RNA–Protein interactions for RNA: ENST00000266880.11

CHFR-201, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 2 BASIC

Gene CHFR, Length 11,133 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-201ENST00000266880 PDE6CP51160 858 aa12.11□□□□□ -0.47
CHFR-201ENST00000266880 ETF1P62495 437 aaKnown RBP12.11□□□□□ -0.47
CHFR-201ENST00000266880 YWHAHQ04917 246 aaPredicted RBP12.11□□□□□ -0.47
CHFR-201ENST00000266880 USH1GQ495M9 461 aa12.11□□□□□ -0.47
CHFR-201ENST00000266880 MAGOHBQ96A72 148 aaKnown RBP12.11□□□□□ -0.47
CHFR-201ENST00000266880 STX18Q9P2W9 335 aaKnown RBP12.11□□□□□ -0.47
CHFR-201ENST00000266880 ANAPC5Q9UJX4 755 aa12.11□□□□□ -0.47
CHFR-201ENST00000266880 TRPC6Q9Y210 931 aa12.11□□□□□ -0.47
CHFR-201ENST00000266880 PTPN23Q9H3S7 1636 aa12.11□□□□□ -0.47
CHFR-201ENST00000266880 XRCC5P13010 732 aaKnown RBP12.11□□□□□ -0.47
CHFR-201ENST00000266880 YARSP54577 528 aaKnown RBP12.11□□□□□ -0.47
CHFR-201ENST00000266880 TPH2Q8IWU9 490 aa12.11□□□□□ -0.47
CHFR-201ENST00000266880 ABCF3Q9NUQ8 709 aa12.11□□□□□ -0.47
CHFR-201ENST00000266880 TRAF3IP3Q9Y228 551 aa12.11□□□□□ -0.47
CHFR-201ENST00000266880 MAP3K1Q13233 1512 aa12.1□□□□□ -0.47
CHFR-201ENST00000266880 MCF2LO15068 1137 aa12.1□□□□□ -0.47
CHFR-201ENST00000266880 MAPK13O15264 365 aa12.1□□□□□ -0.47
CHFR-201ENST00000266880 CLCN6P51797 869 aa12.1□□□□□ -0.47
CHFR-201ENST00000266880 PRPSAP1Q14558 356 aa12.1□□□□□ -0.47
CHFR-201ENST00000266880 GPBP1Q86WP2 473 aa12.1□□□□□ -0.47
CHFR-201ENST00000266880 CEP78Q5JTW2 689 aa12.1□□□□□ -0.47
CHFR-201ENST00000266880 IQCDQ96DY2 449 aa12.1□□□□□ -0.47
CHFR-201ENST00000266880 ECT2Q9H8V3 914 aa12.1□□□□□ -0.47
CHFR-201ENST00000266880 ANGEL1Q9UNK9 670 aaKnown RBP12.1□□□□□ -0.47
CHFR-201ENST00000266880 IL16Q14005 1332 aa12.1□□□□□ -0.47
CHFR-201ENST00000266880 PFDN6O15212 129 aa12.1□□□□□ -0.47
CHFR-201ENST00000266880 ABL1P00519 1130 aa12.1□□□□□ -0.47
CHFR-201ENST00000266880 KIF11P52732 1056 aa12.1□□□□□ -0.47
CHFR-201ENST00000266880 PLTPP55058 493 aa12.1□□□□□ -0.47
CHFR-201ENST00000266880 MYO1CO00159 1063 aa12.1□□□□□ -0.47
CHFR-201ENST00000266880 TTI1O43156 1089 aa12.1□□□□□ -0.47
CHFR-201ENST00000266880 APOA1P02647 267 aa12.1□□□□□ -0.47
CHFR-201ENST00000266880 SNRPA1P09661 255 aaKnown RBP12.1□□□□□ -0.47
CHFR-201ENST00000266880 TCP1P17987 556 aaKnown RBP12.1□□□□□ -0.47
CHFR-201ENST00000266880 TNNQ9UQP3 1299 aa12.1□□□□□ -0.47
CHFR-201ENST00000266880 ENO4A6NNW6 628 aa12.1□□□□□ -0.47
CHFR-201ENST00000266880 AFAP1Q8N556 730 aa12.1□□□□□ -0.47
CHFR-201ENST00000266880 CCDC90BQ9GZT6 254 aa12.1□□□□□ -0.47
CHFR-201ENST00000266880 LDHBP07195 334 aaKnown RBP12.1□□□□□ -0.47
CHFR-201ENST00000266880 VCAM1P19320 739 aa12.1□□□□□ -0.47
CHFR-201ENST00000266880 CDC23Q9UJX2 597 aa12.1□□□□□ -0.47
CHFR-201ENST00000266880 PDXDC1Q6P996 788 aa12.1□□□□□ -0.47
CHFR-201ENST00000266880 ANKRD13CQ8N6S4 541 aa12.1□□□□□ -0.47
CHFR-201ENST00000266880 OTUD7AQ8TE49 926 aaPredicted RBP12.1□□□□□ -0.47
CHFR-201ENST00000266880 ZNF277Q9NRM2 450 aaPredicted RBP12.1□□□□□ -0.47
CHFR-201ENST00000266880 FGFR1OP2Q9NVK5 253 aa12.1□□□□□ -0.47
CHFR-201ENST00000266880 EIF3CLB5ME19 914 aaKnown RBP12.1□□□□□ -0.47
CHFR-201ENST00000266880 TMEM232C9JQI7 657 aa12.1□□□□□ -0.47
CHFR-201ENST00000266880 PFKFB1P16118 471 aa12.1□□□□□ -0.47
CHFR-201ENST00000266880 TMED10P49755 219 aaKnown RBP12.1□□□□□ -0.47
CHFR-201ENST00000266880 MESDQ14696 234 aa12.1□□□□□ -0.47
CHFR-201ENST00000266880 LMBR1LQ6UX01 489 aa12.1□□□□□ -0.47
CHFR-201ENST00000266880 PDZD4Q76G19 769 aaPredicted RBP12.1□□□□□ -0.47
CHFR-201ENST00000266880 EIF3CQ99613 913 aaKnown RBP12.1□□□□□ -0.47
CHFR-201ENST00000266880 NRBP1Q9UHY1 535 aa12.1□□□□□ -0.47
CHFR-201ENST00000266880 IFRD2Q12894 506 aaPredicted RBP12.1□□□□□ -0.47
CHFR-201ENST00000266880 KIF19Q2TAC6 998 aa12.1□□□□□ -0.47
CHFR-201ENST00000266880 PARP9Q8IXQ6 854 aa12.1□□□□□ -0.47
CHFR-201ENST00000266880 TTC21BQ7Z4L5 1316 aa12.09□□□□□ -0.47
CHFR-201ENST00000266880 OLFML2BQ68BL8 750 aa12.09□□□□□ -0.47
CHFR-201ENST00000266880 TDRD7Q8NHU6 1098 aaKnown RBP12.09□□□□□ -0.47
CHFR-201ENST00000266880 CCHCR1Q8TD31 782 aa12.09□□□□□ -0.47
CHFR-201ENST00000266880 TMA7Q9Y2S6 64 aaKnown RBP12.09□□□□□ -0.47
CHFR-201ENST00000266880 RFX1P22670 979 aa12.09□□□□□ -0.47
CHFR-201ENST00000266880 TPP2P29144 1249 aaPredicted RBP12.09□□□□□ -0.47
CHFR-201ENST00000266880 SLC7A5Q01650 507 aa12.09□□□□□ -0.47
CHFR-201ENST00000266880 NOVA2Q9UNW9 492 aaKnown RBP12.09□□□□□ -0.47
CHFR-201ENST00000266880 DMPKQ09013 629 aa12.09□□□□□ -0.47
CHFR-201ENST00000266880 PTPN21Q16825 1174 aa12.09□□□□□ -0.47
CHFR-201ENST00000266880 TAGAPQ8N103 731 aa12.09□□□□□ -0.47
CHFR-201ENST00000266880 C1orf112Q9NSG2 853 aa12.09□□□□□ -0.47
CHFR-201ENST00000266880 LRWD1Q9UFC0 647 aa12.09□□□□□ -0.47
CHFR-201ENST00000266880 PRR23D1E9PI22 279 aaPredicted RBP12.09□□□□□ -0.47
CHFR-201ENST00000266880 PRR23D2P0DMB1 279 aaPredicted RBP12.09□□□□□ -0.47
CHFR-201ENST00000266880 FAM102BQ5T8I3 360 aa12.09□□□□□ -0.47
CHFR-201ENST00000266880 DIS3L2Q8IYB7 885 aaKnown RBP12.09□□□□□ -0.47
CHFR-201ENST00000266880 RUNDC3BQ96NL0 473 aa12.09□□□□□ -0.47
CHFR-201ENST00000266880 RNF207Q6ZRF8 634 aa12.09□□□□□ -0.47
CHFR-201ENST00000266880 KLC2Q9H0B6 622 aa12.09□□□□□ -0.47
CHFR-201ENST00000266880 COPG1Q9Y678 874 aaKnown RBP12.09□□□□□ -0.47
CHFR-201ENST00000266880 EXOC1LA0A1B0GW35 172 aa12.09□□□□□ -0.47
CHFR-201ENST00000266880 ACSL3O95573 720 aa12.09□□□□□ -0.47
CHFR-201ENST00000266880 HDAC4P56524 1084 aa12.09□□□□□ -0.47
CHFR-201ENST00000266880 OCRLQ01968 901 aa12.09□□□□□ -0.47
CHFR-201ENST00000266880 SNX5Q9Y5X3 404 aa12.09□□□□□ -0.47
CHFR-201ENST00000266880 CCDC61Q9Y6R9 512 aa12.09□□□□□ -0.47
CHFR-201ENST00000266880 RASGRF2O14827 1237 aa12.09□□□□□ -0.47
CHFR-201ENST00000266880 UBE2Q1Q7Z7E8 422 aa12.09□□□□□ -0.47
CHFR-201ENST00000266880 PGBD1Q96JS3 809 aa12.09□□□□□ -0.47
CHFR-201ENST00000266880 FAM8A1Q9UBU6 413 aa12.09□□□□□ -0.47
CHFR-201ENST00000266880 ZFP69BQ9UJL9 534 aa12.09□□□□□ -0.47
CHFR-201ENST00000266880 EXOC5O00471 708 aa12.09□□□□□ -0.47
CHFR-201ENST00000266880 POLR2FP61218 127 aaKnown RBP12.09□□□□□ -0.47
CHFR-201ENST00000266880 ALS2CLQ60I27 953 aa12.09□□□□□ -0.47
CHFR-201ENST00000266880 OLFM3Q96PB7 478 aa12.09□□□□□ -0.47
CHFR-201ENST00000266880 GYG2O15488 501 aa12.09□□□□□ -0.47
CHFR-201ENST00000266880 RFC4P35249 363 aa12.09□□□□□ -0.47
CHFR-201ENST00000266880 DYNLT1P63172 113 aa12.09□□□□□ -0.47
CHFR-201ENST00000266880 CTDSPL2Q05D32 466 aa12.09□□□□□ -0.47
CHFR-201ENST00000266880 TIAM1Q13009 1591 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms