RNA–Protein interactions for RNA: ENST00000640341.1

SCARB2-221, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5

Gene SCARB2, Length 3,403 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-221ENST00000640341 SLC35G1Q2M3R5 365 aa16.33■□□□□ 0.2
SCARB2-221ENST00000640341 ARL6IP4Q66PJ3 421 aaKnown RBP16.33■□□□□ 0.2
SCARB2-221ENST00000640341 TMEM47Q9BQJ4 181 aa16.33■□□□□ 0.2
SCARB2-221ENST00000640341 SMCO2A6NFE2 343 aa16.33■□□□□ 0.2
SCARB2-221ENST00000640341 WDR59Q6PJI9 974 aa16.33■□□□□ 0.2
SCARB2-221ENST00000640341 LEKR1Q6ZMV7 388 aa16.33■□□□□ 0.2
SCARB2-221ENST00000640341 NHEJ1Q9H9Q4 299 aaPredicted RBP16.33■□□□□ 0.2
SCARB2-221ENST00000640341 MAD2L2Q9UI95 211 aa16.33■□□□□ 0.2
SCARB2-221ENST00000640341 CICQ96RK0 1608 aaPredicted RBP16.32■□□□□ 0.2
SCARB2-221ENST00000640341 POTEB2H3BUK9 544 aa16.32■□□□□ 0.2
SCARB2-221ENST00000640341 SOGA3Q5TF21 947 aa16.32■□□□□ 0.2
SCARB2-221ENST00000640341 C10orf67Q8IYJ2 551 aa16.32■□□□□ 0.2
SCARB2-221ENST00000640341 CCDC47Q96A33 483 aaKnown RBP16.32■□□□□ 0.2
SCARB2-221ENST00000640341 FRMPD2Q68DX3 1309 aaPredicted RBP16.32■□□□□ 0.2
SCARB2-221ENST00000640341 KRT86O43790 486 aa16.32■□□□□ 0.2
SCARB2-221ENST00000640341 GJA10Q969M2 543 aa16.32■□□□□ 0.2
SCARB2-221ENST00000640341 CCDC42Q96M95 316 aa16.32■□□□□ 0.2
SCARB2-221ENST00000640341 TMEM260Q9NX78 707 aa16.32■□□□□ 0.2
SCARB2-221ENST00000640341 MAP2K7O14733 419 aa16.32■□□□□ 0.2
SCARB2-221ENST00000640341 PCP11498 1178 aaKnown RBP16.32■□□□□ 0.2
SCARB2-221ENST00000640341 C2orf54Q08AI8 447 aa16.32■□□□□ 0.2
SCARB2-221ENST00000640341 C12orf60Q5U649 245 aa16.32■□□□□ 0.2
SCARB2-221ENST00000640341 C2CD5Q86YS7 1000 aa16.32■□□□□ 0.2
SCARB2-221ENST00000640341 SMARCAL1Q9NZC9 954 aa16.32■□□□□ 0.2
SCARB2-221ENST00000640341 NFIXQ14938 502 aa16.31■□□□□ 0.2
SCARB2-221ENST00000640341 LRRC41Q15345 812 aa16.31■□□□□ 0.2
SCARB2-221ENST00000640341 HAUS4Q9H6D7 363 aa16.31■□□□□ 0.2
SCARB2-221ENST00000640341 LRWD1Q9UFC0 647 aa16.31■□□□□ 0.2
SCARB2-221ENST00000640341 MARCH6O60337 910 aa16.31■□□□□ 0.2
SCARB2-221ENST00000640341 FGRP09769 529 aa16.31■□□□□ 0.2
SCARB2-221ENST00000640341 CYLC1P35663 651 aaPredicted RBP16.31■□□□□ 0.2
SCARB2-221ENST00000640341 CDK5RAP3Q96JB5 506 aa16.31■□□□□ 0.2
SCARB2-221ENST00000640341 KLRC4O43908 158 aa16.31■□□□□ 0.2
SCARB2-221ENST00000640341 DNM2P50570 870 aa16.31■□□□□ 0.2
SCARB2-221ENST00000640341 CLEC10AQ8IUN9 316 aa16.31■□□□□ 0.2
SCARB2-221ENST00000640341 GOLGA6L1Q8N7Z2 621 aa16.31■□□□□ 0.2
SCARB2-221ENST00000640341 TBCKQ8TEA7 893 aa16.31■□□□□ 0.2
SCARB2-221ENST00000640341 UBXN6Q9BZV1 441 aa16.31■□□□□ 0.2
SCARB2-221ENST00000640341 SEC63Q9UGP8 760 aaKnown RBP16.31■□□□□ 0.2
SCARB2-221ENST00000640341 DUOX1Q9NRD9 1551 aa16.3■□□□□ 0.2
SCARB2-221ENST00000640341 MYH13Q9UKX3 1938 aa16.3■□□□□ 0.2
SCARB2-221ENST00000640341 OR52Z1P0C646 297 aa16.3■□□□□ 0.2
SCARB2-221ENST00000640341 PICALMQ13492 652 aa16.3■□□□□ 0.2
SCARB2-221ENST00000640341 SPA17Q15506 151 aa16.3■□□□□ 0.2
SCARB2-221ENST00000640341 TTI2Q6NXR4 508 aa16.3■□□□□ 0.2
SCARB2-221ENST00000640341 MSANTD4Q8NCY6 345 aa16.3■□□□□ 0.2
SCARB2-221ENST00000640341 P2RX5Q93086 422 aa16.3■□□□□ 0.2
SCARB2-221ENST00000640341 PIGSQ96S52 555 aa16.3■□□□□ 0.2
SCARB2-221ENST00000640341 KANSL2Q9H9L4 492 aa16.3■□□□□ 0.2
SCARB2-221ENST00000640341 TNKS1BP1Q9C0C2 1729 aaKnown RBP16.3■□□□□ 0.2
SCARB2-221ENST00000640341 FAM170AA1A519 330 aa16.3■□□□□ 0.2
SCARB2-221ENST00000640341 F8W031 263 aaPredicted RBP16.3■□□□□ 0.2
SCARB2-221ENST00000640341 STXBP3O00186 592 aa16.3■□□□□ 0.2
SCARB2-221ENST00000640341 EEF1GP26641 437 aaKnown RBP16.3■□□□□ 0.2
SCARB2-221ENST00000640341 KRT83P78385 493 aa16.3■□□□□ 0.2
SCARB2-221ENST00000640341 KIF5AQ12840 1032 aa16.3■□□□□ 0.2
SCARB2-221ENST00000640341 TPTE2Q6XPS3 522 aa16.3■□□□□ 0.2
SCARB2-221ENST00000640341 DGKHQ86XP1 1220 aa16.3■□□□□ 0.2
SCARB2-221ENST00000640341 POTEDQ86YR6 584 aa16.3■□□□□ 0.2
SCARB2-221ENST00000640341 DUSP9Q99956 384 aaKnown RBP16.3■□□□□ 0.2
SCARB2-221ENST00000640341 FAM204AQ9H8W3 233 aa16.3■□□□□ 0.2
SCARB2-221ENST00000640341 TBC1D7Q9P0N9 293 aa16.3■□□□□ 0.2
SCARB2-221ENST00000640341 TRIM66O15016 1216 aa16.29■□□□□ 0.2
SCARB2-221ENST00000640341 NONOQ15233 471 aaKnown RBP eCLIP16.29■□□□□ 0.2
SCARB2-221ENST00000640341 FOXR1Q6PIV2 292 aa16.29■□□□□ 0.2
SCARB2-221ENST00000640341 CCDC155Q8N6L0 562 aa16.29■□□□□ 0.2
SCARB2-221ENST00000640341 BBXQ8WY36 941 aaPredicted RBP16.29■□□□□ 0.2
SCARB2-221ENST00000640341 COA7Q96BR5 231 aa16.29■□□□□ 0.2
SCARB2-221ENST00000640341 EYA3Q99504 573 aa16.29■□□□□ 0.2
SCARB2-221ENST00000640341 TRIM9Q9C026 710 aa16.29■□□□□ 0.2
SCARB2-221ENST00000640341 GBP3Q9H0R5 595 aa16.29■□□□□ 0.2
SCARB2-221ENST00000640341 BARHL2Q9NY43 387 aa16.29■□□□□ 0.2
SCARB2-221ENST00000640341 LCMT1Q9UIC8 334 aa16.29■□□□□ 0.2
SCARB2-221ENST00000640341 RAB21Q9UL25 225 aa16.29■□□□□ 0.2
SCARB2-221ENST00000640341 CAPN11Q9UMQ6 739 aa16.29■□□□□ 0.2
SCARB2-221ENST00000640341 DISP2A7MBM2 1401 aa16.29■□□□□ 0.2
SCARB2-221ENST00000640341 AKR1B10O60218 316 aa16.29■□□□□ 0.2
SCARB2-221ENST00000640341 AMPD2Q01433 879 aa16.29■□□□□ 0.2
SCARB2-221ENST00000640341 PPARDQ03181 441 aa16.29■□□□□ 0.2
SCARB2-221ENST00000640341 ARID5AQ03989 594 aa16.29■□□□□ 0.2
SCARB2-221ENST00000640341 CLEC4GQ6UXB4 293 aa16.29■□□□□ 0.2
SCARB2-221ENST00000640341 GIMAP8Q8ND71 665 aaPredicted RBP16.29■□□□□ 0.2
SCARB2-221ENST00000640341 MLXIPQ9HAP2 919 aa16.29■□□□□ 0.2
SCARB2-221ENST00000640341 EHD2Q9NZN4 543 aa16.29■□□□□ 0.2
SCARB2-221ENST00000640341 TIAM2Q8IVF5 1701 aa16.29■□□□□ 0.2
SCARB2-221ENST00000640341 POTEMA6NI47 508 aa16.29■□□□□ 0.2
SCARB2-221ENST00000640341 BAG3O95817 575 aa16.29■□□□□ 0.2
SCARB2-221ENST00000640341 GNAQP50148 359 aa16.29■□□□□ 0.2
SCARB2-221ENST00000640341 SPATA31A1Q5TZJ5 1347 aa16.28■□□□□ 0.2
SCARB2-221ENST00000640341 RHOBTB3O94955 611 aa16.28■□□□□ 0.2
SCARB2-221ENST00000640341 SLC7A5Q01650 507 aa16.28■□□□□ 0.2
SCARB2-221ENST00000640341 GRM4Q14833 912 aa16.28■□□□□ 0.2
SCARB2-221ENST00000640341 ANKRD2Q9GZV1 360 aa16.28■□□□□ 0.2
SCARB2-221ENST00000640341 ZHX3Q9H4I2 956 aa16.28■□□□□ 0.2
SCARB2-221ENST00000640341 THAP9Q9H5L6 903 aa16.28■□□□□ 0.2
SCARB2-221ENST00000640341 KBTBD4Q9NVX7 518 aa16.28■□□□□ 0.2
SCARB2-221ENST00000640341 RSPH14Q9UHP6 348 aa16.28■□□□□ 0.2
SCARB2-221ENST00000640341 TDRD12Q587J7 1177 aaKnown RBP16.28■□□□□ 0.2
SCARB2-221ENST00000640341 DNAJC21Q5F1R6 531 aaKnown RBP16.28■□□□□ 0.2
SCARB2-221ENST00000640341 TRAPPC11Q7Z392 1133 aa16.28■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 124.9 ms