RNA–Protein interactions for RNA: ENST00000574344.5

NPLOC4-216, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 4

Gene NPLOC4, Length 573 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-216ENST00000574344 NUP133Q8WUM0 1156 aa11.33□□□□□ -0.6
NPLOC4-216ENST00000574344 FGD4Q96M96 766 aa11.33□□□□□ -0.6
NPLOC4-216ENST00000574344 TTC14Q96N46 770 aa11.33□□□□□ -0.6
NPLOC4-216ENST00000574344 RANBP17Q9H2T7 1088 aaKnown RBP11.33□□□□□ -0.6
NPLOC4-216ENST00000574344 KAT14Q9H8E8 782 aa11.33□□□□□ -0.6
NPLOC4-216ENST00000574344 STARD7Q9NQZ5 370 aa11.33□□□□□ -0.6
NPLOC4-216ENST00000574344 CTNNA3Q9UI47 895 aa11.33□□□□□ -0.6
NPLOC4-216ENST00000574344 LAMA3Q16787 3333 aa11.33□□□□□ -0.6
NPLOC4-216ENST00000574344 MOXD2PA6NHM9 499 aa11.32□□□□□ -0.6
NPLOC4-216ENST00000574344 GSPT1P15170 499 aaKnown RBP11.32□□□□□ -0.6
NPLOC4-216ENST00000574344 ACLYP53396 1101 aa11.32□□□□□ -0.6
NPLOC4-216ENST00000574344 ZNF543Q08ER8 600 aa11.32□□□□□ -0.6
NPLOC4-216ENST00000574344 SNX17Q15036 470 aa11.32□□□□□ -0.6
NPLOC4-216ENST00000574344 KCNA10Q16322 511 aa11.32□□□□□ -0.6
NPLOC4-216ENST00000574344 BTNL9Q6UXG8 535 aa11.32□□□□□ -0.6
NPLOC4-216ENST00000574344 PCSK9Q8NBP7 692 aaKnown RBP11.32□□□□□ -0.6
NPLOC4-216ENST00000574344 PNMA1Q8ND90 353 aa11.32□□□□□ -0.6
NPLOC4-216ENST00000574344 RUFY2Q8WXA3 655 aa11.32□□□□□ -0.6
NPLOC4-216ENST00000574344 VTI1AQ96AJ9 217 aa11.32□□□□□ -0.6
NPLOC4-216ENST00000574344 UBAC1Q9BSL1 405 aa11.32□□□□□ -0.6
NPLOC4-216ENST00000574344 KRT23Q9C075 422 aa11.32□□□□□ -0.6
NPLOC4-216ENST00000574344 CNNM2Q9H8M5 875 aa11.32□□□□□ -0.6
NPLOC4-216ENST00000574344 PDLIM7Q9NR12 457 aa11.32□□□□□ -0.6
NPLOC4-216ENST00000574344 CYP39A1Q9NYL5 469 aa11.32□□□□□ -0.6
NPLOC4-216ENST00000574344 RAD50Q92878 1312 aa11.32□□□□□ -0.6
NPLOC4-216ENST00000574344 LAMA2P24043 3122 aaKnown RBP11.31□□□□□ -0.6
NPLOC4-216ENST00000574344 KIAA1217Q5T5P2 1943 aa11.31□□□□□ -0.6
NPLOC4-216ENST00000574344 MYADML2A6NDP7 307 aa11.31□□□□□ -0.6
NPLOC4-216ENST00000574344 SOWAHBA6NEL2 793 aa11.31□□□□□ -0.6
NPLOC4-216ENST00000574344 NFIBO00712 420 aa11.31□□□□□ -0.6
NPLOC4-216ENST00000574344 DHX16O60231 1041 aaKnown RBP11.31□□□□□ -0.6
NPLOC4-216ENST00000574344 CLTBP09497 229 aa11.31□□□□□ -0.6
NPLOC4-216ENST00000574344 GOLGA8HP0CJ92 632 aa11.31□□□□□ -0.6
NPLOC4-216ENST00000574344 NT5C2P49902 561 aa11.31□□□□□ -0.6
NPLOC4-216ENST00000574344 TNFAIP2Q03169 654 aa11.31□□□□□ -0.6
NPLOC4-216ENST00000574344 TLE2Q04725 743 aa11.31□□□□□ -0.6
NPLOC4-216ENST00000574344 USH1GQ495M9 461 aa11.31□□□□□ -0.6
NPLOC4-216ENST00000574344 GPATCH4Q5T3I0 446 aaKnown RBP11.31□□□□□ -0.6
NPLOC4-216ENST00000574344 EEPD1Q7L9B9 569 aa11.31□□□□□ -0.6
NPLOC4-216ENST00000574344 DGKHQ86XP1 1220 aa11.31□□□□□ -0.6
NPLOC4-216ENST00000574344 FBXO16Q8IX29 292 aaPredicted RBP11.31□□□□□ -0.6
NPLOC4-216ENST00000574344 GLT1D1Q96MS3 346 aa11.31□□□□□ -0.6
NPLOC4-216ENST00000574344 ZSCAN10Q96SZ4 725 aaPredicted RBP11.31□□□□□ -0.6
NPLOC4-216ENST00000574344 TSEN34Q9BSV6 310 aaKnown RBP11.31□□□□□ -0.6
NPLOC4-216ENST00000574344 ADD3Q9UEY8 706 aaKnown RBP11.31□□□□□ -0.6
NPLOC4-216ENST00000574344 TNKSO95271 1327 aa11.31□□□□□ -0.6
NPLOC4-216ENST00000574344 C11orf97A0A1B0GVM6 126 aaPredicted RBP11.3□□□□□ -0.6
NPLOC4-216ENST00000574344 DCDC2CA8MYV0 355 aa11.3□□□□□ -0.6
NPLOC4-216ENST00000574344 ADCY6O43306 1168 aa11.3□□□□□ -0.6
NPLOC4-216ENST00000574344 ASGR1P07306 291 aa11.3□□□□□ -0.6
NPLOC4-216ENST00000574344 CALML3P27482 149 aa11.3□□□□□ -0.6
NPLOC4-216ENST00000574344 IRX5P78411 483 aaPredicted RBP11.3□□□□□ -0.6
NPLOC4-216ENST00000574344 TRDNQ13061 729 aa11.3□□□□□ -0.6
NPLOC4-216ENST00000574344 BAATQ14032 418 aaPredicted RBP11.3□□□□□ -0.6
NPLOC4-216ENST00000574344 LRIT3Q3SXY7 679 aa11.3□□□□□ -0.6
NPLOC4-216ENST00000574344 GNASQ5JWF2 1037 aa11.3□□□□□ -0.6
NPLOC4-216ENST00000574344 C1orf53Q5VUE5 145 aa11.3□□□□□ -0.6
NPLOC4-216ENST00000574344 SLC30A10Q6XR72 485 aa11.3□□□□□ -0.6
NPLOC4-216ENST00000574344 SH3RF1Q7Z6J0 888 aa11.3□□□□□ -0.6
NPLOC4-216ENST00000574344 TLK2Q86UE8 772 aa11.3□□□□□ -0.6
NPLOC4-216ENST00000574344 KLHDC9Q8NEP7 349 aa11.3□□□□□ -0.6
NPLOC4-216ENST00000574344 BADQ92934 168 aa11.3□□□□□ -0.6
NPLOC4-216ENST00000574344 MPHOSPH6Q99547 160 aaKnown RBP11.3□□□□□ -0.6
NPLOC4-216ENST00000574344 BACH2Q9BYV9 841 aa11.3□□□□□ -0.6
NPLOC4-216ENST00000574344 UBA5Q9GZZ9 404 aa11.3□□□□□ -0.6
NPLOC4-216ENST00000574344 AP5M1Q9H0R1 490 aa11.3□□□□□ -0.6
NPLOC4-216ENST00000574344 IL25Q9H293 177 aa11.3□□□□□ -0.6
NPLOC4-216ENST00000574344 CPVLQ9H3G5 476 aa11.3□□□□□ -0.6
NPLOC4-216ENST00000574344 PNMA2Q9UL42 364 aa11.3□□□□□ -0.6
NPLOC4-216ENST00000574344 DDX49Q9Y6V7 483 aaKnown RBP11.3□□□□□ -0.6
NPLOC4-216ENST00000574344 MYH7BA7E2Y1 1941 aa11.3□□□□□ -0.6
NPLOC4-216ENST00000574344 MROH7Q68CQ1 1323 aa11.3□□□□□ -0.6
NPLOC4-216ENST00000574344 BAZ2BQ9UIF8 2168 aaKnown RBP11.29□□□□□ -0.6
NPLOC4-216ENST00000574344 A0A0U1RQG5 324 aaPredicted RBP11.29□□□□□ -0.6
NPLOC4-216ENST00000574344 SNHG28P0DPA3 235 aa11.29□□□□□ -0.6
NPLOC4-216ENST00000574344 RAG1P15918 1043 aa11.29□□□□□ -0.6
NPLOC4-216ENST00000574344 CST5P28325 142 aaPredicted RBP11.29□□□□□ -0.6
NPLOC4-216ENST00000574344 ALDH5A1P51649 535 aaPredicted RBP11.29□□□□□ -0.6
NPLOC4-216ENST00000574344 GJA9P57773 515 aa11.29□□□□□ -0.6
NPLOC4-216ENST00000574344 BEX3Q00994 111 aa11.29□□□□□ -0.6
NPLOC4-216ENST00000574344 CDC37Q16543 378 aaPredicted RBP11.29□□□□□ -0.6
NPLOC4-216ENST00000574344 ASPRV1Q53RT3 343 aa11.29□□□□□ -0.6
NPLOC4-216ENST00000574344 IFIT1BQ5T764 474 aaKnown RBP11.29□□□□□ -0.6
NPLOC4-216ENST00000574344 RNF207Q6ZRF8 634 aa11.29□□□□□ -0.6
NPLOC4-216ENST00000574344 KIAA1211Q6ZU35 1233 aa11.29□□□□□ -0.6
NPLOC4-216ENST00000574344 ENAHQ8N8S7 591 aaPredicted RBP11.29□□□□□ -0.6
NPLOC4-216ENST00000574344 PURBQ96QR8 312 aaKnown RBP11.29□□□□□ -0.6
NPLOC4-216ENST00000574344 KATNBL1Q9H079 304 aa11.29□□□□□ -0.6
NPLOC4-216ENST00000574344 UPF3AQ9H1J1 476 aaKnown RBP11.29□□□□□ -0.6
NPLOC4-216ENST00000574344 VTA1Q9NP79 307 aa11.29□□□□□ -0.6
NPLOC4-216ENST00000574344 TMEM39AQ9NV64 488 aa11.29□□□□□ -0.6
NPLOC4-216ENST00000574344 ASTN1O14525 1302 aa11.29□□□□□ -0.6
NPLOC4-216ENST00000574344 WDR19Q8NEZ3 1342 aa11.29□□□□□ -0.6
NPLOC4-216ENST00000574344 TRIM43BA6NCK2 446 aa11.28□□□□□ -0.6
NPLOC4-216ENST00000574344 ZEB2O60315 1214 aa11.28□□□□□ -0.6
NPLOC4-216ENST00000574344 PARP1P09874 1014 aaKnown RBP11.28□□□□□ -0.6
NPLOC4-216ENST00000574344 PDE4DQ08499 809 aa11.28□□□□□ -0.6
NPLOC4-216ENST00000574344 RALYLQ86SE5 291 aaKnown RBP11.28□□□□□ -0.6
NPLOC4-216ENST00000574344 DEFB123Q8N688 67 aa11.28□□□□□ -0.6
NPLOC4-216ENST00000574344 TRIM43Q96BQ3 446 aaPredicted RBP11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms