RNA–Protein interactions for RNA: ENST00000597453.1

TGFB1-202, Transcript of transforming growth factor beta 1, humanhuman

TSL 1 (best)

Gene TGFB1, Length 392 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFB1-202ENST00000597453 RANBP17Q9H2T7 1088 aaKnown RBP17.87■□□□□ 0.45
TGFB1-202ENST00000597453 OSBPL3Q9H4L5 887 aa17.87■□□□□ 0.45
TGFB1-202ENST00000597453 TCP11L1Q9NUJ3 509 aa17.87■□□□□ 0.45
TGFB1-202ENST00000597453 CYP39A1Q9NYL5 469 aa17.87■□□□□ 0.45
TGFB1-202ENST00000597453 CCPG1Q9ULG6 757 aa17.87■□□□□ 0.45
TGFB1-202ENST00000597453 CDH23Q9H251 3354 aa17.87■□□□□ 0.45
TGFB1-202ENST00000597453 ICAM1P05362 532 aa17.86■□□□□ 0.45
TGFB1-202ENST00000597453 ASGR1P07306 291 aa17.86■□□□□ 0.45
TGFB1-202ENST00000597453 PTGS1P23219 599 aa17.86■□□□□ 0.45
TGFB1-202ENST00000597453 EPHB4P54760 987 aa17.86■□□□□ 0.45
TGFB1-202ENST00000597453 FAAP100Q0VG06 881 aa17.86■□□□□ 0.45
TGFB1-202ENST00000597453 AKNAD1Q5T1N1 836 aa17.86■□□□□ 0.45
TGFB1-202ENST00000597453 BTNL9Q6UXG8 535 aa17.86■□□□□ 0.45
TGFB1-202ENST00000597453 ANKRD33Q7Z3H0 272 aa17.86■□□□□ 0.45
TGFB1-202ENST00000597453 PURBQ96QR8 312 aaKnown RBP17.86■□□□□ 0.45
TGFB1-202ENST00000597453 GPCPD1Q9NPB8 672 aa17.86■□□□□ 0.45
TGFB1-202ENST00000597453 PDHBP11177 359 aa17.85■□□□□ 0.45
TGFB1-202ENST00000597453 NEDD4P46934 1319 aa17.85■□□□□ 0.45
TGFB1-202ENST00000597453 SYDE2Q5VT97 1194 aa17.85■□□□□ 0.45
TGFB1-202ENST00000597453 NSMFQ6X4W1 530 aa17.85■□□□□ 0.45
TGFB1-202ENST00000597453 GLT1D1Q96MS3 346 aa17.85■□□□□ 0.45
TGFB1-202ENST00000597453 TOX2Q96NM4 488 aa17.85■□□□□ 0.45
TGFB1-202ENST00000597453 SPC25Q9HBM1 224 aa17.85■□□□□ 0.45
TGFB1-202ENST00000597453 TMEM39AQ9NV64 488 aa17.85■□□□□ 0.45
TGFB1-202ENST00000597453 STXBP5LQ9Y2K9 1186 aa17.85■□□□□ 0.45
TGFB1-202ENST00000597453 ELP1O95163 1332 aa17.84■□□□□ 0.45
TGFB1-202ENST00000597453 ASB14A6NK59 587 aa17.84■□□□□ 0.45
TGFB1-202ENST00000597453 RAG1P15918 1043 aa17.84■□□□□ 0.45
TGFB1-202ENST00000597453 BEX3Q00994 111 aa17.84■□□□□ 0.45
TGFB1-202ENST00000597453 TNFAIP2Q03169 654 aa17.84■□□□□ 0.45
TGFB1-202ENST00000597453 GNASQ5JWF2 1037 aa17.84■□□□□ 0.45
TGFB1-202ENST00000597453 MFSD6Q6ZSS7 791 aa17.84■□□□□ 0.45
TGFB1-202ENST00000597453 PCSK9Q8NBP7 692 aaKnown RBP17.84■□□□□ 0.45
TGFB1-202ENST00000597453 SLC17A8Q8NDX2 589 aa17.84■□□□□ 0.45
TGFB1-202ENST00000597453 FAM161BQ96MY7 647 aa17.84■□□□□ 0.45
TGFB1-202ENST00000597453 GUCD1Q96NT3 240 aa17.84■□□□□ 0.45
TGFB1-202ENST00000597453 PDGFCQ9NRA1 345 aa17.84■□□□□ 0.45
TGFB1-202ENST00000597453 GNEQ9Y223 722 aaKnown RBP17.84■□□□□ 0.45
TGFB1-202ENST00000597453 DCDC2CA8MYV0 355 aa17.83■□□□□ 0.44
TGFB1-202ENST00000597453 NFIBO00712 420 aa17.83■□□□□ 0.44
TGFB1-202ENST00000597453 CDK7P50613 346 aa17.83■□□□□ 0.44
TGFB1-202ENST00000597453 NKX3-2P78367 333 aa17.83■□□□□ 0.44
TGFB1-202ENST00000597453 TMEM63BQ5T3F8 832 aa17.83■□□□□ 0.44
TGFB1-202ENST00000597453 FAM109BQ6ICB4 259 aaPredicted RBP17.83■□□□□ 0.44
TGFB1-202ENST00000597453 CWC27Q6UX04 472 aaKnown RBP17.83■□□□□ 0.44
TGFB1-202ENST00000597453 EEPD1Q7L9B9 569 aa17.83■□□□□ 0.44
TGFB1-202ENST00000597453 FBXO16Q8IX29 292 aaPredicted RBP17.83■□□□□ 0.44
TGFB1-202ENST00000597453 ZKSCAN3Q9BRR0 538 aa17.83■□□□□ 0.44
TGFB1-202ENST00000597453 TBX21Q9UL17 535 aa17.83■□□□□ 0.44
TGFB1-202ENST00000597453 SNHG28P0DPA3 235 aa17.82■□□□□ 0.44
TGFB1-202ENST00000597453 PCP11498 1178 aaKnown RBP17.82■□□□□ 0.44
TGFB1-202ENST00000597453 SMPD1P17405 629 aa17.82■□□□□ 0.44
TGFB1-202ENST00000597453 MFAP1P55081 439 aaKnown RBP17.82■□□□□ 0.44
TGFB1-202ENST00000597453 FPGSQ05932 587 aa17.82■□□□□ 0.44
TGFB1-202ENST00000597453 ZNF543Q08ER8 600 aa17.82■□□□□ 0.44
TGFB1-202ENST00000597453 BAATQ14032 418 aaPredicted RBP17.82■□□□□ 0.44
TGFB1-202ENST00000597453 TAPT1Q6NXT6 567 aa17.82■□□□□ 0.44
TGFB1-202ENST00000597453 NOL8Q76FK4 1167 aaKnown RBP17.82■□□□□ 0.44
TGFB1-202ENST00000597453 TLK2Q86UE8 772 aa17.82■□□□□ 0.44
TGFB1-202ENST00000597453 TTC14Q96N46 770 aa17.82■□□□□ 0.44
TGFB1-202ENST00000597453 RNF41Q9H4P4 317 aaPredicted RBP17.82■□□□□ 0.44
TGFB1-202ENST00000597453 DIAPH3Q9NSV4 1193 aa17.82■□□□□ 0.44
TGFB1-202ENST00000597453 A0A0U1RQG5 324 aaPredicted RBP17.81■□□□□ 0.44
TGFB1-202ENST00000597453 ZNF213O14771 459 aa17.81■□□□□ 0.44
TGFB1-202ENST00000597453 NEFLP07196 543 aa17.81■□□□□ 0.44
TGFB1-202ENST00000597453 PDE4AP27815 886 aa17.81■□□□□ 0.44
TGFB1-202ENST00000597453 CXCL17Q6UXB2 119 aa17.81■□□□□ 0.44
TGFB1-202ENST00000597453 SLC30A10Q6XR72 485 aa17.81■□□□□ 0.44
TGFB1-202ENST00000597453 MORC4Q8TE76 937 aa17.81■□□□□ 0.44
TGFB1-202ENST00000597453 CLEC4DQ8WXI8 215 aa17.81■□□□□ 0.44
TGFB1-202ENST00000597453 ESR2Q92731 530 aa17.81■□□□□ 0.44
TGFB1-202ENST00000597453 VTI1AQ96AJ9 217 aa17.81■□□□□ 0.44
TGFB1-202ENST00000597453 MROH7Q68CQ1 1323 aa17.8■□□□□ 0.44
TGFB1-202ENST00000597453 ARVCFO00192 962 aa17.8■□□□□ 0.44
TGFB1-202ENST00000597453 TIMP1P01033 207 aa17.8■□□□□ 0.44
TGFB1-202ENST00000597453 ZNF697Q5TEC3 545 aa17.8■□□□□ 0.44
TGFB1-202ENST00000597453 FAM126BQ8IXS8 530 aa17.8■□□□□ 0.44
TGFB1-202ENST00000597453 RNPC3Q96LT9 517 aaKnown RBP17.8■□□□□ 0.44
TGFB1-202ENST00000597453 CUL9Q8IWT3 2517 aa17.8■□□□□ 0.44
TGFB1-202ENST00000597453 MYH6P13533 1939 aa17.79■□□□□ 0.44
TGFB1-202ENST00000597453 DYNC1LI2O43237 492 aaPredicted RBP17.79■□□□□ 0.44
TGFB1-202ENST00000597453 KDM4AO75164 1064 aa17.79■□□□□ 0.44
TGFB1-202ENST00000597453 GOLGA8HP0CJ92 632 aa17.79■□□□□ 0.44
TGFB1-202ENST00000597453 ALDH5A1P51649 535 aaPredicted RBP17.79■□□□□ 0.44
TGFB1-202ENST00000597453 SMAD3P84022 425 aaKnown RBP17.79■□□□□ 0.44
TGFB1-202ENST00000597453 FSCN1Q16658 493 aaKnown RBP17.79■□□□□ 0.44
TGFB1-202ENST00000597453 CENPQQ7L2Z9 268 aaPredicted RBP17.79■□□□□ 0.44
TGFB1-202ENST00000597453 AP5M1Q9H0R1 490 aa17.79■□□□□ 0.44
TGFB1-202ENST00000597453 IL25Q9H293 177 aa17.79■□□□□ 0.44
TGFB1-202ENST00000597453 CPVLQ9H3G5 476 aa17.79■□□□□ 0.44
TGFB1-202ENST00000597453 VTA1Q9NP79 307 aa17.79■□□□□ 0.44
TGFB1-202ENST00000597453 UNC80Q8N2C7 3258 aa17.78■□□□□ 0.44
TGFB1-202ENST00000597453 WDR19Q8NEZ3 1342 aa17.78■□□□□ 0.44
TGFB1-202ENST00000597453 PTPDC1A2A3K4 754 aa17.78■□□□□ 0.44
TGFB1-202ENST00000597453 CALML3P27482 149 aa17.78■□□□□ 0.44
TGFB1-202ENST00000597453 IQSEC1Q6DN90 963 aa17.78■□□□□ 0.44
TGFB1-202ENST00000597453 MFSD5Q6N075 450 aa17.78■□□□□ 0.44
TGFB1-202ENST00000597453 KIAA1211Q6ZU35 1233 aa17.78■□□□□ 0.44
TGFB1-202ENST00000597453 DGKHQ86XP1 1220 aa17.78■□□□□ 0.44
TGFB1-202ENST00000597453 TTYH1Q9H313 450 aaPredicted RBP17.78■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 115 ms