RNA–Protein interactions for RNA: ENST00000602959.5

UBE2E3-213, Transcript of ubiquitin conjugating enzyme E2 E3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene UBE2E3, Length 909 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2E3-213ENST00000602959 CNPY2Q9Y2B0 182 aa28.23■■■□□ 2.11
UBE2E3-213ENST00000602959 LRRC37A2A6NM11 1700 aa28.23■■■□□ 2.11
UBE2E3-213ENST00000602959 NFIBO00712 420 aa28.22■■■□□ 2.11
UBE2E3-213ENST00000602959 SH2B2O14492 632 aaPredicted RBP28.22■■■□□ 2.11
UBE2E3-213ENST00000602959 SNAI1O95863 264 aaPredicted RBP28.22■■■□□ 2.11
UBE2E3-213ENST00000602959 ZNF865P0CJ78 1059 aaPredicted RBP28.22■■■□□ 2.11
UBE2E3-213ENST00000602959 NSMFQ6X4W1 530 aa28.22■■■□□ 2.11
UBE2E3-213ENST00000602959 CATIPQ7Z7H3 387 aa28.22■■■□□ 2.11
UBE2E3-213ENST00000602959 ALPK3Q96L96 1907 aa28.22■■■□□ 2.11
UBE2E3-213ENST00000602959 RASEFQ8IZ41 740 aa28.21■■■□□ 2.11
UBE2E3-213ENST00000602959 GPHNQ9NQX3 736 aaPredicted RBP28.21■■■□□ 2.11
UBE2E3-213ENST00000602959 SOWAHBA6NEL2 793 aa28.2■■■□□ 2.1
UBE2E3-213ENST00000602959 DHX16O60231 1041 aaKnown RBP28.2■■■□□ 2.1
UBE2E3-213ENST00000602959 REC8O95072 547 aa28.2■■■□□ 2.1
UBE2E3-213ENST00000602959 LIFRP42702 1097 aa28.2■■■□□ 2.1
UBE2E3-213ENST00000602959 QRICH1Q2TAL8 776 aa28.2■■■□□ 2.1
UBE2E3-213ENST00000602959 PRPF38BQ5VTL8 546 aaKnown RBP28.2■■■□□ 2.1
UBE2E3-213ENST00000602959 ARMCX2Q7L311 632 aa28.2■■■□□ 2.1
UBE2E3-213ENST00000602959 TMTC2Q8N394 836 aa28.2■■■□□ 2.1
UBE2E3-213ENST00000602959 KCNB2Q92953 911 aa28.2■■■□□ 2.1
UBE2E3-213ENST00000602959 MTMR8Q96EF0 704 aa28.2■■■□□ 2.1
UBE2E3-213ENST00000602959 MAP3K14Q99558 947 aa28.2■■■□□ 2.1
UBE2E3-213ENST00000602959 CDKN2AIPQ9NXV6 580 aaPredicted RBP28.2■■■□□ 2.1
UBE2E3-213ENST00000602959 ASTN1O14525 1302 aa28.19■■■□□ 2.1
UBE2E3-213ENST00000602959 BAZ2BQ9UIF8 2168 aaKnown RBP28.19■■■□□ 2.1
UBE2E3-213ENST00000602959 DDAH1O94760 285 aa28.19■■■□□ 2.1
UBE2E3-213ENST00000602959 KRT32Q14532 448 aa28.19■■■□□ 2.1
UBE2E3-213ENST00000602959 USH1GQ495M9 461 aa28.19■■■□□ 2.1
UBE2E3-213ENST00000602959 CCDC144CPQ8IYA2 1237 aa28.19■■■□□ 2.1
UBE2E3-213ENST00000602959 ZNF654Q8IZM8 581 aa28.19■■■□□ 2.1
UBE2E3-213ENST00000602959 NEK1Q96PY6 1258 aa28.19■■■□□ 2.1
UBE2E3-213ENST00000602959 ABCB11O95342 1321 aa28.18■■■□□ 2.1
UBE2E3-213ENST00000602959 COL6A1P12109 1028 aa28.18■■■□□ 2.1
UBE2E3-213ENST00000602959 AKR1A1P14550 325 aa28.18■■■□□ 2.1
UBE2E3-213ENST00000602959 BAATQ14032 418 aaPredicted RBP28.18■■■□□ 2.1
UBE2E3-213ENST00000602959 MAF1Q9H063 256 aa28.18■■■□□ 2.1
UBE2E3-213ENST00000602959 ABHD16BQ9H3Z7 469 aa28.18■■■□□ 2.1
UBE2E3-213ENST00000602959 C11orf49Q9H6J7 331 aa28.18■■■□□ 2.1
UBE2E3-213ENST00000602959 VAT1LQ9HCJ6 419 aa28.18■■■□□ 2.1
UBE2E3-213ENST00000602959 ASB14A6NK59 587 aa28.17■■■□□ 2.1
UBE2E3-213ENST00000602959 HSPA4P34932 840 aa28.17■■■□□ 2.1
UBE2E3-213ENST00000602959 SLC35G1Q2M3R5 365 aa28.17■■■□□ 2.1
UBE2E3-213ENST00000602959 ADCK5Q3MIX3 580 aa28.17■■■□□ 2.1
UBE2E3-213ENST00000602959 ANO1Q5XXA6 986 aa28.17■■■□□ 2.1
UBE2E3-213ENST00000602959 RNF207Q6ZRF8 634 aa28.17■■■□□ 2.1
UBE2E3-213ENST00000602959 FBXO11Q86XK2 927 aa28.17■■■□□ 2.1
UBE2E3-213ENST00000602959 RGS22Q8NE09 1264 aa28.17■■■□□ 2.1
UBE2E3-213ENST00000602959 KATNBL1Q9H079 304 aa28.17■■■□□ 2.1
UBE2E3-213ENST00000602959 RIOX1Q9H6W3 641 aa28.17■■■□□ 2.1
UBE2E3-213ENST00000602959 PTPDC1A2A3K4 754 aa28.16■■■□□ 2.1
UBE2E3-213ENST00000602959 DNM1LO00429 736 aa28.16■■■□□ 2.1
UBE2E3-213ENST00000602959 EPB41L2O43491 1005 aaKnown RBP28.16■■■□□ 2.1
UBE2E3-213ENST00000602959 ACVR2BQ13705 512 aa28.16■■■□□ 2.1
UBE2E3-213ENST00000602959 SLC30A10Q6XR72 485 aa28.16■■■□□ 2.1
UBE2E3-213ENST00000602959 SGMS1Q86VZ5 419 aa28.16■■■□□ 2.1
UBE2E3-213ENST00000602959 ADD3Q9UEY8 706 aaKnown RBP28.16■■■□□ 2.1
UBE2E3-213ENST00000602959 ZHX1Q9UKY1 873 aaPredicted RBP28.16■■■□□ 2.1
UBE2E3-213ENST00000602959 LOC102724159A0A0B4J2E5 919 aa28.15■■■□□ 2.1
UBE2E3-213ENST00000602959 CCDC69A6NI79 296 aa28.15■■■□□ 2.1
UBE2E3-213ENST00000602959 ZBTB5O15062 677 aa28.15■■■□□ 2.1
UBE2E3-213ENST00000602959 RARBP10826 455 aa28.15■■■□□ 2.1
UBE2E3-213ENST00000602959 RPS6P62753 249 aaKnown RBP28.15■■■□□ 2.1
UBE2E3-213ENST00000602959 EXOSC10Q01780 885 aaKnown RBP28.15■■■□□ 2.1
UBE2E3-213ENST00000602959 PWP2Q15269 919 aaKnown RBP28.15■■■□□ 2.1
UBE2E3-213ENST00000602959 NFXL1Q6ZNB6 911 aa28.15■■■□□ 2.1
UBE2E3-213ENST00000602959 ARRDC4Q8NCT1 418 aa28.15■■■□□ 2.1
UBE2E3-213ENST00000602959 MORC4Q8TE76 937 aa28.15■■■□□ 2.1
UBE2E3-213ENST00000602959 NUP133Q8WUM0 1156 aa28.15■■■□□ 2.1
UBE2E3-213ENST00000602959 MYL10Q9BUA6 226 aa28.15■■■□□ 2.1
UBE2E3-213ENST00000602959 LRRC2Q9BYS8 371 aa28.15■■■□□ 2.1
UBE2E3-213ENST00000602959 CYTH3O43739 400 aa28.14■■■□□ 2.1
UBE2E3-213ENST00000602959 DHX32Q7L7V1 743 aaKnown RBP28.14■■■□□ 2.1
UBE2E3-213ENST00000602959 CTCFLQ8NI51 663 aaPredicted RBP28.14■■■□□ 2.1
UBE2E3-213ENST00000602959 PURBQ96QR8 312 aaKnown RBP28.14■■■□□ 2.1
UBE2E3-213ENST00000602959 AMNQ9BXJ7 453 aa28.14■■■□□ 2.1
UBE2E3-213ENST00000602959 FAM184BQ9ULE4 1060 aa28.14■■■□□ 2.1
UBE2E3-213ENST00000602959 KIF5BP33176 963 aa28.13■■■□□ 2.09
UBE2E3-213ENST00000602959 DPF3Q92784 378 aa28.13■■■□□ 2.09
UBE2E3-213ENST00000602959 XPNPEP3Q9NQH7 507 aa28.13■■■□□ 2.09
UBE2E3-213ENST00000602959 MRPL11Q9Y3B7 192 aaKnown RBP28.13■■■□□ 2.09
UBE2E3-213ENST00000602959 PPP1R11O60927 126 aaPredicted RBP28.12■■■□□ 2.09
UBE2E3-213ENST00000602959 HMGB1P09429 215 aaKnown RBP28.12■■■□□ 2.09
UBE2E3-213ENST00000602959 CALM1P0DP23 149 aa28.12■■■□□ 2.09
UBE2E3-213ENST00000602959 CALM2P0DP24 149 aa28.12■■■□□ 2.09
UBE2E3-213ENST00000602959 CALM3P0DP25 149 aa28.12■■■□□ 2.09
UBE2E3-213ENST00000602959 CALML3P27482 149 aa28.12■■■□□ 2.09
UBE2E3-213ENST00000602959 ALDH5A1P51649 535 aaPredicted RBP28.12■■■□□ 2.09
UBE2E3-213ENST00000602959 SPZ1Q9BXG8 430 aa28.12■■■□□ 2.09
UBE2E3-213ENST00000602959 SNX14Q9Y5W7 946 aa28.12■■■□□ 2.09
UBE2E3-213ENST00000602959 SLC12A7Q9Y666 1083 aa28.12■■■□□ 2.09
UBE2E3-213ENST00000602959 SMARCA1P28370 1054 aa28.11■■■□□ 2.09
UBE2E3-213ENST00000602959 LRRC41Q15345 812 aa28.11■■■□□ 2.09
UBE2E3-213ENST00000602959 CCDC144BQ3MJ40 725 aa28.11■■■□□ 2.09
UBE2E3-213ENST00000602959 GJC2Q5T442 439 aaPredicted RBP28.11■■■□□ 2.09
UBE2E3-213ENST00000602959 MCF2L2Q86YR7 1114 aa28.11■■■□□ 2.09
UBE2E3-213ENST00000602959 DNERQ8NFT8 737 aa28.11■■■□□ 2.09
UBE2E3-213ENST00000602959 LENG1Q96BZ8 264 aaPredicted RBP28.11■■■□□ 2.09
UBE2E3-213ENST00000602959 PIGSQ96S52 555 aa28.11■■■□□ 2.09
UBE2E3-213ENST00000602959 LZTS2Q9BRK4 669 aa28.11■■■□□ 2.09
UBE2E3-213ENST00000602959 KBTBD13C9JR72 458 aa28.1■■■□□ 2.09
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms