RNA–Protein interactions for RNA: ENSMUST00000108531.7

Nup88-203, Transcript of Nuclear pore complex protein Nup88, mousemouse

TSL 1 (best) BASIC

Gene Nup88, Length 2,453 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Nup88-203ENSMUST00000108531 Kif22Q3V300 660 aa14.37□□□□□ -0.11
Nup88-203ENSMUST00000108531 Tnni3kQ5GIG6 834 aa14.37□□□□□ -0.11
Nup88-203ENSMUST00000108531 Recql4Q75NR7 1216 aaKnown RBP14.37□□□□□ -0.11
Nup88-203ENSMUST00000108531 Spata16Q8C636 571 aa14.37□□□□□ -0.11
Nup88-203ENSMUST00000108531 Plagl2Q925T4 496 aa14.37□□□□□ -0.11
Nup88-203ENSMUST00000108531 Angptl3Q9R182 455 aa14.37□□□□□ -0.11
Nup88-203ENSMUST00000108531 C4bP01029 1738 aa14.37□□□□□ -0.11
Nup88-203ENSMUST00000108531 JcadQ5DTX6 1320 aa14.37□□□□□ -0.11
Nup88-203ENSMUST00000108531 Gm13023A2A8N2 498 aa14.36□□□□□ -0.11
Nup88-203ENSMUST00000108531 Gm3893E9Q1I1 302 aa14.36□□□□□ -0.11
Nup88-203ENSMUST00000108531 Man1a2P39098 641 aa14.36□□□□□ -0.11
Nup88-203ENSMUST00000108531 Capza3P70190 299 aa14.36□□□□□ -0.11
Nup88-203ENSMUST00000108531 Gcnt1Q09324 428 aa14.36□□□□□ -0.11
Nup88-203ENSMUST00000108531 Rc3h1Q4VGL6 1130 aaKnown RBP14.36□□□□□ -0.11
Nup88-203ENSMUST00000108531 Grm4Q68EF4 912 aa14.36□□□□□ -0.11
Nup88-203ENSMUST00000108531 Adcy2Q80TL1 1090 aa14.36□□□□□ -0.11
Nup88-203ENSMUST00000108531 Ccdc172Q810N9 267 aa14.36□□□□□ -0.11
Nup88-203ENSMUST00000108531 Prl7b1Q8CGZ9 251 aa14.36□□□□□ -0.11
Nup88-203ENSMUST00000108531 Usp15Q8R5H1 981 aa14.36□□□□□ -0.11
Nup88-203ENSMUST00000108531 HibadhQ99L13 335 aaKnown RBP14.36□□□□□ -0.11
Nup88-203ENSMUST00000108531 Glrx3Q9CQM9 337 aa14.36□□□□□ -0.11
Nup88-203ENSMUST00000108531 Knop1Q9Z2Q2 478 aaKnown RBP14.36□□□□□ -0.11
Nup88-203ENSMUST00000108531 Folh1O35409 752 aa14.36□□□□□ -0.11
Nup88-203ENSMUST00000108531 Mboat4P0C7A3 435 aa14.36□□□□□ -0.11
Nup88-203ENSMUST00000108531 Pla2g4aP47713 748 aa14.36□□□□□ -0.11
Nup88-203ENSMUST00000108531 Gfpt1P47856 697 aa14.36□□□□□ -0.11
Nup88-203ENSMUST00000108531 Ppp4cP97470 307 aa14.36□□□□□ -0.11
Nup88-203ENSMUST00000108531 Ell2Q3UKU1 639 aa14.36□□□□□ -0.11
Nup88-203ENSMUST00000108531 Znf280dQ68FE8 974 aa14.36□□□□□ -0.11
Nup88-203ENSMUST00000108531 Krit1Q6S5J6 736 aa14.36□□□□□ -0.11
Nup88-203ENSMUST00000108531 Srp68Q8BMA6 625 aaKnown RBP14.36□□□□□ -0.11
Nup88-203ENSMUST00000108531 Slc9b1Q8C0X2 565 aa14.36□□□□□ -0.11
Nup88-203ENSMUST00000108531 Tbc1d23Q8K0F1 684 aa14.36□□□□□ -0.11
Nup88-203ENSMUST00000108531 Mmgt1Q8K273 131 aaKnown RBP14.36□□□□□ -0.11
Nup88-203ENSMUST00000108531 Ifih1Q8R5F7 1025 aa14.36□□□□□ -0.11
Nup88-203ENSMUST00000108531 TbcbQ9D1E6 244 aa14.36□□□□□ -0.11
Nup88-203ENSMUST00000108531 Brwd3A2AHJ4 1799 aa14.35□□□□□ -0.11
Nup88-203ENSMUST00000108531 Gm42641I6L9G2 585 aa14.35□□□□□ -0.11
Nup88-203ENSMUST00000108531 Klra1P20937 262 aa14.35□□□□□ -0.11
Nup88-203ENSMUST00000108531 Alppl2P24823 529 aa14.35□□□□□ -0.11
Nup88-203ENSMUST00000108531 Prpf38aQ4FK66 312 aaKnown RBP14.35□□□□□ -0.11
Nup88-203ENSMUST00000108531 Ccdc157Q5SPX1 718 aa14.35□□□□□ -0.11
Nup88-203ENSMUST00000108531 Cep70Q6IQY5 616 aa14.35□□□□□ -0.11
Nup88-203ENSMUST00000108531 Ppm1eQ80TL0 749 aa14.35□□□□□ -0.11
Nup88-203ENSMUST00000108531 AtripQ8BMG1 785 aa14.35□□□□□ -0.11
Nup88-203ENSMUST00000108531 Erlin1Q91X78 346 aa14.35□□□□□ -0.11
Nup88-203ENSMUST00000108531 Ccdc96Q9CR92 584 aa14.35□□□□□ -0.11
Nup88-203ENSMUST00000108531 Cd274Q9EP73 290 aa14.35□□□□□ -0.11
Nup88-203ENSMUST00000108531 Ndst4Q9EQW8 872 aa14.35□□□□□ -0.11
Nup88-203ENSMUST00000108531 Gm7356A0A087WSA6 508 aa14.35□□□□□ -0.11
Nup88-203ENSMUST00000108531 Armc3A2AU72 881 aa14.35□□□□□ -0.11
Nup88-203ENSMUST00000108531 Kifc2O08672 792 aa14.35□□□□□ -0.11
Nup88-203ENSMUST00000108531 Eya3P97480 510 aa14.35□□□□□ -0.11
Nup88-203ENSMUST00000108531 Carmil2Q3V3V9 1296 aa14.35□□□□□ -0.11
Nup88-203ENSMUST00000108531 HmcesQ8R1M0 353 aaKnown RBP14.35□□□□□ -0.11
Nup88-203ENSMUST00000108531 AdpgkQ8VDL4 496 aa14.35□□□□□ -0.11
Nup88-203ENSMUST00000108531 Eif4a3Q91VC3 411 aaKnown RBP14.35□□□□□ -0.11
Nup88-203ENSMUST00000108531 Tktl2Q9D4D4 627 aa14.35□□□□□ -0.11
Nup88-203ENSMUST00000108531 Rbm6S4R1W5 1118 aaKnown RBP14.35□□□□□ -0.11
Nup88-203ENSMUST00000108531 Magea10A2AMW4 325 aa14.34□□□□□ -0.11
Nup88-203ENSMUST00000108531 Pdrg1P59048 133 aa14.34□□□□□ -0.11
Nup88-203ENSMUST00000108531 GscQ02591 256 aa14.34□□□□□ -0.11
Nup88-203ENSMUST00000108531 Kdm7aQ3UWM4 940 aa14.34□□□□□ -0.11
Nup88-203ENSMUST00000108531 Kcnj11Q61743 390 aa14.34□□□□□ -0.11
Nup88-203ENSMUST00000108531 PodnQ7TQ62 611 aa14.34□□□□□ -0.11
Nup88-203ENSMUST00000108531 Smtnl1Q99LM3 459 aa14.34□□□□□ -0.11
Nup88-203ENSMUST00000108531 March8Q9DBD2 286 aa14.34□□□□□ -0.11
Nup88-203ENSMUST00000108531 Peg12Q9WVA7 283 aa14.34□□□□□ -0.11
Nup88-203ENSMUST00000108531 Plcb1Q9Z1B3 1216 aa14.34□□□□□ -0.11
Nup88-203ENSMUST00000108531 Ranbp1P34022 203 aaKnown RBP14.34□□□□□ -0.11
Nup88-203ENSMUST00000108531 Cct5P80316 541 aaKnown RBP14.34□□□□□ -0.11
Nup88-203ENSMUST00000108531 VrtnQ3SYK4 740 aa14.34□□□□□ -0.11
Nup88-203ENSMUST00000108531 Trim6Q8BGE7 488 aa14.34□□□□□ -0.11
Nup88-203ENSMUST00000108531 Rcor2Q8C796 523 aa14.34□□□□□ -0.11
Nup88-203ENSMUST00000108531 Krt79Q8VED5 531 aa14.34□□□□□ -0.11
Nup88-203ENSMUST00000108531 PpanQ91YU8 470 aaKnown RBP14.34□□□□□ -0.11
Nup88-203ENSMUST00000108531 Bcl2l12Q9D3J3 255 aa14.34□□□□□ -0.11
Nup88-203ENSMUST00000108531 Lztfl1Q9JHQ5 299 aa14.34□□□□□ -0.11
Nup88-203ENSMUST00000108531 Gm45208A0A140LJ36 292 aa14.33□□□□□ -0.12
Nup88-203ENSMUST00000108531 Zscan18E9PUD6 809 aa14.33□□□□□ -0.12
Nup88-203ENSMUST00000108531 Prl2c2P04095 224 aa14.33□□□□□ -0.12
Nup88-203ENSMUST00000108531 LdhaP06151 332 aaKnown RBP14.33□□□□□ -0.12
Nup88-203ENSMUST00000108531 Abcb4P21440 1276 aa14.33□□□□□ -0.12
Nup88-203ENSMUST00000108531 Sec31aQ3UPL0 1230 aaKnown RBP14.33□□□□□ -0.12
Nup88-203ENSMUST00000108531 BcrQ6PAJ1 1270 aa14.33□□□□□ -0.12
Nup88-203ENSMUST00000108531 Drd5Q8BLD9 478 aa14.33□□□□□ -0.12
Nup88-203ENSMUST00000108531 Q8BT18 775 aa14.33□□□□□ -0.12
Nup88-203ENSMUST00000108531 Cdan1Q8CC12 1239 aa14.33□□□□□ -0.12
Nup88-203ENSMUST00000108531 Vcpip1Q8CDG3 1220 aa14.33□□□□□ -0.12
Nup88-203ENSMUST00000108531 OplahQ8K010 1288 aa14.33□□□□□ -0.12
Nup88-203ENSMUST00000108531 Cdk8Q8R3L8 464 aa14.33□□□□□ -0.12
Nup88-203ENSMUST00000108531 Dydc2Q9D3X8 139 aa14.33□□□□□ -0.12
Nup88-203ENSMUST00000108531 Mrpl12Q9DB15 201 aaKnown RBP14.33□□□□□ -0.12
Nup88-203ENSMUST00000108531 Gm28919A0A087WP35 240 aa14.33□□□□□ -0.12
Nup88-203ENSMUST00000108531 Tcp1P11983 556 aaKnown RBP14.33□□□□□ -0.12
Nup88-203ENSMUST00000108531 Pstpip1P97814 415 aa14.33□□□□□ -0.12
Nup88-203ENSMUST00000108531 Ccdc51Q3URS9 406 aa14.33□□□□□ -0.12
Nup88-203ENSMUST00000108531 Ezh2Q61188 746 aaKnown RBP14.33□□□□□ -0.12
Nup88-203ENSMUST00000108531 Tlr13Q6R5N8 991 aa14.33□□□□□ -0.12
Nup88-203ENSMUST00000108531 RragaQ80X95 313 aa14.33□□□□□ -0.12
Retrieved 100 of 22,080 RNA–protein pairs in 78 ms