RNA–Protein interactions for RNA: ENST00000589788.1

SDF2-208, Transcript of stromal cell derived factor 2, humanhuman

TSL 2

Gene SDF2, Length 1,342 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-208ENST00000589788 KRT23Q9C075 422 aa12.19□□□□□ -0.46
SDF2-208ENST00000589788 TCP11L1Q9NUJ3 509 aa12.19□□□□□ -0.46
SDF2-208ENST00000589788 FEM1BQ9UK73 627 aa12.19□□□□□ -0.46
SDF2-208ENST00000589788 ADAMTS5Q9UNA0 930 aa12.19□□□□□ -0.46
SDF2-208ENST00000589788 MTMR7Q9Y216 660 aa12.19□□□□□ -0.46
SDF2-208ENST00000589788 PLXNB2O15031 1838 aa12.19□□□□□ -0.46
SDF2-208ENST00000589788 SLC15A5A6NIM6 579 aa12.18□□□□□ -0.46
SDF2-208ENST00000589788 A6NJR5 290 aa12.18□□□□□ -0.46
SDF2-208ENST00000589788 TMEM232C9JQI7 657 aa12.18□□□□□ -0.46
SDF2-208ENST00000589788 ZBED4O75132 1171 aa12.18□□□□□ -0.46
SDF2-208ENST00000589788 INHAP05111 366 aa12.18□□□□□ -0.46
SDF2-208ENST00000589788 RGS2P41220 211 aa12.18□□□□□ -0.46
SDF2-208ENST00000589788 STAT2P52630 851 aa12.18□□□□□ -0.46
SDF2-208ENST00000589788 USP46P62068 366 aa12.18□□□□□ -0.46
SDF2-208ENST00000589788 TRDNQ13061 729 aa12.18□□□□□ -0.46
SDF2-208ENST00000589788 TMEM132BQ14DG7 1078 aa12.18□□□□□ -0.46
SDF2-208ENST00000589788 CSPP1Q1MSJ5 1256 aa12.18□□□□□ -0.46
SDF2-208ENST00000589788 CCDC96Q2M329 555 aa12.18□□□□□ -0.46
SDF2-208ENST00000589788 CCDC178Q5BJE1 867 aa12.18□□□□□ -0.46
SDF2-208ENST00000589788 NCAPG2Q86XI2 1143 aa12.18□□□□□ -0.46
SDF2-208ENST00000589788 SHCBP1Q8NEM2 672 aa12.18□□□□□ -0.46
SDF2-208ENST00000589788 CHURC1Q8WUH1 139 aa12.18□□□□□ -0.46
SDF2-208ENST00000589788 HLA-CQ95604 372 aa12.18□□□□□ -0.46
SDF2-208ENST00000589788 KIFC2Q96AC6 838 aa12.18□□□□□ -0.46
SDF2-208ENST00000589788 TTC14Q96N46 770 aa12.18□□□□□ -0.46
SDF2-208ENST00000589788 TMEM47Q9BQJ4 181 aa12.18□□□□□ -0.46
SDF2-208ENST00000589788 ZKSCAN3Q9BRR0 538 aa12.18□□□□□ -0.46
SDF2-208ENST00000589788 ESYT1Q9BSJ8 1104 aa12.18□□□□□ -0.46
SDF2-208ENST00000589788 MROH8Q9H579 483 aa12.18□□□□□ -0.46
SDF2-208ENST00000589788 KIAA0100Q14667 2235 aaKnown RBP12.18□□□□□ -0.46
SDF2-208ENST00000589788 STRNO43815 780 aa12.17□□□□□ -0.46
SDF2-208ENST00000589788 CDC45O75419 566 aa12.17□□□□□ -0.46
SDF2-208ENST00000589788 SLC25A27O95847 323 aa12.17□□□□□ -0.46
SDF2-208ENST00000589788 HMGCRP04035 888 aa12.17□□□□□ -0.46
SDF2-208ENST00000589788 XRCC5P13010 732 aaKnown RBP12.17□□□□□ -0.46
SDF2-208ENST00000589788 CCL5P13501 91 aa12.17□□□□□ -0.46
SDF2-208ENST00000589788 ERCC3P19447 782 aa12.17□□□□□ -0.46
SDF2-208ENST00000589788 COPB2P35606 906 aa12.17□□□□□ -0.46
SDF2-208ENST00000589788 STAT3P40763 770 aa12.17□□□□□ -0.46
SDF2-208ENST00000589788 NOVP48745 357 aa12.17□□□□□ -0.46
SDF2-208ENST00000589788 RGS19P49795 217 aa12.17□□□□□ -0.46
SDF2-208ENST00000589788 MORN1Q5T089 497 aa12.17□□□□□ -0.46
SDF2-208ENST00000589788 RCSD1Q6JBY9 416 aa12.17□□□□□ -0.46
SDF2-208ENST00000589788 FAM160B2Q86V87 743 aa12.17□□□□□ -0.46
SDF2-208ENST00000589788 TRMT44Q8IYL2 757 aaKnown RBP12.17□□□□□ -0.46
SDF2-208ENST00000589788 BANK1Q8NDB2 785 aa12.17□□□□□ -0.46
SDF2-208ENST00000589788 DCAF4Q8WV16 495 aa12.17□□□□□ -0.46
SDF2-208ENST00000589788 APBA2Q99767 749 aa12.17□□□□□ -0.46
SDF2-208ENST00000589788 UBAC1Q9BSL1 405 aa12.17□□□□□ -0.46
SDF2-208ENST00000589788 RNF208Q9H0X6 261 aa12.17□□□□□ -0.46
SDF2-208ENST00000589788 ANO2Q9NQ90 1003 aa12.17□□□□□ -0.46
SDF2-208ENST00000589788 RBBP6Q7Z6E9 1792 aaKnown RBP12.17□□□□□ -0.46
SDF2-208ENST00000589788 CYP21A2P08686 494 aa12.16□□□□□ -0.46
SDF2-208ENST00000589788 ZKSCAN1P17029 563 aaPredicted RBP12.16□□□□□ -0.46
SDF2-208ENST00000589788 SLC4A3P48751 1232 aa12.16□□□□□ -0.46
SDF2-208ENST00000589788 MLLT1Q03111 559 aaPredicted RBP12.16□□□□□ -0.46
SDF2-208ENST00000589788 GRB14Q14449 540 aa12.16□□□□□ -0.46
SDF2-208ENST00000589788 MTFR1Q15390 333 aa12.16□□□□□ -0.46
SDF2-208ENST00000589788 KCTD1Q719H9 257 aa12.16□□□□□ -0.46
SDF2-208ENST00000589788 RALYLQ86SE5 291 aaKnown RBP12.16□□□□□ -0.46
SDF2-208ENST00000589788 DPP9Q86TI2 863 aa12.16□□□□□ -0.46
SDF2-208ENST00000589788 DGKHQ86XP1 1220 aa12.16□□□□□ -0.46
SDF2-208ENST00000589788 RIOX2Q8IUF8 465 aa12.16□□□□□ -0.46
SDF2-208ENST00000589788 CPXCR1Q8N123 301 aa12.16□□□□□ -0.46
SDF2-208ENST00000589788 USP6NLQ92738 828 aa12.16□□□□□ -0.46
SDF2-208ENST00000589788 MAP4K1Q92918 833 aa12.16□□□□□ -0.46
SDF2-208ENST00000589788 POM121Q96HA1 1249 aa12.16□□□□□ -0.46
SDF2-208ENST00000589788 ZSCAN10Q96SZ4 725 aaPredicted RBP12.16□□□□□ -0.46
SDF2-208ENST00000589788 TEX13BQ9BXU2 312 aa12.16□□□□□ -0.46
SDF2-208ENST00000589788 ZSWIM5Q9P217 1185 aa12.16□□□□□ -0.46
SDF2-208ENST00000589788 PCDHGC3Q9UN70 934 aa12.16□□□□□ -0.46
SDF2-208ENST00000589788 RBM8AQ9Y5S9 174 aaKnown RBP12.16□□□□□ -0.46
SDF2-208ENST00000589788 FDX1P10109 184 aa12.15□□□□□ -0.46
SDF2-208ENST00000589788 FCER1AP12319 257 aa12.15□□□□□ -0.46
SDF2-208ENST00000589788 ADORA2AP29274 412 aa12.15□□□□□ -0.46
SDF2-208ENST00000589788 LSM11P83369 360 aaKnown RBP eCLIP12.15□□□□□ -0.46
SDF2-208ENST00000589788 GUCA2AQ02747 115 aa12.15□□□□□ -0.46
SDF2-208ENST00000589788 SNRNP48Q6IEG0 339 aaKnown RBP12.15□□□□□ -0.46
SDF2-208ENST00000589788 REPS2Q8NFH8 660 aa12.15□□□□□ -0.46
SDF2-208ENST00000589788 NKX2-3Q8TAU0 364 aa12.15□□□□□ -0.46
SDF2-208ENST00000589788 TRIB2Q92519 343 aa12.15□□□□□ -0.46
SDF2-208ENST00000589788 ZFRQ96KR1 1074 aaKnown RBP12.15□□□□□ -0.46
SDF2-208ENST00000589788 UNC93B1Q9H1C4 597 aa12.15□□□□□ -0.46
SDF2-208ENST00000589788 KAT14Q9H8E8 782 aa12.15□□□□□ -0.46
SDF2-208ENST00000589788 SLC38A10Q9HBR0 1119 aa12.15□□□□□ -0.46
SDF2-208ENST00000589788 SLC5A4Q9NY91 659 aa12.15□□□□□ -0.46
SDF2-208ENST00000589788 ZNF214Q9UL59 606 aaPredicted RBP12.15□□□□□ -0.46
SDF2-208ENST00000589788 TNKSO95271 1327 aa12.15□□□□□ -0.46
SDF2-208ENST00000589788 ZNF236Q9UL36 1845 aa12.15□□□□□ -0.46
SDF2-208ENST00000589788 E7EWF7 191 aa12.14□□□□□ -0.47
SDF2-208ENST00000589788 ATP2A1O14983 1001 aa12.14□□□□□ -0.47
SDF2-208ENST00000589788 PLA2G6O60733 806 aa12.14□□□□□ -0.47
SDF2-208ENST00000589788 EN2P19622 333 aaPredicted RBP12.14□□□□□ -0.47
SDF2-208ENST00000589788 OAZ1P54368 228 aa12.14□□□□□ -0.47
SDF2-208ENST00000589788 KCTD2Q14681 263 aa12.14□□□□□ -0.47
SDF2-208ENST00000589788 ADGRD1Q6QNK2 874 aa12.14□□□□□ -0.47
SDF2-208ENST00000589788 RASGRP2Q7LDG7 609 aa12.14□□□□□ -0.47
SDF2-208ENST00000589788 ABRAQ8N0Z2 381 aa12.14□□□□□ -0.47
SDF2-208ENST00000589788 PNMA1Q8ND90 353 aa12.14□□□□□ -0.47
SDF2-208ENST00000589788 NCOA7Q8NI08 942 aa12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 61.3 ms