RNA–Protein interactions for RNA: ENST00000610556.4

SYNPO2-206, Transcript of synaptopodin 2, humanhuman

TSL 1 (best) BASIC

Gene SYNPO2, Length 3,934 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2-206ENST00000610556 KLHL30Q0D2K2 578 aa7.62□□□□□ -1.19
SYNPO2-206ENST00000610556 EARS2Q5JPH6 523 aaKnown RBP7.62□□□□□ -1.19
SYNPO2-206ENST00000610556 KRT26Q7Z3Y9 468 aa7.62□□□□□ -1.19
SYNPO2-206ENST00000610556 SYCP3Q8IZU3 236 aa7.62□□□□□ -1.19
SYNPO2-206ENST00000610556 GPATCH11Q8N954 259 aa7.62□□□□□ -1.19
SYNPO2-206ENST00000610556 CNBD1Q8NA66 436 aa7.62□□□□□ -1.19
SYNPO2-206ENST00000610556 TRIM58Q8NG06 486 aa7.62□□□□□ -1.19
SYNPO2-206ENST00000610556 GOLGA5Q8TBA6 731 aa7.62□□□□□ -1.19
SYNPO2-206ENST00000610556 COA7Q96BR5 231 aa7.62□□□□□ -1.19
SYNPO2-206ENST00000610556 A0A0U1RQJ8 604 aa7.62□□□□□ -1.19
SYNPO2-206ENST00000610556 EEF1GP26641 437 aaKnown RBP7.62□□□□□ -1.19
SYNPO2-206ENST00000610556 MRPL12P52815 198 aaKnown RBP7.62□□□□□ -1.19
SYNPO2-206ENST00000610556 POLR2FP61218 127 aaKnown RBP7.62□□□□□ -1.19
SYNPO2-206ENST00000610556 MFSD14BQ5SR56 506 aa7.62□□□□□ -1.19
SYNPO2-206ENST00000610556 CCDC65Q8IXS2 484 aa7.62□□□□□ -1.19
SYNPO2-206ENST00000610556 FAM71BQ8TC56 605 aa7.62□□□□□ -1.19
SYNPO2-206ENST00000610556 NBPF3Q9H094 633 aa7.62□□□□□ -1.19
SYNPO2-206ENST00000610556 CCNL1Q9UK58 526 aaPredicted RBP7.62□□□□□ -1.19
SYNPO2-206ENST00000610556 USP54Q70EL1 1684 aa7.62□□□□□ -1.19
SYNPO2-206ENST00000610556 ZNF335Q9H4Z2 1342 aaPredicted RBP7.62□□□□□ -1.19
SYNPO2-206ENST00000610556 TMEM110-MUSTN1A8MSY1 372 aa7.62□□□□□ -1.19
SYNPO2-206ENST00000610556 DPYDQ12882 1025 aa7.62□□□□□ -1.19
SYNPO2-206ENST00000610556 LRP10Q7Z4F1 713 aa7.62□□□□□ -1.19
SYNPO2-206ENST00000610556 OTUD6BQ8N6M0 293 aa7.62□□□□□ -1.19
SYNPO2-206ENST00000610556 NOA1Q8NC60 698 aaKnown RBP7.62□□□□□ -1.19
SYNPO2-206ENST00000610556 EXOC4Q96A65 974 aa7.62□□□□□ -1.19
SYNPO2-206ENST00000610556 PIGSQ96S52 555 aa7.62□□□□□ -1.19
SYNPO2-206ENST00000610556 LSM14BQ9BX40 385 aaKnown RBP7.62□□□□□ -1.19
SYNPO2-206ENST00000610556 RRP15Q9Y3B9 282 aaKnown RBP7.62□□□□□ -1.19
SYNPO2-206ENST00000610556 TNS3Q68CZ2 1445 aa7.61□□□□□ -1.19
SYNPO2-206ENST00000610556 GOLGA6L7A0A1B0GV03 622 aa7.61□□□□□ -1.19
SYNPO2-206ENST00000610556 WTIPA6NIX2 430 aaPredicted RBP7.61□□□□□ -1.19
SYNPO2-206ENST00000610556 N4BP1O75113 896 aaKnown RBP7.61□□□□□ -1.19
SYNPO2-206ENST00000610556 TBC1D8O95759 1140 aa7.61□□□□□ -1.19
SYNPO2-206ENST00000610556 PLCG2P16885 1265 aa7.61□□□□□ -1.19
SYNPO2-206ENST00000610556 CYP2C19P33261 490 aa7.61□□□□□ -1.19
SYNPO2-206ENST00000610556 EIF4A3P38919 411 aaKnown RBP7.61□□□□□ -1.19
SYNPO2-206ENST00000610556 BTDP43251 543 aa7.61□□□□□ -1.19
SYNPO2-206ENST00000610556 CCT5P48643 541 aa7.61□□□□□ -1.19
SYNPO2-206ENST00000610556 GTF2A1P52655 376 aaPredicted RBP7.61□□□□□ -1.19
SYNPO2-206ENST00000610556 GNGT1P63211 74 aa7.61□□□□□ -1.19
SYNPO2-206ENST00000610556 ATP2C1P98194 919 aaPredicted RBP7.61□□□□□ -1.19
SYNPO2-206ENST00000610556 EHHADHQ08426 723 aa7.61□□□□□ -1.19
SYNPO2-206ENST00000610556 TCP10Q12799 353 aa7.61□□□□□ -1.19
SYNPO2-206ENST00000610556 PFKFB3Q16875 520 aaPredicted RBP7.61□□□□□ -1.19
SYNPO2-206ENST00000610556 BCAS4Q8TDM0 211 aa7.61□□□□□ -1.19
SYNPO2-206ENST00000610556 DYDC1Q8WWB3 177 aa7.61□□□□□ -1.19
SYNPO2-206ENST00000610556 FAM84BQ96KN1 310 aaPredicted RBP7.61□□□□□ -1.19
SYNPO2-206ENST00000610556 PHF20Q9BVI0 1012 aa7.61□□□□□ -1.19
SYNPO2-206ENST00000610556 ZC3H12CQ9C0D7 883 aaKnown RBP7.61□□□□□ -1.19
SYNPO2-206ENST00000610556 LGALS16A8MUM7 142 aa7.61□□□□□ -1.19
SYNPO2-206ENST00000610556 CETN3O15182 167 aa7.61□□□□□ -1.19
SYNPO2-206ENST00000610556 ZNF185O15231 689 aa7.61□□□□□ -1.19
SYNPO2-206ENST00000610556 CHMP2AO43633 222 aa7.61□□□□□ -1.19
SYNPO2-206ENST00000610556 ATP1A1P05023 1023 aaKnown RBP7.61□□□□□ -1.19
SYNPO2-206ENST00000610556 CCNE1P24864 410 aa7.61□□□□□ -1.19
SYNPO2-206ENST00000610556 TXNRD1Q16881 649 aa7.61□□□□□ -1.19
SYNPO2-206ENST00000610556 SFMBT2Q5VUG0 894 aa7.61□□□□□ -1.19
SYNPO2-206ENST00000610556 HOMEZQ8IX15 550 aa7.61□□□□□ -1.19
SYNPO2-206ENST00000610556 ERMNQ8TAM6 284 aa7.61□□□□□ -1.19
SYNPO2-206ENST00000610556 UBLCP1Q8WVY7 318 aaPredicted RBP7.61□□□□□ -1.19
SYNPO2-206ENST00000610556 RIN2Q8WYP3 895 aaPredicted RBP7.61□□□□□ -1.19
SYNPO2-206ENST00000610556 CUL5Q93034 780 aa7.61□□□□□ -1.19
SYNPO2-206ENST00000610556 SELENOOQ9BVL4 669 aa7.61□□□□□ -1.19
SYNPO2-206ENST00000610556 BRIP1Q9BX63 1249 aa7.61□□□□□ -1.19
SYNPO2-206ENST00000610556 UTP3Q9NQZ2 479 aaKnown RBP eCLIP7.61□□□□□ -1.19
SYNPO2-206ENST00000610556 INTS13Q9NVM9 706 aa7.61□□□□□ -1.19
SYNPO2-206ENST00000610556 MYO1AQ9UBC5 1043 aa7.61□□□□□ -1.19
SYNPO2-206ENST00000610556 PNPLA7Q6ZV29 1317 aa7.61□□□□□ -1.19
SYNPO2-206ENST00000610556 KCNQ2O43526 872 aa7.61□□□□□ -1.19
SYNPO2-206ENST00000610556 FCER1AP12319 257 aa7.61□□□□□ -1.19
SYNPO2-206ENST00000610556 SLC16A2P36021 539 aa7.61□□□□□ -1.19
SYNPO2-206ENST00000610556 PPP1R2P41236 205 aa7.61□□□□□ -1.19
SYNPO2-206ENST00000610556 LIG3P49916 1009 aa7.61□□□□□ -1.19
SYNPO2-206ENST00000610556 GTF2IP78347 998 aa7.61□□□□□ -1.19
SYNPO2-206ENST00000610556 ZBED6P86452 979 aa7.61□□□□□ -1.19
SYNPO2-206ENST00000610556 KIAA0753Q2KHM9 967 aa7.61□□□□□ -1.19
SYNPO2-206ENST00000610556 CFAP221Q4G0U5 840 aa7.61□□□□□ -1.19
SYNPO2-206ENST00000610556 MYOCDQ8IZQ8 938 aa7.61□□□□□ -1.19
SYNPO2-206ENST00000610556 ZNF622Q969S3 477 aaKnown RBP eCLIP7.61□□□□□ -1.19
SYNPO2-206ENST00000610556 DHTKD1Q96HY7 919 aaPredicted RBP7.61□□□□□ -1.19
SYNPO2-206ENST00000610556 KANSL2Q9H9L4 492 aa7.61□□□□□ -1.19
SYNPO2-206ENST00000610556 MLXIPQ9HAP2 919 aa7.61□□□□□ -1.19
SYNPO2-206ENST00000610556 MED4Q9NPJ6 270 aa7.61□□□□□ -1.19
SYNPO2-206ENST00000610556 AGPAT5Q9NUQ2 364 aa7.61□□□□□ -1.19
SYNPO2-206ENST00000610556 PCDHA12Q9UN75 941 aa7.61□□□□□ -1.19
SYNPO2-206ENST00000610556 SAMM50Q9Y512 469 aa7.61□□□□□ -1.19
SYNPO2-206ENST00000610556 A0A087X0B3 334 aa7.6□□□□□ -1.19
SYNPO2-206ENST00000610556 SPDYE3A6NKU9 549 aa7.6□□□□□ -1.19
SYNPO2-206ENST00000610556 PPP1R3GB7ZBB8 358 aa7.6□□□□□ -1.19
SYNPO2-206ENST00000610556 SEMA3EO15041 775 aa7.6□□□□□ -1.19
SYNPO2-206ENST00000610556 FTCDO95954 541 aa7.6□□□□□ -1.19
SYNPO2-206ENST00000610556 PCP11498 1178 aaKnown RBP7.6□□□□□ -1.19
SYNPO2-206ENST00000610556 KRT13P13646 458 aa7.6□□□□□ -1.19
SYNPO2-206ENST00000610556 TNNC1P63316 161 aa7.6□□□□□ -1.19
SYNPO2-206ENST00000610556 GUCY2DQ02846 1103 aa7.6□□□□□ -1.19
SYNPO2-206ENST00000610556 ASIC2Q16515 512 aa7.6□□□□□ -1.19
SYNPO2-206ENST00000610556 USH1GQ495M9 461 aa7.6□□□□□ -1.19
SYNPO2-206ENST00000610556 TRAPPC3LQ5T215 181 aa7.6□□□□□ -1.19
SYNPO2-206ENST00000610556 ADGRA1Q86SQ6 560 aa7.6□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 82.7 ms