RNA–Protein interactions for RNA: ENST00000237289.8

TNFAIP3-201, Transcript of TNF alpha induced protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFAIP3, Length 4,432 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP3-201ENST00000237289 BRDTQ58F21 947 aaPredicted RBP12.65□□□□□ -0.38
TNFAIP3-201ENST00000237289 ANO3Q9BYT9 981 aa12.65□□□□□ -0.38
TNFAIP3-201ENST00000237289 PCDHA6Q9UN73 950 aa12.65□□□□□ -0.38
TNFAIP3-201ENST00000237289 PCDHA8Q9Y5H6 950 aa12.65□□□□□ -0.38
TNFAIP3-201ENST00000237289 CCND2P30279 289 aa12.65□□□□□ -0.38
TNFAIP3-201ENST00000237289 SP3Q02447 781 aa12.65□□□□□ -0.38
TNFAIP3-201ENST00000237289 TTC38Q5R3I4 469 aa12.65□□□□□ -0.38
TNFAIP3-201ENST00000237289 GJB4Q9NTQ9 266 aa12.65□□□□□ -0.38
TNFAIP3-201ENST00000237289 FAM217BQ9NTX9 383 aaPredicted RBP12.65□□□□□ -0.38
TNFAIP3-201ENST00000237289 FAM13BQ9NYF5 915 aa12.65□□□□□ -0.38
TNFAIP3-201ENST00000237289 CYTH3O43739 400 aa12.65□□□□□ -0.38
TNFAIP3-201ENST00000237289 NTRK3Q16288 839 aa12.65□□□□□ -0.38
TNFAIP3-201ENST00000237289 MOV10L1Q9BXT6 1211 aaKnown RBP12.65□□□□□ -0.38
TNFAIP3-201ENST00000237289 STXBP3O00186 592 aa12.64□□□□□ -0.39
TNFAIP3-201ENST00000237289 CYP2B6P20813 491 aa12.64□□□□□ -0.39
TNFAIP3-201ENST00000237289 LBX2Q6XYB7 198 aa12.64□□□□□ -0.39
TNFAIP3-201ENST00000237289 STRNO43815 780 aa12.64□□□□□ -0.39
TNFAIP3-201ENST00000237289 CTDNEP1O95476 244 aa12.64□□□□□ -0.39
TNFAIP3-201ENST00000237289 GJA5P36382 358 aa12.64□□□□□ -0.39
TNFAIP3-201ENST00000237289 SP4Q02446 784 aa12.64□□□□□ -0.39
TNFAIP3-201ENST00000237289 NR5A1Q13285 461 aa12.64□□□□□ -0.39
TNFAIP3-201ENST00000237289 TMEM132BQ14DG7 1078 aa12.64□□□□□ -0.39
TNFAIP3-201ENST00000237289 KIAA1755Q5JYT7 1200 aa12.64□□□□□ -0.39
TNFAIP3-201ENST00000237289 EEPD1Q7L9B9 569 aa12.64□□□□□ -0.39
TNFAIP3-201ENST00000237289 RIOX2Q8IUF8 465 aa12.64□□□□□ -0.39
TNFAIP3-201ENST00000237289 TBCKQ8TEA7 893 aa12.64□□□□□ -0.39
TNFAIP3-201ENST00000237289 ERO1AQ96HE7 468 aa12.64□□□□□ -0.39
TNFAIP3-201ENST00000237289 EFCC1Q9HA90 598 aa12.64□□□□□ -0.39
TNFAIP3-201ENST00000237289 RTEL1Q9NZ71 1219 aa12.64□□□□□ -0.39
TNFAIP3-201ENST00000237289 ZHX1Q9UKY1 873 aaPredicted RBP12.64□□□□□ -0.39
TNFAIP3-201ENST00000237289 PSMC4P43686 418 aa12.64□□□□□ -0.39
TNFAIP3-201ENST00000237289 FAM110CQ1W6H9 321 aa12.64□□□□□ -0.39
TNFAIP3-201ENST00000237289 SPC25Q9HBM1 224 aa12.64□□□□□ -0.39
TNFAIP3-201ENST00000237289 ZCCHC17Q9NP64 241 aaKnown RBP12.64□□□□□ -0.39
TNFAIP3-201ENST00000237289 ASB14A6NK59 587 aa12.63□□□□□ -0.39
TNFAIP3-201ENST00000237289 RASSF10A6NK89 507 aa12.63□□□□□ -0.39
TNFAIP3-201ENST00000237289 DDX11L8A8MPP1 907 aa12.63□□□□□ -0.39
TNFAIP3-201ENST00000237289 RPS6P62753 249 aaKnown RBP12.63□□□□□ -0.39
TNFAIP3-201ENST00000237289 STXBP2Q15833 593 aa12.63□□□□□ -0.39
TNFAIP3-201ENST00000237289 PRR16Q569H4 304 aa12.63□□□□□ -0.39
TNFAIP3-201ENST00000237289 ERMNQ8TAM6 284 aa12.63□□□□□ -0.39
TNFAIP3-201ENST00000237289 TULP1O00294 542 aaPredicted RBP12.63□□□□□ -0.39
TNFAIP3-201ENST00000237289 PLA2G4DQ86XP0 818 aa12.63□□□□□ -0.39
TNFAIP3-201ENST00000237289 TLR2O60603 784 aa12.63□□□□□ -0.39
TNFAIP3-201ENST00000237289 RGS2P41220 211 aa12.63□□□□□ -0.39
TNFAIP3-201ENST00000237289 MFSD14CQ5VZR4 134 aa12.63□□□□□ -0.39
TNFAIP3-201ENST00000237289 SEPT14Q6ZU15 432 aa12.63□□□□□ -0.39
TNFAIP3-201ENST00000237289 VTI1AQ96AJ9 217 aa12.63□□□□□ -0.39
TNFAIP3-201ENST00000237289 NOP56O00567 594 aaKnown RBP12.63□□□□□ -0.39
TNFAIP3-201ENST00000237289 SYAP1Q96A49 352 aaPredicted RBP12.63□□□□□ -0.39
TNFAIP3-201ENST00000237289 CDHR1Q96JP9 859 aa12.63□□□□□ -0.39
TNFAIP3-201ENST00000237289 SDF4Q9BRK5 362 aa12.63□□□□□ -0.39
TNFAIP3-201ENST00000237289 MAP3K20Q9NYL2 800 aaKnown RBP12.63□□□□□ -0.39
TNFAIP3-201ENST00000237289 HOOK1Q9UJC3 728 aaKnown RBP12.63□□□□□ -0.39
TNFAIP3-201ENST00000237289 MTMR6Q9Y217 621 aa12.63□□□□□ -0.39
TNFAIP3-201ENST00000237289 MRVI1Q9Y6F6 885 aa12.63□□□□□ -0.39
TNFAIP3-201ENST00000237289 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.62□□□□□ -0.39
TNFAIP3-201ENST00000237289 FKTNO75072 461 aa12.62□□□□□ -0.39
TNFAIP3-201ENST00000237289 UBA7P41226 1012 aa12.62□□□□□ -0.39
TNFAIP3-201ENST00000237289 CRHR2Q13324 411 aa12.62□□□□□ -0.39
TNFAIP3-201ENST00000237289 DTHD1Q6ZMT9 781 aa12.62□□□□□ -0.39
TNFAIP3-201ENST00000237289 SAMD3Q8N6K7 520 aa12.62□□□□□ -0.39
TNFAIP3-201ENST00000237289 ZMYND12Q9H0C1 365 aa12.62□□□□□ -0.39
TNFAIP3-201ENST00000237289 ADAMTSL1Q8N6G6 1762 aa12.62□□□□□ -0.39
TNFAIP3-201ENST00000237289 FDPSP14324 419 aaKnown RBP12.62□□□□□ -0.39
TNFAIP3-201ENST00000237289 MYSM1Q5VVJ2 828 aa12.62□□□□□ -0.39
TNFAIP3-201ENST00000237289 ATL3Q6DD88 541 aa12.62□□□□□ -0.39
TNFAIP3-201ENST00000237289 MLXIPQ9HAP2 919 aa12.62□□□□□ -0.39
TNFAIP3-201ENST00000237289 TMEM260Q9NX78 707 aa12.62□□□□□ -0.39
TNFAIP3-201ENST00000237289 ESYT2A0FGR8 921 aa12.62□□□□□ -0.39
TNFAIP3-201ENST00000237289 NFIBO00712 420 aa12.62□□□□□ -0.39
TNFAIP3-201ENST00000237289 PRPF40AO75400 957 aaKnown RBP12.62□□□□□ -0.39
TNFAIP3-201ENST00000237289 DNM1Q05193 864 aaKnown RBP12.62□□□□□ -0.39
TNFAIP3-201ENST00000237289 CALCRLQ16602 461 aa12.62□□□□□ -0.39
TNFAIP3-201ENST00000237289 TRMT1LQ7Z2T5 733 aaKnown RBP12.62□□□□□ -0.39
TNFAIP3-201ENST00000237289 KCNG4Q8TDN1 519 aa12.62□□□□□ -0.39
TNFAIP3-201ENST00000237289 CCDC39Q9UFE4 941 aa12.62□□□□□ -0.39
TNFAIP3-201ENST00000237289 DDX25Q9UHL0 483 aaKnown RBP12.62□□□□□ -0.39
TNFAIP3-201ENST00000237289 NEMFO60524 1076 aa12.61□□□□□ -0.39
TNFAIP3-201ENST00000237289 TRAPPC10P48553 1259 aa12.61□□□□□ -0.39
TNFAIP3-201ENST00000237289 NOVP48745 357 aa12.61□□□□□ -0.39
TNFAIP3-201ENST00000237289 CKAP2LQ8IYA6 745 aa12.61□□□□□ -0.39
TNFAIP3-201ENST00000237289 CCDC47Q96A33 483 aaKnown RBP12.61□□□□□ -0.39
TNFAIP3-201ENST00000237289 MS4A4AQ96JQ5 239 aa12.61□□□□□ -0.39
TNFAIP3-201ENST00000237289 SSBP05455 408 aaKnown RBP eCLIP12.61□□□□□ -0.39
TNFAIP3-201ENST00000237289 GCFC2P16383 781 aaKnown RBP12.61□□□□□ -0.39
TNFAIP3-201ENST00000237289 FAM173BQ6P4H8 233 aa12.61□□□□□ -0.39
TNFAIP3-201ENST00000237289 DDX49Q9Y6V7 483 aaKnown RBP12.61□□□□□ -0.39
TNFAIP3-201ENST00000237289 IGF2BP3O00425 579 aaKnown RBP eCLIP12.61□□□□□ -0.39
TNFAIP3-201ENST00000237289 BACH1O14867 736 aa12.61□□□□□ -0.39
TNFAIP3-201ENST00000237289 MARCKSP29966 332 aaPredicted RBP12.61□□□□□ -0.39
TNFAIP3-201ENST00000237289 TXKP42681 527 aa12.61□□□□□ -0.39
TNFAIP3-201ENST00000237289 SHCBP1Q8NEM2 672 aa12.61□□□□□ -0.39
TNFAIP3-201ENST00000237289 UIMC1Q96RL1 719 aa12.61□□□□□ -0.39
TNFAIP3-201ENST00000237289 PHF20Q9BVI0 1012 aa12.61□□□□□ -0.39
TNFAIP3-201ENST00000237289 BAZ2BQ9UIF8 2168 aaKnown RBP12.61□□□□□ -0.39
TNFAIP3-201ENST00000237289 DDX39AO00148 427 aaKnown RBP12.61□□□□□ -0.39
TNFAIP3-201ENST00000237289 KRT18P05783 430 aaKnown RBP12.61□□□□□ -0.39
TNFAIP3-201ENST00000237289 PGK2P07205 417 aa12.61□□□□□ -0.39
TNFAIP3-201ENST00000237289 ARHGAP4P98171 946 aa12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 78.8 ms