNE4-202ENST00000340477 RBM27Q9P2N5 1060 aaKnown RBP22.12■■□□□ 1.13
SYNE4-202ENST00000340477 NR2E3Q9Y5X4 410 aa22.12■■□□□ 1.13
SYNE4-202ENST00000340477 hCG_1642624A0A1W2PR95 340 aa22.11■■□□□ 1.13
SYNE4-202ENST00000340477 EVI5O60447 810 aa22.11■■□□□ 1.13
SYNE4-202ENST00000340477 C6orf222P0C671 652 aaPredicted RBP22.11■■□□□ 1.13
SYNE4-202ENST00000340477 ADCYAP1R1P41586 468 aa22.11■■□□□ 1.13
SYNE4-202ENST00000340477 MNX1P50219 401 aaPredicted RBP22.11■■□□□ 1.13
SYNE4-202ENST00000340477 ANKRD1Q15327 319 aa22.11■■□□□ 1.13
SYNE4-202ENST00000340477 FCHSD1Q86WN1 690 aa22.11■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms