RNA–Protein interactions for RNA: ENST00000319980.10

IFT88-201, Transcript of intraflagellar transport 88, humanhuman

TSL 1 (best) BASIC

Gene IFT88, Length 3,091 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT88-201ENST00000319980 RWDD2AQ9UIY3 292 aa8.52□□□□□ -1.05
IFT88-201ENST00000319980 SCN9AQ15858 1988 aa8.52□□□□□ -1.05
IFT88-201ENST00000319980 PSMD14O00487 310 aa8.52□□□□□ -1.05
IFT88-201ENST00000319980 ENTPD3O75355 529 aa8.52□□□□□ -1.05
IFT88-201ENST00000319980 DPEP1P16444 411 aa8.52□□□□□ -1.05
IFT88-201ENST00000319980 CCT6AP40227 531 aaKnown RBP8.52□□□□□ -1.05
IFT88-201ENST00000319980 SNAP25P60880 206 aa8.52□□□□□ -1.05
IFT88-201ENST00000319980 RBM26Q5T8P6 1007 aaKnown RBP8.52□□□□□ -1.05
IFT88-201ENST00000319980 PPP1R18Q6NYC8 613 aa8.52□□□□□ -1.05
IFT88-201ENST00000319980 NYAP1Q6ZVC0 841 aa8.52□□□□□ -1.05
IFT88-201ENST00000319980 RTKN2Q8IZC4 609 aa8.52□□□□□ -1.05
IFT88-201ENST00000319980 CCDC112Q8NEF3 446 aa8.52□□□□□ -1.05
IFT88-201ENST00000319980 MTMR8Q96EF0 704 aa8.52□□□□□ -1.05
IFT88-201ENST00000319980 MMTAG2Q9BU76 263 aaKnown RBP8.52□□□□□ -1.05
IFT88-201ENST00000319980 TMOD2Q9NZR1 351 aa8.52□□□□□ -1.05
IFT88-201ENST00000319980 POTEMA6NI47 508 aa8.51□□□□□ -1.05
IFT88-201ENST00000319980 MYL1P05976 194 aa8.51□□□□□ -1.05
IFT88-201ENST00000319980 CLK2P49760 499 aaKnown RBP8.51□□□□□ -1.05
IFT88-201ENST00000319980 TBX2Q13207 712 aaPredicted RBP8.51□□□□□ -1.05
IFT88-201ENST00000319980 ORC2Q13416 577 aaPredicted RBP8.51□□□□□ -1.05
IFT88-201ENST00000319980 CDC37Q16543 378 aaPredicted RBP8.51□□□□□ -1.05
IFT88-201ENST00000319980 RSBN1LQ6PCB5 846 aaPredicted RBP8.51□□□□□ -1.05
IFT88-201ENST00000319980 SPICE1Q8N0Z3 855 aa8.51□□□□□ -1.05
IFT88-201ENST00000319980 DCAF4Q8WV16 495 aa8.51□□□□□ -1.05
IFT88-201ENST00000319980 CALML4Q96GE6 196 aa8.51□□□□□ -1.05
IFT88-201ENST00000319980 CTAGE1Q96RT6 745 aa8.51□□□□□ -1.05
IFT88-201ENST00000319980 ADD3Q9UEY8 706 aaKnown RBP8.51□□□□□ -1.05
IFT88-201ENST00000319980 TRIM49BA6NDI0 452 aa8.51□□□□□ -1.05
IFT88-201ENST00000319980 SPDYE2BA6NHP3 402 aa8.51□□□□□ -1.05
IFT88-201ENST00000319980 KLRC4O43908 158 aa8.51□□□□□ -1.05
IFT88-201ENST00000319980 MARCH6O60337 910 aa8.51□□□□□ -1.05
IFT88-201ENST00000319980 NDUFB10O96000 172 aa8.51□□□□□ -1.05
IFT88-201ENST00000319980 SPDYE6P0CI01 402 aa8.51□□□□□ -1.05
IFT88-201ENST00000319980 RRP1BQ14684 758 aaKnown RBP8.51□□□□□ -1.05
IFT88-201ENST00000319980 DLGAP5Q15398 846 aa8.51□□□□□ -1.05
IFT88-201ENST00000319980 TMEM266Q2M3C6 531 aa8.51□□□□□ -1.05
IFT88-201ENST00000319980 FILIP1LQ4L180 1135 aa8.51□□□□□ -1.05
IFT88-201ENST00000319980 GJA10Q969M2 543 aa8.51□□□□□ -1.05
IFT88-201ENST00000319980 PPP1R13BQ96KQ4 1090 aa8.51□□□□□ -1.05
IFT88-201ENST00000319980 UIMC1Q96RL1 719 aa8.51□□□□□ -1.05
IFT88-201ENST00000319980 TRIM9Q9C026 710 aa8.51□□□□□ -1.05
IFT88-201ENST00000319980 TMX1Q9H3N1 280 aa8.51□□□□□ -1.05
IFT88-201ENST00000319980 CUEDC2Q9H467 287 aa8.51□□□□□ -1.05
IFT88-201ENST00000319980 XPO5Q9HAV4 1204 aaKnown RBP eCLIP8.51□□□□□ -1.05
IFT88-201ENST00000319980 DDX25Q9UHL0 483 aaKnown RBP8.51□□□□□ -1.05
IFT88-201ENST00000319980 PAXBP1Q9Y5B6 917 aa8.51□□□□□ -1.05
IFT88-201ENST00000319980 FOCADQ5VW36 1801 aa8.51□□□□□ -1.05
IFT88-201ENST00000319980 RHOBTB3O94955 611 aa8.5□□□□□ -1.05
IFT88-201ENST00000319980 KCNA3P22001 575 aa8.5□□□□□ -1.05
IFT88-201ENST00000319980 PMS1P54277 932 aaKnown RBP8.5□□□□□ -1.05
IFT88-201ENST00000319980 KCNB1Q14721 858 aa8.5□□□□□ -1.05
IFT88-201ENST00000319980 PPP4R3AQ6IN85 833 aa8.5□□□□□ -1.05
IFT88-201ENST00000319980 ADSSL1Q8N142 457 aa8.5□□□□□ -1.05
IFT88-201ENST00000319980 TC2NQ8N9U0 490 aa8.5□□□□□ -1.05
IFT88-201ENST00000319980 CPLX3Q8WVH0 158 aa8.5□□□□□ -1.05
IFT88-201ENST00000319980 BAG1Q99933 345 aaPredicted RBP8.5□□□□□ -1.05
IFT88-201ENST00000319980 RAB34Q9BZG1 259 aa8.5□□□□□ -1.05
IFT88-201ENST00000319980 KCND1Q9NSA2 647 aa8.5□□□□□ -1.05
IFT88-201ENST00000319980 ATRNL1Q5VV63 1379 aa8.5□□□□□ -1.05
IFT88-201ENST00000319980 A0A1W2PRG0 241 aa8.5□□□□□ -1.05
IFT88-201ENST00000319980 N4BP3O15049 544 aa8.5□□□□□ -1.05
IFT88-201ENST00000319980 VIL1P09327 827 aaKnown RBP8.5□□□□□ -1.05
IFT88-201ENST00000319980 GTF2F1P35269 517 aaKnown RBP eCLIP8.5□□□□□ -1.05
IFT88-201ENST00000319980 FXR2P51116 673 aaKnown RBP eCLIP8.5□□□□□ -1.05
IFT88-201ENST00000319980 ASIC1P78348 528 aa8.5□□□□□ -1.05
IFT88-201ENST00000319980 PDE4DQ08499 809 aa8.5□□□□□ -1.05
IFT88-201ENST00000319980 KRT31Q15323 416 aa8.5□□□□□ -1.05
IFT88-201ENST00000319980 USH1GQ495M9 461 aa8.5□□□□□ -1.05
IFT88-201ENST00000319980 KCTD17Q8N5Z5 321 aa8.5□□□□□ -1.05
IFT88-201ENST00000319980 GIMAP8Q8ND71 665 aaPredicted RBP8.5□□□□□ -1.05
IFT88-201ENST00000319980 EEF2KMTQ96G04 330 aa8.5□□□□□ -1.05
IFT88-201ENST00000319980 CDK5RAP3Q96JB5 506 aa8.5□□□□□ -1.05
IFT88-201ENST00000319980 PSMD1Q99460 953 aa8.5□□□□□ -1.05
IFT88-201ENST00000319980 VPS16Q9H269 839 aa8.5□□□□□ -1.05
IFT88-201ENST00000319980 VEZTQ9HBM0 779 aa8.5□□□□□ -1.05
IFT88-201ENST00000319980 HDAC9Q9UKV0 1011 aa8.5□□□□□ -1.05
IFT88-201ENST00000319980 C10orf71Q711Q0 1435 aa8.5□□□□□ -1.05
IFT88-201ENST00000319980 KCNJ6P48051 423 aa8.5□□□□□ -1.05
IFT88-201ENST00000319980 AMPD3Q01432 767 aa8.5□□□□□ -1.05
IFT88-201ENST00000319980 GRB10Q13322 594 aa8.5□□□□□ -1.05
IFT88-201ENST00000319980 STIM1Q13586 685 aa8.5□□□□□ -1.05
IFT88-201ENST00000319980 TMEM139Q8IV31 216 aa8.5□□□□□ -1.05
IFT88-201ENST00000319980 NUDT12Q9BQG2 462 aa8.5□□□□□ -1.05
IFT88-201ENST00000319980 MAGEF1Q9HAY2 307 aa8.5□□□□□ -1.05
IFT88-201ENST00000319980 PCDHA12Q9UN75 941 aa8.5□□□□□ -1.05
IFT88-201ENST00000319980 LRRC10BA6NIK2 292 aa8.49□□□□□ -1.05
IFT88-201ENST00000319980 KCNJ18B7U540 433 aa8.49□□□□□ -1.05
IFT88-201ENST00000319980 PSMA7O14818 248 aa8.49□□□□□ -1.05
IFT88-201ENST00000319980 ARHGAP6O43182 974 aa8.49□□□□□ -1.05
IFT88-201ENST00000319980 BMP3P12645 472 aa8.49□□□□□ -1.05
IFT88-201ENST00000319980 ECE1P42892 770 aa8.49□□□□□ -1.05
IFT88-201ENST00000319980 STK4Q13043 487 aa8.49□□□□□ -1.05
IFT88-201ENST00000319980 KCNJ12Q14500 433 aa8.49□□□□□ -1.05
IFT88-201ENST00000319980 PDIA5Q14554 519 aa8.49□□□□□ -1.05
IFT88-201ENST00000319980 GRIPAP1Q4V328 841 aa8.49□□□□□ -1.05
IFT88-201ENST00000319980 TCP11X2Q5H9J9 407 aa8.49□□□□□ -1.05
IFT88-201ENST00000319980 KRT79Q5XKE5 535 aa8.49□□□□□ -1.05
IFT88-201ENST00000319980 SV2BQ7L1I2 683 aa8.49□□□□□ -1.05
IFT88-201ENST00000319980 PPFIBP1Q86W92 1011 aa8.49□□□□□ -1.05
IFT88-201ENST00000319980 GMCL1P1Q8NEA9 526 aa8.49□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms