RNA–Protein interactions for RNA: ENST00000311350.7

HERPUD2-201, Transcript of HERPUD family member 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HERPUD2, Length 2,474 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD2-201ENST00000311350 DUSP10Q9Y6W6 482 aa21.03■□□□□ 0.96
HERPUD2-201ENST00000311350 IBSPP21815 317 aaPredicted RBP21.03■□□□□ 0.96
HERPUD2-201ENST00000311350 COPB1P53618 953 aaKnown RBP21.03■□□□□ 0.96
HERPUD2-201ENST00000311350 TROAPQ12815 778 aa21.03■□□□□ 0.96
HERPUD2-201ENST00000311350 TTMPQ5BVD1 217 aa21.03■□□□□ 0.96
HERPUD2-201ENST00000311350 IQCA1Q86XH1 822 aa21.03■□□□□ 0.96
HERPUD2-201ENST00000311350 MIGA1Q8NAN2 632 aa21.03■□□□□ 0.96
HERPUD2-201ENST00000311350 BLZF1Q9H2G9 400 aa21.03■□□□□ 0.96
HERPUD2-201ENST00000311350 PDXDC2PQ6P474 469 aa21.02■□□□□ 0.96
HERPUD2-201ENST00000311350 SH2D3CQ8N5H7 860 aa21.02■□□□□ 0.96
HERPUD2-201ENST00000311350 ZNF784Q8NCA9 323 aaPredicted RBP21.02■□□□□ 0.96
HERPUD2-201ENST00000311350 XDHP47989 1333 aa21.02■□□□□ 0.96
HERPUD2-201ENST00000311350 H0YHG0 523 aa21.02■□□□□ 0.96
HERPUD2-201ENST00000311350 ATP1A2P50993 1020 aa21.02■□□□□ 0.96
HERPUD2-201ENST00000311350 TSEN2Q8NCE0 465 aaKnown RBP21.02■□□□□ 0.96
HERPUD2-201ENST00000311350 LACRTQ9GZZ8 138 aa21.02■□□□□ 0.96
HERPUD2-201ENST00000311350 DMGDHQ9UI17 866 aaKnown RBP21.02■□□□□ 0.96
HERPUD2-201ENST00000311350 CNTNAP5Q8WYK1 1306 aa21.01■□□□□ 0.95
HERPUD2-201ENST00000311350 TTC26A0AVF1 554 aa21.01■□□□□ 0.95
HERPUD2-201ENST00000311350 MINDY4BA8MYZ0 360 aa21.01■□□□□ 0.95
HERPUD2-201ENST00000311350 NDUFAB1O14561 156 aa21.01■□□□□ 0.95
HERPUD2-201ENST00000311350 SLC7A5Q01650 507 aa21.01■□□□□ 0.95
HERPUD2-201ENST00000311350 ARL6IP4Q66PJ3 421 aaKnown RBP21.01■□□□□ 0.95
HERPUD2-201ENST00000311350 PRR5LQ6MZQ0 368 aa21.01■□□□□ 0.95
HERPUD2-201ENST00000311350 V9GY48 417 aaPredicted RBP21.01■□□□□ 0.95
HERPUD2-201ENST00000311350 USP8P40818 1118 aa21.01■□□□□ 0.95
HERPUD2-201ENST00000311350 PAK1Q13153 545 aa21.01■□□□□ 0.95
HERPUD2-201ENST00000311350 DALRD3Q5D0E6 543 aaKnown RBP21.01■□□□□ 0.95
HERPUD2-201ENST00000311350 ZNF658Q5TYW1 1059 aaPredicted RBP21.01■□□□□ 0.95
HERPUD2-201ENST00000311350 KCTD16Q68DU8 428 aa21.01■□□□□ 0.95
HERPUD2-201ENST00000311350 CABS1Q96KC9 395 aa21.01■□□□□ 0.95
HERPUD2-201ENST00000311350 MAPK8IP1Q9UQF2 711 aa21.01■□□□□ 0.95
HERPUD2-201ENST00000311350 ORC4O43929 436 aa21■□□□□ 0.95
HERPUD2-201ENST00000311350 PLEKHA8P1O95397 391 aa21■□□□□ 0.95
HERPUD2-201ENST00000311350 SCP2P22307 547 aa21■□□□□ 0.95
HERPUD2-201ENST00000311350 NT5C2P49902 561 aa21■□□□□ 0.95
HERPUD2-201ENST00000311350 CHRNDQ07001 517 aa21■□□□□ 0.95
HERPUD2-201ENST00000311350 CNBD1Q8NA66 436 aa21■□□□□ 0.95
HERPUD2-201ENST00000311350 LRRC1Q9BTT6 524 aa21■□□□□ 0.95
HERPUD2-201ENST00000311350 HAUS4Q9H6D7 363 aa21■□□□□ 0.95
HERPUD2-201ENST00000311350 FAM184BQ9ULE4 1060 aa21■□□□□ 0.95
HERPUD2-201ENST00000311350 SNAP23O00161 211 aa21■□□□□ 0.95
HERPUD2-201ENST00000311350 UBXN1Q04323 297 aa21■□□□□ 0.95
HERPUD2-201ENST00000311350 PTGDRQ13258 359 aa21■□□□□ 0.95
HERPUD2-201ENST00000311350 ZNF174Q15697 407 aa21■□□□□ 0.95
HERPUD2-201ENST00000311350 GBP6Q6ZN66 633 aa21■□□□□ 0.95
HERPUD2-201ENST00000311350 CLGNO14967 610 aa20.99■□□□□ 0.95
HERPUD2-201ENST00000311350 ZEB2O60315 1214 aa20.99■□□□□ 0.95
HERPUD2-201ENST00000311350 ATP2B2Q01814 1243 aa20.99■□□□□ 0.95
HERPUD2-201ENST00000311350 WDR59Q6PJI9 974 aa20.99■□□□□ 0.95
HERPUD2-201ENST00000311350 ADGRA1Q86SQ6 560 aa20.99■□□□□ 0.95
HERPUD2-201ENST00000311350 OTUD6BQ8N6M0 293 aa20.99■□□□□ 0.95
HERPUD2-201ENST00000311350 SDR42E1Q8WUS8 393 aa20.99■□□□□ 0.95
HERPUD2-201ENST00000311350 JADE2Q9NQC1 790 aa20.99■□□□□ 0.95
HERPUD2-201ENST00000311350 NIP7Q9Y221 180 aaKnown RBP eCLIP20.99■□□□□ 0.95
HERPUD2-201ENST00000311350 DDX52Q9Y2R4 599 aaKnown RBP eCLIP20.99■□□□□ 0.95
HERPUD2-201ENST00000311350 WNT7AO00755 349 aa20.99■□□□□ 0.95
HERPUD2-201ENST00000311350 LONP1P36776 959 aaKnown RBP20.99■□□□□ 0.95
HERPUD2-201ENST00000311350 MATR3P43243 847 aaKnown RBP eCLIP20.99■□□□□ 0.954e-6■■■□□ 19.1
HERPUD2-201ENST00000311350 TCP11X2Q5H9J9 407 aa20.99■□□□□ 0.95
HERPUD2-201ENST00000311350 RRAGBQ5VZM2 374 aa20.99■□□□□ 0.95
HERPUD2-201ENST00000311350 SMARCAL1Q9NZC9 954 aa20.99■□□□□ 0.95
HERPUD2-201ENST00000311350 CACNA1SQ13698 1873 aa20.98■□□□□ 0.95
HERPUD2-201ENST00000311350 H7C1D1 291 aa20.98■□□□□ 0.95
HERPUD2-201ENST00000311350 UBE4AQ14139 1066 aa20.98■□□□□ 0.95
HERPUD2-201ENST00000311350 ZNF662Q6ZS27 426 aa20.98■□□□□ 0.95
HERPUD2-201ENST00000311350 C2CD5Q86YS7 1000 aa20.98■□□□□ 0.95
HERPUD2-201ENST00000311350 CCDC24Q8N4L8 307 aa20.98■□□□□ 0.95
HERPUD2-201ENST00000311350 ZKSCAN4Q969J2 545 aaPredicted RBP20.98■□□□□ 0.95
HERPUD2-201ENST00000311350 KCNJ18B7U540 433 aa20.98■□□□□ 0.95
HERPUD2-201ENST00000311350 PRDM1O75626 825 aa20.98■□□□□ 0.95
HERPUD2-201ENST00000311350 NTSR2O95665 410 aa20.98■□□□□ 0.95
HERPUD2-201ENST00000311350 PPARDQ03181 441 aa20.98■□□□□ 0.95
HERPUD2-201ENST00000311350 CKAP4Q07065 602 aaKnown RBP20.98■□□□□ 0.95
HERPUD2-201ENST00000311350 KCNJ12Q14500 433 aa20.98■□□□□ 0.95
HERPUD2-201ENST00000311350 NBPF5PQ86XG9 351 aaPredicted RBP20.98■□□□□ 0.95
HERPUD2-201ENST00000311350 BRCA1P38398 1863 aaKnown RBP20.97■□□□□ 0.95
HERPUD2-201ENST00000311350 A0A1W2PQC6 194 aa20.97■□□□□ 0.95
HERPUD2-201ENST00000311350 MACROD2A1Z1Q3 448 aa20.97■□□□□ 0.95
HERPUD2-201ENST00000311350 GOLGA8KD6RF30 607 aa20.97■□□□□ 0.95
HERPUD2-201ENST00000311350 H0YIN7 160 aa20.97■□□□□ 0.95
HERPUD2-201ENST00000311350 MYL1P05976 194 aa20.97■□□□□ 0.95
HERPUD2-201ENST00000311350 KIAA1328Q86T90 577 aa20.97■□□□□ 0.95
HERPUD2-201ENST00000311350 SMCR8Q8TEV9 937 aaPredicted RBP20.97■□□□□ 0.95
HERPUD2-201ENST00000311350 MYH2Q9UKX2 1941 aa20.97■□□□□ 0.95
HERPUD2-201ENST00000311350 PES1O00541 588 aaKnown RBP20.97■□□□□ 0.95
HERPUD2-201ENST00000311350 MEFVO15553 781 aaPredicted RBP20.97■□□□□ 0.95
HERPUD2-201ENST00000311350 IDEP14735 1019 aa20.97■□□□□ 0.95
HERPUD2-201ENST00000311350 CALML3P27482 149 aa20.97■□□□□ 0.95
HERPUD2-201ENST00000311350 PDE6BP35913 854 aa20.97■□□□□ 0.95
HERPUD2-201ENST00000311350 NELFBQ8WX92 580 aa20.97■□□□□ 0.95
HERPUD2-201ENST00000311350 PDS5AQ29RF7 1337 aaKnown RBP20.96■□□□□ 0.95
HERPUD2-201ENST00000311350 SCG2P13521 617 aa20.96■□□□□ 0.95
HERPUD2-201ENST00000311350 PFKFB3Q16875 520 aaPredicted RBP20.96■□□□□ 0.95
HERPUD2-201ENST00000311350 ARHGAP27Q6ZUM4 889 aa20.96■□□□□ 0.95
HERPUD2-201ENST00000311350 OR8K1Q8NGG5 319 aa20.96■□□□□ 0.95
HERPUD2-201ENST00000311350 SH3GLB2Q9NR46 395 aa20.96■□□□□ 0.95
HERPUD2-201ENST00000311350 EHD2Q9NZN4 543 aa20.96■□□□□ 0.95
HERPUD2-201ENST00000311350 KIAA0754O94854 1291 aa20.96■□□□□ 0.95
HERPUD2-201ENST00000311350 FSBPO95073 299 aa20.96■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms