RNA–Protein interactions for RNA: ENST00000624160.1

AC004009.3-201, humanhuman

BASIC

Gene AC004009.3, Length 645 nt, Biotype TEC.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC004009.3-201ENST00000624160 PHTF2Q8N3S3 785 aa9.65□□□□□ -0.86
AC004009.3-201ENST00000624160 RNF166Q96A37 237 aaPredicted RBP9.65□□□□□ -0.86
AC004009.3-201ENST00000624160 CLIP2Q9UDT6 1046 aa9.65□□□□□ -0.86
AC004009.3-201ENST00000624160 KCNH4Q9UQ05 1017 aa9.65□□□□□ -0.86
AC004009.3-201ENST00000624160 TMX2Q9Y320 296 aa9.65□□□□□ -0.86
AC004009.3-201ENST00000624160 SNX14Q9Y5W7 946 aa9.65□□□□□ -0.86
AC004009.3-201ENST00000624160 OTOFQ9HC10 1997 aa9.64□□□□□ -0.87
AC004009.3-201ENST00000624160 TNKSO95271 1327 aa9.64□□□□□ -0.87
AC004009.3-201ENST00000624160 WDR33Q9C0J8 1336 aaKnown RBP9.64□□□□□ -0.87
AC004009.3-201ENST00000624160 CCL15-CCL14A0A0B4J2E2 113 aa9.64□□□□□ -0.87
AC004009.3-201ENST00000624160 CCDC69A6NI79 296 aa9.64□□□□□ -0.87
AC004009.3-201ENST00000624160 USP17L15C9J2P7 530 aa9.64□□□□□ -0.87
AC004009.3-201ENST00000624160 USP17L13C9JLJ4 530 aa9.64□□□□□ -0.87
AC004009.3-201ENST00000624160 USP17L11C9JVI0 530 aa9.64□□□□□ -0.87
AC004009.3-201ENST00000624160 USP17L18D6R9N7 530 aa9.64□□□□□ -0.87
AC004009.3-201ENST00000624160 USP17L22D6RA61 530 aa9.64□□□□□ -0.87
AC004009.3-201ENST00000624160 USP17L17D6RBQ6 530 aa9.64□□□□□ -0.87
AC004009.3-201ENST00000624160 USP17L19D6RCP7 530 aa9.64□□□□□ -0.87
AC004009.3-201ENST00000624160 USP17L20D6RJB6 530 aa9.64□□□□□ -0.87
AC004009.3-201ENST00000624160 PRC1O43663 620 aa9.64□□□□□ -0.87
AC004009.3-201ENST00000624160 CALM1P0DP23 149 aa9.64□□□□□ -0.87
AC004009.3-201ENST00000624160 CALM2P0DP24 149 aa9.64□□□□□ -0.87
AC004009.3-201ENST00000624160 CALM3P0DP25 149 aa9.64□□□□□ -0.87
AC004009.3-201ENST00000624160 CASTP20810 708 aaKnown RBP9.64□□□□□ -0.87
AC004009.3-201ENST00000624160 USP17L24Q0WX57 530 aa9.64□□□□□ -0.87
AC004009.3-201ENST00000624160 WTAPQ15007 396 aa9.64□□□□□ -0.87
AC004009.3-201ENST00000624160 CCL15Q16663 113 aa9.64□□□□□ -0.87
AC004009.3-201ENST00000624160 OXLD1Q5BKU9 147 aa9.64□□□□□ -0.87
AC004009.3-201ENST00000624160 CYP4F22Q6NT55 531 aa9.64□□□□□ -0.87
AC004009.3-201ENST00000624160 NFXL1Q6ZNB6 911 aa9.64□□□□□ -0.87
AC004009.3-201ENST00000624160 RUFY3Q7L099 469 aa9.64□□□□□ -0.87
AC004009.3-201ENST00000624160 CATIPQ7Z7H3 387 aa9.64□□□□□ -0.87
AC004009.3-201ENST00000624160 GMCL1P1Q8NEA9 526 aa9.64□□□□□ -0.87
AC004009.3-201ENST00000624160 FAM200AQ8TCP9 573 aa9.64□□□□□ -0.87
AC004009.3-201ENST00000624160 MKL1Q969V6 931 aa9.64□□□□□ -0.87
AC004009.3-201ENST00000624160 CHMP4CQ96CF2 233 aa9.64□□□□□ -0.87
AC004009.3-201ENST00000624160 ZCCHC17Q9NP64 241 aaKnown RBP9.64□□□□□ -0.87
AC004009.3-201ENST00000624160 SLC45A1Q9Y2W3 748 aa9.64□□□□□ -0.87
AC004009.3-201ENST00000624160 ATAD5Q96QE3 1844 aa9.63□□□□□ -0.87
AC004009.3-201ENST00000624160 IGKV6D-41A0A0C4DH26 115 aa9.63□□□□□ -0.87
AC004009.3-201ENST00000624160 A0A0G2JLL6 359 aaPredicted RBP9.63□□□□□ -0.87
AC004009.3-201ENST00000624160 SMIM22K7EJ46 135 aa9.63□□□□□ -0.87
AC004009.3-201ENST00000624160 WDR46O15213 610 aaKnown RBP9.63□□□□□ -0.87
AC004009.3-201ENST00000624160 SLURP2P0DP57 97 aa9.63□□□□□ -0.87
AC004009.3-201ENST00000624160 LIFRP42702 1097 aa9.63□□□□□ -0.87
AC004009.3-201ENST00000624160 RBM25P49756 843 aaKnown RBP9.63□□□□□ -0.87
AC004009.3-201ENST00000624160 HMGCS2P54868 508 aa9.63□□□□□ -0.87
AC004009.3-201ENST00000624160 MAP2K1Q02750 393 aaPredicted RBP9.63□□□□□ -0.87
AC004009.3-201ENST00000624160 RRP1BQ14684 758 aaKnown RBP9.63□□□□□ -0.87
AC004009.3-201ENST00000624160 RCSD1Q6JBY9 416 aa9.63□□□□□ -0.87
AC004009.3-201ENST00000624160 GADL1Q6ZQY3 521 aa9.63□□□□□ -0.87
AC004009.3-201ENST00000624160 PRRT2Q7Z6L0 340 aaPredicted RBP9.63□□□□□ -0.87
AC004009.3-201ENST00000624160 MB21D2Q8IYB1 491 aaPredicted RBP9.63□□□□□ -0.87
AC004009.3-201ENST00000624160 GTF3C2Q8WUA4 911 aaPredicted RBP9.63□□□□□ -0.87
AC004009.3-201ENST00000624160 ANKS1AQ92625 1134 aa9.63□□□□□ -0.87
AC004009.3-201ENST00000624160 C12orf42Q96LP6 360 aa9.63□□□□□ -0.87
AC004009.3-201ENST00000624160 GZF1Q9H116 711 aaPredicted RBP9.63□□□□□ -0.87
AC004009.3-201ENST00000624160 VCPKMTQ9H867 229 aa9.63□□□□□ -0.87
AC004009.3-201ENST00000624160 INCENPQ9NQS7 918 aa9.63□□□□□ -0.87
AC004009.3-201ENST00000624160 ISY1Q9ULR0 285 aaKnown RBP9.63□□□□□ -0.87
AC004009.3-201ENST00000624160 AGTPBP1Q9UPW5 1226 aa9.63□□□□□ -0.87
AC004009.3-201ENST00000624160 CCDC196A0A1B0GTZ2 297 aa9.62□□□□□ -0.87
AC004009.3-201ENST00000624160 CARNS1A5YM72 827 aa9.62□□□□□ -0.87
AC004009.3-201ENST00000624160 FAM155AB1AL88 458 aaPredicted RBP9.62□□□□□ -0.87
AC004009.3-201ENST00000624160 CA12O43570 354 aa9.62□□□□□ -0.87
AC004009.3-201ENST00000624160 RPS6KB1P23443 525 aa9.62□□□□□ -0.87
AC004009.3-201ENST00000624160 KIF5BP33176 963 aa9.62□□□□□ -0.87
AC004009.3-201ENST00000624160 GUCY1A2P33402 732 aa9.62□□□□□ -0.87
AC004009.3-201ENST00000624160 SLC1A4P43007 532 aa9.62□□□□□ -0.87
AC004009.3-201ENST00000624160 VEGFBP49765 207 aa9.62□□□□□ -0.87
AC004009.3-201ENST00000624160 SH3BP2P78314 561 aa9.62□□□□□ -0.87
AC004009.3-201ENST00000624160 IRX3P78415 501 aaPredicted RBP9.62□□□□□ -0.87
AC004009.3-201ENST00000624160 PPP2R5BQ15173 497 aa9.62□□□□□ -0.87
AC004009.3-201ENST00000624160 RABEP1Q15276 862 aa9.62□□□□□ -0.87
AC004009.3-201ENST00000624160 ZYXQ15942 572 aaKnown RBP9.62□□□□□ -0.87
AC004009.3-201ENST00000624160 GPATCH4Q5T3I0 446 aaKnown RBP9.62□□□□□ -0.87
AC004009.3-201ENST00000624160 TMCO4Q5TGY1 634 aa9.62□□□□□ -0.87
AC004009.3-201ENST00000624160 STOX1Q6ZVD7 989 aa9.62□□□□□ -0.87
AC004009.3-201ENST00000624160 ANKRD23Q86SG2 305 aa9.62□□□□□ -0.87
AC004009.3-201ENST00000624160 ENAHQ8N8S7 591 aaPredicted RBP9.62□□□□□ -0.87
AC004009.3-201ENST00000624160 ANKLE1Q8NAG6 615 aa9.62□□□□□ -0.87
AC004009.3-201ENST00000624160 SMCR8Q8TEV9 937 aaPredicted RBP9.62□□□□□ -0.87
AC004009.3-201ENST00000624160 DCAF4Q8WV16 495 aa9.62□□□□□ -0.87
AC004009.3-201ENST00000624160 IL17RAQ96F46 866 aa9.62□□□□□ -0.87
AC004009.3-201ENST00000624160 GMCL1Q96IK5 515 aa9.62□□□□□ -0.87
AC004009.3-201ENST00000624160 PARK7Q99497 189 aaKnown RBP9.62□□□□□ -0.87
AC004009.3-201ENST00000624160 ZKSCAN3Q9BRR0 538 aa9.62□□□□□ -0.87
AC004009.3-201ENST00000624160 IL17RBQ9NRM6 502 aa9.62□□□□□ -0.87
AC004009.3-201ENST00000624160 SLC12A7Q9Y666 1083 aa9.62□□□□□ -0.87
AC004009.3-201ENST00000624160 RNF223E7ERA6 249 aa9.61□□□□□ -0.87
AC004009.3-201ENST00000624160 F5H6K3 240 aa9.61□□□□□ -0.87
AC004009.3-201ENST00000624160 NMT2O60551 498 aa9.61□□□□□ -0.87
AC004009.3-201ENST00000624160 DDAH1O94760 285 aa9.61□□□□□ -0.87
AC004009.3-201ENST00000624160 TM4SF4P48230 202 aa9.61□□□□□ -0.87
AC004009.3-201ENST00000624160 NOVP48745 357 aa9.61□□□□□ -0.87
AC004009.3-201ENST00000624160 RCAN1P53805 252 aa9.61□□□□□ -0.87
AC004009.3-201ENST00000624160 JAG1P78504 1218 aa9.61□□□□□ -0.87
AC004009.3-201ENST00000624160 KIF23Q02241 960 aaPredicted RBP9.61□□□□□ -0.87
AC004009.3-201ENST00000624160 KLRC3Q07444 240 aa9.61□□□□□ -0.87
AC004009.3-201ENST00000624160 TRIM32Q13049 653 aa9.61□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms