RNA–Protein interactions for RNA: ENST00000577539.1

VAPA-203, Transcript of VAMP associated protein A, humanhuman

Gene VAPA, Length 3,760 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-203ENST00000577539 TLL2Q9Y6L7 1015 aa6.11□□□□□ -1.43
VAPA-203ENST00000577539 COL18A1P39060 1754 aa6.1□□□□□ -1.43
VAPA-203ENST00000577539 CCDC196A0A1B0GTZ2 297 aa6.1□□□□□ -1.43
VAPA-203ENST00000577539 ERVV-1B6SEH8 477 aa6.1□□□□□ -1.43
VAPA-203ENST00000577539 POLR2DO15514 142 aaKnown RBP6.1□□□□□ -1.43
VAPA-203ENST00000577539 CUTAO60888 179 aa6.1□□□□□ -1.43
VAPA-203ENST00000577539 ITGBL1O95965 494 aaPredicted RBP6.1□□□□□ -1.43
VAPA-203ENST00000577539 KCNQ4P56696 695 aa6.1□□□□□ -1.43
VAPA-203ENST00000577539 CHRNDQ07001 517 aa6.1□□□□□ -1.43
VAPA-203ENST00000577539 NCBP1Q09161 790 aaKnown RBP6.1□□□□□ -1.43
VAPA-203ENST00000577539 NOSTRINQ8IVI9 506 aa6.1□□□□□ -1.43
VAPA-203ENST00000577539 TMX1Q9H3N1 280 aa6.1□□□□□ -1.43
VAPA-203ENST00000577539 RNF41Q9H4P4 317 aaPredicted RBP6.1□□□□□ -1.43
VAPA-203ENST00000577539 GNL3LQ9NVN8 582 aaKnown RBP6.1□□□□□ -1.43
VAPA-203ENST00000577539 FANCLQ9NW38 375 aa6.1□□□□□ -1.43
VAPA-203ENST00000577539 JAG2Q9Y219 1238 aa6.1□□□□□ -1.43
VAPA-203ENST00000577539 ABCC12Q96J65 1359 aa6.1□□□□□ -1.43
VAPA-203ENST00000577539 WDR19Q8NEZ3 1342 aa6.1□□□□□ -1.43
VAPA-203ENST00000577539 CYP2D7A0A087X1C5 515 aa6.1□□□□□ -1.43
VAPA-203ENST00000577539 A6NJY4 79 aa6.1□□□□□ -1.43
VAPA-203ENST00000577539 CBFA2T2O43439 604 aa6.1□□□□□ -1.43
VAPA-203ENST00000577539 AFMP43652 599 aa6.1□□□□□ -1.43
VAPA-203ENST00000577539 NYAP1Q6ZVC0 841 aa6.1□□□□□ -1.43
VAPA-203ENST00000577539 GRAMD1CQ8IYS0 662 aa6.1□□□□□ -1.43
VAPA-203ENST00000577539 ZNF34Q8IZ26 560 aa6.1□□□□□ -1.43
VAPA-203ENST00000577539 ZNF654Q8IZM8 581 aa6.1□□□□□ -1.43
VAPA-203ENST00000577539 VTI1AQ96AJ9 217 aa6.1□□□□□ -1.43
VAPA-203ENST00000577539 OSBPL7Q9BZF2 842 aa6.1□□□□□ -1.43
VAPA-203ENST00000577539 CDV3Q9UKY7 258 aaKnown RBP6.1□□□□□ -1.43
VAPA-203ENST00000577539 POLIQ9UNA4 740 aa6.1□□□□□ -1.43
VAPA-203ENST00000577539 TCRBV5S4A2TA0A5A2 114 aa6.1□□□□□ -1.43
VAPA-203ENST00000577539 SMIM22K7EJ46 135 aa6.1□□□□□ -1.43
VAPA-203ENST00000577539 PPP6R2O75170 966 aa6.1□□□□□ -1.43
VAPA-203ENST00000577539 LDHBP07195 334 aaKnown RBP6.1□□□□□ -1.43
VAPA-203ENST00000577539 IFNAR1P17181 557 aa6.1□□□□□ -1.43
VAPA-203ENST00000577539 XBP1P17861 261 aa6.1□□□□□ -1.43
VAPA-203ENST00000577539 VARSP26640 1264 aaKnown RBP6.1□□□□□ -1.43
VAPA-203ENST00000577539 LIFRP42702 1097 aa6.1□□□□□ -1.43
VAPA-203ENST00000577539 GRIN1Q05586 938 aa6.1□□□□□ -1.43
VAPA-203ENST00000577539 NTRK3Q16288 839 aa6.1□□□□□ -1.43
VAPA-203ENST00000577539 ZNF394Q53GI3 561 aa6.1□□□□□ -1.43
VAPA-203ENST00000577539 ARMCX5Q6P1M9 558 aa6.1□□□□□ -1.43
VAPA-203ENST00000577539 KRBA2Q6ZNG9 492 aa6.1□□□□□ -1.43
VAPA-203ENST00000577539 SMIM5Q71RC9 77 aa6.1□□□□□ -1.43
VAPA-203ENST00000577539 NBPF11Q86T75 865 aa6.1□□□□□ -1.43
VAPA-203ENST00000577539 DPF2Q92785 391 aa6.1□□□□□ -1.43
VAPA-203ENST00000577539 SPACA7Q96KW9 195 aa6.1□□□□□ -1.43
VAPA-203ENST00000577539 VPS54Q9P1Q0 977 aa6.1□□□□□ -1.43
VAPA-203ENST00000577539 SERTAD1Q9UHV2 236 aa6.1□□□□□ -1.43
VAPA-203ENST00000577539 TNS2Q63HR2 1409 aa6.1□□□□□ -1.43
VAPA-203ENST00000577539 PLEKHG2Q9H7P9 1386 aa6.09□□□□□ -1.43
VAPA-203ENST00000577539 LOC102724428A0A0B4J2F2 783 aa6.09□□□□□ -1.43
VAPA-203ENST00000577539 WTIPA6NIX2 430 aaPredicted RBP6.09□□□□□ -1.43
VAPA-203ENST00000577539 MAFGO15525 162 aa6.09□□□□□ -1.43
VAPA-203ENST00000577539 PDGFAP04085 211 aa6.09□□□□□ -1.43
VAPA-203ENST00000577539 GNAT2P19087 354 aa6.09□□□□□ -1.43
VAPA-203ENST00000577539 FGFR2P21802 821 aa6.09□□□□□ -1.43
VAPA-203ENST00000577539 SIK1P57059 783 aa6.09□□□□□ -1.43
VAPA-203ENST00000577539 PPARAQ07869 468 aa6.09□□□□□ -1.43
VAPA-203ENST00000577539 ORC1Q13415 861 aa6.09□□□□□ -1.43
VAPA-203ENST00000577539 PTPAQ15257 358 aa6.09□□□□□ -1.43
VAPA-203ENST00000577539 SGMS1Q86VZ5 419 aa6.09□□□□□ -1.43
VAPA-203ENST00000577539 ZSCAN29Q8IWY8 852 aaPredicted RBP6.09□□□□□ -1.43
VAPA-203ENST00000577539 FANCBQ8NB91 859 aa6.09□□□□□ -1.43
VAPA-203ENST00000577539 ESR2Q92731 530 aa6.09□□□□□ -1.43
VAPA-203ENST00000577539 SMARCE1Q969G3 411 aa6.09□□□□□ -1.43
VAPA-203ENST00000577539 DHX58Q96C10 678 aa6.09□□□□□ -1.43
VAPA-203ENST00000577539 ZNF512BQ96KM6 892 aaPredicted RBP6.09□□□□□ -1.43
VAPA-203ENST00000577539 DMRTB1Q96MA1 342 aa6.09□□□□□ -1.43
VAPA-203ENST00000577539 CDC5LQ99459 802 aaKnown RBP6.09□□□□□ -1.43
VAPA-203ENST00000577539 IMPACTQ9P2X3 320 aa6.09□□□□□ -1.43
VAPA-203ENST00000577539 DNAI1Q9UI46 699 aa6.09□□□□□ -1.43
VAPA-203ENST00000577539 PCDHB6Q9Y5E3 794 aa6.09□□□□□ -1.43
VAPA-203ENST00000577539 DEXIO95424 95 aa6.09□□□□□ -1.43
VAPA-203ENST00000577539 FGRP09769 529 aa6.09□□□□□ -1.43
VAPA-203ENST00000577539 EIF5P55010 431 aaKnown RBP6.09□□□□□ -1.43
VAPA-203ENST00000577539 STX17P56962 302 aa6.09□□□□□ -1.43
VAPA-203ENST00000577539 DYNLL1P63167 89 aaKnown RBP6.09□□□□□ -1.43
VAPA-203ENST00000577539 ALX1Q15699 326 aa6.09□□□□□ -1.43
VAPA-203ENST00000577539 CAVIN4Q5BKX8 364 aa6.09□□□□□ -1.43
VAPA-203ENST00000577539 ANKRD18AQ8IVF6 992 aa6.09□□□□□ -1.43
VAPA-203ENST00000577539 CCDC34Q96HJ3 373 aa6.09□□□□□ -1.43
VAPA-203ENST00000577539 V9GY48 417 aaPredicted RBP6.09□□□□□ -1.43
VAPA-203ENST00000577539 TNKSO95271 1327 aa6.09□□□□□ -1.43
VAPA-203ENST00000577539 TLDC2A0PJX2 215 aa6.09□□□□□ -1.44
VAPA-203ENST00000577539 TMEM232C9JQI7 657 aa6.09□□□□□ -1.44
VAPA-203ENST00000577539 URI1O94763 535 aaPredicted RBP6.09□□□□□ -1.44
VAPA-203ENST00000577539 GNRH1P01148 92 aa6.09□□□□□ -1.44
VAPA-203ENST00000577539 MMP1P03956 469 aa6.09□□□□□ -1.44
VAPA-203ENST00000577539 WNT7BP56706 349 aa6.09□□□□□ -1.44
VAPA-203ENST00000577539 NCAPHQ15003 741 aa6.09□□□□□ -1.44
VAPA-203ENST00000577539 ELF2Q15723 593 aa6.09□□□□□ -1.44
VAPA-203ENST00000577539 PARP10Q53GL7 1025 aa6.09□□□□□ -1.44
VAPA-203ENST00000577539 RILPL1Q5EBL4 403 aa6.09□□□□□ -1.44
VAPA-203ENST00000577539 IFIT1BQ5T764 474 aaKnown RBP6.09□□□□□ -1.44
VAPA-203ENST00000577539 RESP18Q5W5W9 173 aa6.09□□□□□ -1.44
VAPA-203ENST00000577539 CATIPQ7Z7H3 387 aa6.09□□□□□ -1.44
VAPA-203ENST00000577539 IQCA1Q86XH1 822 aa6.09□□□□□ -1.44
VAPA-203ENST00000577539 TMTC2Q8N394 836 aa6.09□□□□□ -1.44
VAPA-203ENST00000577539 NME8Q8N427 588 aa6.09□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 68.3 ms