RNA–Protein interactions for RNA: ENST00000563945.1

HERC2-204, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 2, humanhuman

TSL 1 (best)

Gene HERC2, Length 491 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC2-204ENST00000563945 CXCL17Q6UXB2 119 aa24.71■■□□□ 1.55
HERC2-204ENST00000563945 NSMFQ6X4W1 530 aa24.71■■□□□ 1.55
HERC2-204ENST00000563945 TLK2Q86UE8 772 aa24.71■■□□□ 1.55
HERC2-204ENST00000563945 KATNBL1Q9H079 304 aa24.71■■□□□ 1.55
HERC2-204ENST00000563945 CCPG1Q9ULG6 757 aa24.71■■□□□ 1.55
HERC2-204ENST00000563945 PRR12Q9ULL5 1215 aa24.71■■□□□ 1.55
HERC2-204ENST00000563945 ACRP10323 421 aa24.7■■□□□ 1.54
HERC2-204ENST00000563945 SNAP25P60880 206 aa24.7■■□□□ 1.54
HERC2-204ENST00000563945 FSCN1Q16658 493 aaKnown RBP24.7■■□□□ 1.54
HERC2-204ENST00000563945 ZNF365Q70YC5 407 aa24.7■■□□□ 1.54
HERC2-204ENST00000563945 OTUD7AQ8TE49 926 aaPredicted RBP24.7■■□□□ 1.54
HERC2-204ENST00000563945 GAS2L1Q99501 681 aaPredicted RBP24.7■■□□□ 1.54
HERC2-204ENST00000563945 SEZ6LQ9BYH1 1024 aa24.7■■□□□ 1.54
HERC2-204ENST00000563945 PCDHB15Q9Y5E8 787 aa24.7■■□□□ 1.54
HERC2-204ENST00000563945 NKX3-2P78367 333 aa24.69■■□□□ 1.54
HERC2-204ENST00000563945 ITGA7Q13683 1181 aa24.69■■□□□ 1.54
HERC2-204ENST00000563945 EEPD1Q7L9B9 569 aa24.69■■□□□ 1.54
HERC2-204ENST00000563945 CYP39A1Q9NYL5 469 aa24.69■■□□□ 1.54
HERC2-204ENST00000563945 MSRAQ9UJ68 235 aa24.69■■□□□ 1.54
HERC2-204ENST00000563945 DDX52Q9Y2R4 599 aaKnown RBP eCLIP24.69■■□□□ 1.54
HERC2-204ENST00000563945 NMT2O60551 498 aa24.68■■□□□ 1.54
HERC2-204ENST00000563945 CYP2C18P33260 490 aa24.68■■□□□ 1.54
HERC2-204ENST00000563945 KIAA1211Q6ZU35 1233 aa24.68■■□□□ 1.54
HERC2-204ENST00000563945 C16orf59Q7L2K0 433 aa24.68■■□□□ 1.54
HERC2-204ENST00000563945 DCAF4Q8WV16 495 aa24.68■■□□□ 1.54
HERC2-204ENST00000563945 HIPK3Q9H422 1215 aa24.68■■□□□ 1.54
HERC2-204ENST00000563945 IL23AQ9NPF7 189 aa24.68■■□□□ 1.54
HERC2-204ENST00000563945 INCENPQ9NQS7 918 aa24.68■■□□□ 1.54
HERC2-204ENST00000563945 IL17RBQ9NRM6 502 aa24.68■■□□□ 1.54
HERC2-204ENST00000563945 GNEQ9Y223 722 aaKnown RBP24.68■■□□□ 1.54
HERC2-204ENST00000563945 CTAGE5O15320 804 aa24.67■■□□□ 1.54
HERC2-204ENST00000563945 CD4P01730 458 aa24.67■■□□□ 1.54
HERC2-204ENST00000563945 FGBP02675 491 aa24.67■■□□□ 1.54
HERC2-204ENST00000563945 SMPD1P17405 629 aa24.67■■□□□ 1.54
HERC2-204ENST00000563945 MUM1L1Q5H9M0 696 aa24.67■■□□□ 1.54
HERC2-204ENST00000563945 ANKRD45Q5TZF3 282 aa24.67■■□□□ 1.54
HERC2-204ENST00000563945 EVI5LQ96CN4 794 aa24.67■■□□□ 1.54
HERC2-204ENST00000563945 VTA1Q9NP79 307 aa24.67■■□□□ 1.54
HERC2-204ENST00000563945 ADD3Q9UEY8 706 aaKnown RBP24.67■■□□□ 1.54
HERC2-204ENST00000563945 ANAPC4Q9UJX5 808 aa24.67■■□□□ 1.54
HERC2-204ENST00000563945 Q9Y3F1 56 aa24.67■■□□□ 1.54
HERC2-204ENST00000563945 UNC80Q8N2C7 3258 aa24.66■■□□□ 1.54
HERC2-204ENST00000563945 ICAM1P05362 532 aa24.66■■□□□ 1.54
HERC2-204ENST00000563945 RRP12Q5JTH9 1297 aaKnown RBP24.66■■□□□ 1.54
HERC2-204ENST00000563945 FBXO16Q8IX29 292 aaPredicted RBP24.66■■□□□ 1.54
HERC2-204ENST00000563945 PDGFCQ9NRA1 345 aa24.66■■□□□ 1.54
HERC2-204ENST00000563945 ASTN1O14525 1302 aa24.65■■□□□ 1.54
HERC2-204ENST00000563945 GRXCR1A8MXD5 290 aa24.65■■□□□ 1.54
HERC2-204ENST00000563945 RAB30Q15771 203 aa24.65■■□□□ 1.54
HERC2-204ENST00000563945 SLC43A3Q8NBI5 491 aa24.65■■□□□ 1.54
HERC2-204ENST00000563945 PBX4Q9BYU1 374 aa24.65■■□□□ 1.54
HERC2-204ENST00000563945 HELLSQ9NRZ9 838 aa24.65■■□□□ 1.54
HERC2-204ENST00000563945 ORC4O43929 436 aa24.64■■□□□ 1.54
HERC2-204ENST00000563945 RASIP1Q5U651 963 aa24.64■■□□□ 1.54
HERC2-204ENST00000563945 TAPT1Q6NXT6 567 aa24.64■■□□□ 1.54
HERC2-204ENST00000563945 RPUSD2Q8IZ73 545 aaKnown RBP24.64■■□□□ 1.54
HERC2-204ENST00000563945 PPM1EQ8WY54 764 aa24.64■■□□□ 1.54
HERC2-204ENST00000563945 PTPDC1A2A3K4 754 aa24.63■■□□□ 1.53
HERC2-204ENST00000563945 TOP1P11387 765 aaKnown RBP24.63■■□□□ 1.53
HERC2-204ENST00000563945 SLC16A2P36021 539 aa24.63■■□□□ 1.53
HERC2-204ENST00000563945 PBX2P40425 430 aa24.63■■□□□ 1.53
HERC2-204ENST00000563945 CCL23P55773 120 aa24.63■■□□□ 1.53
HERC2-204ENST00000563945 BAATQ14032 418 aaPredicted RBP24.63■■□□□ 1.53
HERC2-204ENST00000563945 ALX1Q15699 326 aa24.63■■□□□ 1.53
HERC2-204ENST00000563945 SYDE2Q5VT97 1194 aa24.63■■□□□ 1.53
HERC2-204ENST00000563945 HERVK_113Q902F9 699 aa24.63■■□□□ 1.53
HERC2-204ENST00000563945 MPHOSPH6Q99547 160 aaKnown RBP24.63■■□□□ 1.53
HERC2-204ENST00000563945 GPCPD1Q9NPB8 672 aa24.63■■□□□ 1.53
HERC2-204ENST00000563945 GPHNQ9NQX3 736 aaPredicted RBP24.63■■□□□ 1.53
HERC2-204ENST00000563945 PNMA2Q9UL42 364 aa24.63■■□□□ 1.53
HERC2-204ENST00000563945 VPS53Q5VIR6 699 aa24.62■■□□□ 1.53
HERC2-204ENST00000563945 TTBK2Q6IQ55 1244 aa24.62■■□□□ 1.53
HERC2-204ENST00000563945 TRPV6Q9H1D0 765 aa24.62■■□□□ 1.53
HERC2-204ENST00000563945 RANBP17Q9H2T7 1088 aaKnown RBP24.62■■□□□ 1.53
HERC2-204ENST00000563945 PRDM12Q9H4Q4 367 aa24.62■■□□□ 1.53
HERC2-204ENST00000563945 SLC28A3Q9HAS3 691 aa24.62■■□□□ 1.53
HERC2-204ENST00000563945 POLR3EQ9NVU0 708 aa24.62■■□□□ 1.53
HERC2-204ENST00000563945 DDX49Q9Y6V7 483 aaKnown RBP24.62■■□□□ 1.53
HERC2-204ENST00000563945 SUPT20HL2P0C7V6 817 aa24.61■■□□□ 1.53
HERC2-204ENST00000563945 MCMDC2Q4G0Z9 681 aa24.61■■□□□ 1.53
HERC2-204ENST00000563945 BRDTQ58F21 947 aaPredicted RBP24.61■■□□□ 1.53
HERC2-204ENST00000563945 TJAP1Q5JTD0 557 aa24.61■■□□□ 1.53
HERC2-204ENST00000563945 OTOP2Q7RTS6 562 aa24.61■■□□□ 1.53
HERC2-204ENST00000563945 WDR11Q9BZH6 1224 aa24.61■■□□□ 1.53
HERC2-204ENST00000563945 MYO9BQ13459 2157 aa24.61■■□□□ 1.53
HERC2-204ENST00000563945 FRMPD2Q68DX3 1309 aaPredicted RBP24.61■■□□□ 1.53
HERC2-204ENST00000563945 LOC102724159A0A0B4J2E5 919 aa24.6■■□□□ 1.53
HERC2-204ENST00000563945 FOXP2O15409 715 aa24.6■■□□□ 1.53
HERC2-204ENST00000563945 PSMC6P62333 389 aa24.6■■□□□ 1.53
HERC2-204ENST00000563945 PWP2Q15269 919 aaKnown RBP24.6■■□□□ 1.53
HERC2-204ENST00000563945 DUSP28Q4G0W2 176 aa24.6■■□□□ 1.53
HERC2-204ENST00000563945 BTNL9Q6UXG8 535 aa24.6■■□□□ 1.53
HERC2-204ENST00000563945 RASGRP2Q7LDG7 609 aa24.6■■□□□ 1.53
HERC2-204ENST00000563945 PURBQ96QR8 312 aaKnown RBP24.6■■□□□ 1.53
HERC2-204ENST00000563945 TMEM47Q9BQJ4 181 aa24.6■■□□□ 1.53
HERC2-204ENST00000563945 B4DLN1 442 aa24.59■■□□□ 1.53
HERC2-204ENST00000563945 B4GALT4O60513 344 aa24.59■■□□□ 1.53
HERC2-204ENST00000563945 FGAP02671 866 aa24.59■■□□□ 1.53
HERC2-204ENST00000563945 IGFBP4P22692 258 aa24.59■■□□□ 1.53
HERC2-204ENST00000563945 CALML3P27482 149 aa24.59■■□□□ 1.53
Retrieved 100 of 20,778 RNA–protein pairs in 149.4 ms