RNA–Protein interactions for RNA: ENST00000614240.4

SMN2-213, Transcript of survival of motor neuron 2, centromeric, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SMN2, Length 804 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN2-213ENST00000614240 TLK2Q86UE8 772 aa21.11■□□□□ 0.97
SMN2-213ENST00000614240 FAM126BQ8IXS8 530 aa21.11■□□□□ 0.97
SMN2-213ENST00000614240 EVI5LQ96CN4 794 aa21.11■□□□□ 0.97
SMN2-213ENST00000614240 CTAGE5O15320 804 aa21.1■□□□□ 0.97
SMN2-213ENST00000614240 DYNC1LI2O43237 492 aaPredicted RBP21.1■□□□□ 0.97
SMN2-213ENST00000614240 CABYRO75952 493 aa21.1■□□□□ 0.97
SMN2-213ENST00000614240 FSCN1Q16658 493 aaKnown RBP21.1■□□□□ 0.97
SMN2-213ENST00000614240 MUM1L1Q5H9M0 696 aa21.1■□□□□ 0.97
SMN2-213ENST00000614240 RRP12Q5JTH9 1297 aaKnown RBP21.1■□□□□ 0.97
SMN2-213ENST00000614240 TIFAQ96CG3 184 aa21.1■□□□□ 0.97
SMN2-213ENST00000614240 CYP39A1Q9NYL5 469 aa21.1■□□□□ 0.97
SMN2-213ENST00000614240 ACRP10323 421 aa21.09■□□□□ 0.97
SMN2-213ENST00000614240 SMPD1P17405 629 aa21.09■□□□□ 0.97
SMN2-213ENST00000614240 NKX3-2P78367 333 aa21.09■□□□□ 0.97
SMN2-213ENST00000614240 GRIN2CQ14957 1233 aa21.09■□□□□ 0.97
SMN2-213ENST00000614240 TMEM240Q5SV17 173 aa21.09■□□□□ 0.97
SMN2-213ENST00000614240 VPS53Q5VIR6 699 aa21.09■□□□□ 0.97
SMN2-213ENST00000614240 IQSEC1Q6DN90 963 aa21.09■□□□□ 0.97
SMN2-213ENST00000614240 DCAF4Q8WV16 495 aa21.09■□□□□ 0.97
SMN2-213ENST00000614240 ZNF576Q9H609 170 aa21.09■□□□□ 0.97
SMN2-213ENST00000614240 HELLSQ9NRZ9 838 aa21.09■□□□□ 0.97
SMN2-213ENST00000614240 ANAPC4Q9UJX5 808 aa21.09■□□□□ 0.97
SMN2-213ENST00000614240 GNEQ9Y223 722 aaKnown RBP21.09■□□□□ 0.97
SMN2-213ENST00000614240 DDX49Q9Y6V7 483 aaKnown RBP21.09■□□□□ 0.97
SMN2-213ENST00000614240 ASTN1O14525 1302 aa21.08■□□□□ 0.97
SMN2-213ENST00000614240 FOXP2O15409 715 aa21.08■□□□□ 0.97
SMN2-213ENST00000614240 ORC4O43929 436 aa21.08■□□□□ 0.97
SMN2-213ENST00000614240 ICAM1P05362 532 aa21.08■□□□□ 0.97
SMN2-213ENST00000614240 CYP2C18P33260 490 aa21.08■□□□□ 0.97
SMN2-213ENST00000614240 ITGA7Q13683 1181 aa21.08■□□□□ 0.97
SMN2-213ENST00000614240 PSRC1Q6PGN9 363 aaPredicted RBP21.08■□□□□ 0.97
SMN2-213ENST00000614240 ZNF365Q70YC5 407 aa21.08■□□□□ 0.97
SMN2-213ENST00000614240 C16orf59Q7L2K0 433 aa21.08■□□□□ 0.97
SMN2-213ENST00000614240 RASGRP2Q7LDG7 609 aa21.08■□□□□ 0.97
SMN2-213ENST00000614240 FBXO16Q8IX29 292 aaPredicted RBP21.08■□□□□ 0.97
SMN2-213ENST00000614240 PDGFCQ9NRA1 345 aa21.08■□□□□ 0.97
SMN2-213ENST00000614240 MCM3APO60318 1980 aa21.08■□□□□ 0.96
SMN2-213ENST00000614240 SLC16A2P36021 539 aa21.07■□□□□ 0.96
SMN2-213ENST00000614240 TTBK2Q6IQ55 1244 aa21.07■□□□□ 0.96
SMN2-213ENST00000614240 KIAA1211Q6ZU35 1233 aa21.07■□□□□ 0.96
SMN2-213ENST00000614240 HIPK3Q9H422 1215 aa21.07■□□□□ 0.96
SMN2-213ENST00000614240 GRXCR1A8MXD5 290 aa21.06■□□□□ 0.96
SMN2-213ENST00000614240 CD4P01730 458 aa21.06■□□□□ 0.96
SMN2-213ENST00000614240 ALX1Q15699 326 aa21.06■□□□□ 0.96
SMN2-213ENST00000614240 SYDE2Q5VT97 1194 aa21.06■□□□□ 0.96
SMN2-213ENST00000614240 MTIF3Q9H2K0 278 aaKnown RBP21.06■□□□□ 0.96
SMN2-213ENST00000614240 VTA1Q9NP79 307 aa21.06■□□□□ 0.96
SMN2-213ENST00000614240 GPCPD1Q9NPB8 672 aa21.06■□□□□ 0.96
SMN2-213ENST00000614240 IL23AQ9NPF7 189 aa21.06■□□□□ 0.96
SMN2-213ENST00000614240 ADD3Q9UEY8 706 aaKnown RBP21.06■□□□□ 0.96
SMN2-213ENST00000614240 Q9Y3F1 56 aa21.06■□□□□ 0.96
SMN2-213ENST00000614240 FRMPD2Q68DX3 1309 aaPredicted RBP21.05■□□□□ 0.96
SMN2-213ENST00000614240 A0A0C4DFX4 3053 aa21.05■□□□□ 0.96
SMN2-213ENST00000614240 PTPDC1A2A3K4 754 aa21.05■□□□□ 0.96
SMN2-213ENST00000614240 TOP1P11387 765 aaKnown RBP21.05■□□□□ 0.96
SMN2-213ENST00000614240 PTGS1P23219 599 aa21.05■□□□□ 0.96
SMN2-213ENST00000614240 BAATQ14032 418 aaPredicted RBP21.05■□□□□ 0.96
SMN2-213ENST00000614240 MCMDC2Q4G0Z9 681 aa21.05■□□□□ 0.96
SMN2-213ENST00000614240 TAPT1Q6NXT6 567 aa21.05■□□□□ 0.96
SMN2-213ENST00000614240 PURBQ96QR8 312 aaKnown RBP21.05■□□□□ 0.96
SMN2-213ENST00000614240 SEZ6LQ9BYH1 1024 aa21.05■□□□□ 0.96
SMN2-213ENST00000614240 RANBP17Q9H2T7 1088 aaKnown RBP21.05■□□□□ 0.96
SMN2-213ENST00000614240 SALL3Q9BXA9 1300 aa21.04■□□□□ 0.96
SMN2-213ENST00000614240 FGAP02671 866 aa21.04■□□□□ 0.96
SMN2-213ENST00000614240 FGBP02675 491 aa21.04■□□□□ 0.96
SMN2-213ENST00000614240 PBX2P40425 430 aa21.04■□□□□ 0.96
SMN2-213ENST00000614240 PDE1AP54750 535 aa21.04■□□□□ 0.96
SMN2-213ENST00000614240 RRP1P56182 461 aaKnown RBP21.04■□□□□ 0.96
SMN2-213ENST00000614240 PSMC6P62333 389 aa21.04■□□□□ 0.96
SMN2-213ENST00000614240 SLC43A3Q8NBI5 491 aa21.04■□□□□ 0.96
SMN2-213ENST00000614240 FAM227BQ96M60 508 aa21.04■□□□□ 0.96
SMN2-213ENST00000614240 GAS2L1Q99501 681 aaPredicted RBP21.04■□□□□ 0.96
SMN2-213ENST00000614240 TMEM47Q9BQJ4 181 aa21.04■□□□□ 0.96
SMN2-213ENST00000614240 PBX4Q9BYU1 374 aa21.04■□□□□ 0.96
SMN2-213ENST00000614240 MSRAQ9UJ68 235 aa21.04■□□□□ 0.96
SMN2-213ENST00000614240 FGRP09769 529 aa21.03■□□□□ 0.96
SMN2-213ENST00000614240 NOVP48745 357 aa21.03■□□□□ 0.96
SMN2-213ENST00000614240 CCL23P55773 120 aa21.03■□□□□ 0.96
SMN2-213ENST00000614240 RASIP1Q5U651 963 aa21.03■□□□□ 0.96
SMN2-213ENST00000614240 BTNL9Q6UXG8 535 aa21.03■□□□□ 0.96
SMN2-213ENST00000614240 CRBNQ96SW2 442 aa21.03■□□□□ 0.96
SMN2-213ENST00000614240 TRPV6Q9H1D0 765 aa21.03■□□□□ 0.96
SMN2-213ENST00000614240 A0A0D9SFI3 127 aa21.02■□□□□ 0.96
SMN2-213ENST00000614240 TRIM6-TRIM34B2RNG4 842 aa21.02■□□□□ 0.96
SMN2-213ENST00000614240 CALML3P27482 149 aa21.02■□□□□ 0.96
SMN2-213ENST00000614240 ALDH5A1P51649 535 aaPredicted RBP21.02■□□□□ 0.96
SMN2-213ENST00000614240 HAND2P61296 217 aa21.02■□□□□ 0.96
SMN2-213ENST00000614240 RAB30Q15771 203 aa21.02■□□□□ 0.96
SMN2-213ENST00000614240 DUSP28Q4G0W2 176 aa21.02■□□□□ 0.96
SMN2-213ENST00000614240 TMEM63BQ5T3F8 832 aa21.02■□□□□ 0.96
SMN2-213ENST00000614240 MORC4Q8TE76 937 aa21.02■□□□□ 0.96
SMN2-213ENST00000614240 PPM1EQ8WY54 764 aa21.02■□□□□ 0.96
SMN2-213ENST00000614240 HERVK_113Q902F9 699 aa21.02■□□□□ 0.96
SMN2-213ENST00000614240 SYMPKQ92797 1274 aaKnown RBP21.02■□□□□ 0.96
SMN2-213ENST00000614240 WDR11Q9BZH6 1224 aa21.02■□□□□ 0.96
SMN2-213ENST00000614240 GPHNQ9NQX3 736 aaPredicted RBP21.02■□□□□ 0.96
SMN2-213ENST00000614240 TCP11L1Q9NUJ3 509 aa21.02■□□□□ 0.96
SMN2-213ENST00000614240 PNMA2Q9UL42 364 aa21.02■□□□□ 0.96
SMN2-213ENST00000614240 GRIN2DO15399 1336 aa21.02■□□□□ 0.95
SMN2-213ENST00000614240 UMODL1Q5DID0 1318 aa21.02■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms