RNA–Protein interactions for RNA: ENST00000560098.5

CRTC3-208, Transcript of CREB regulated transcription coactivator 3, humanhuman

TSL 1 (best) BASIC

Gene CRTC3, Length 1,421 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRTC3-208ENST00000560098 CCDC96Q2M329 555 aa20.56■□□□□ 0.88
CRTC3-208ENST00000560098 MUM1L1Q5H9M0 696 aa20.56■□□□□ 0.88
CRTC3-208ENST00000560098 DCAF4Q8WV16 495 aa20.56■□□□□ 0.88
CRTC3-208ENST00000560098 CYP39A1Q9NYL5 469 aa20.56■□□□□ 0.88
CRTC3-208ENST00000560098 CCPG1Q9ULG6 757 aa20.56■□□□□ 0.88
CRTC3-208ENST00000560098 GNEQ9Y223 722 aaKnown RBP20.56■□□□□ 0.88
CRTC3-208ENST00000560098 ASTN1O14525 1302 aa20.56■□□□□ 0.88
CRTC3-208ENST00000560098 HSFX4A0A1B0GTS1 333 aaPredicted RBP20.55■□□□□ 0.88
CRTC3-208ENST00000560098 HSFX3A0A1B0GWH4 333 aaPredicted RBP20.55■□□□□ 0.88
CRTC3-208ENST00000560098 TLR3O15455 904 aaKnown RBP20.55■□□□□ 0.88
CRTC3-208ENST00000560098 FGAP02671 866 aa20.55■□□□□ 0.88
CRTC3-208ENST00000560098 ICAM1P05362 532 aa20.55■□□□□ 0.88
CRTC3-208ENST00000560098 HDAC1Q13547 482 aaPredicted RBP20.55■□□□□ 0.88
CRTC3-208ENST00000560098 FAM126BQ8IXS8 530 aa20.55■□□□□ 0.88
CRTC3-208ENST00000560098 MYLIPQ8WY64 445 aa20.55■□□□□ 0.88
CRTC3-208ENST00000560098 FAM227BQ96M60 508 aa20.55■□□□□ 0.88
CRTC3-208ENST00000560098 TOMM22Q9NS69 142 aa20.55■□□□□ 0.88
CRTC3-208ENST00000560098 CUL9Q8IWT3 2517 aa20.55■□□□□ 0.88
CRTC3-208ENST00000560098 PPIGQ13427 754 aaKnown RBP eCLIP20.54■□□□□ 0.88
CRTC3-208ENST00000560098 MCMDC2Q4G0Z9 681 aa20.54■□□□□ 0.88
CRTC3-208ENST00000560098 NSMFQ6X4W1 530 aa20.54■□□□□ 0.88
CRTC3-208ENST00000560098 TLK2Q86UE8 772 aa20.54■□□□□ 0.88
CRTC3-208ENST00000560098 TICAM2Q86XR7 235 aa20.54■□□□□ 0.88
CRTC3-208ENST00000560098 MAFAQ8NHW3 353 aaPredicted RBP20.54■□□□□ 0.88
CRTC3-208ENST00000560098 BUD13Q9BRD0 619 aaKnown RBP eCLIP20.54■□□□□ 0.88
CRTC3-208ENST00000560098 RANBP17Q9H2T7 1088 aaKnown RBP20.54■□□□□ 0.88
CRTC3-208ENST00000560098 A0A0D9SFI3 127 aa20.53■□□□□ 0.88
CRTC3-208ENST00000560098 TOP1P11387 765 aaKnown RBP20.53■□□□□ 0.88
CRTC3-208ENST00000560098 RRP12Q5JTH9 1297 aaKnown RBP20.53■□□□□ 0.88
CRTC3-208ENST00000560098 IQSEC1Q6DN90 963 aa20.53■□□□□ 0.88
CRTC3-208ENST00000560098 CXCL17Q6UXB2 119 aa20.53■□□□□ 0.88
CRTC3-208ENST00000560098 AP5M1Q9H0R1 490 aa20.53■□□□□ 0.88
CRTC3-208ENST00000560098 DDX49Q9Y6V7 483 aaKnown RBP20.53■□□□□ 0.88
CRTC3-208ENST00000560098 CABYRO75952 493 aa20.53■□□□□ 0.88
CRTC3-208ENST00000560098 CD4P01730 458 aa20.53■□□□□ 0.88
CRTC3-208ENST00000560098 FOSL2P15408 326 aa20.53■□□□□ 0.88
CRTC3-208ENST00000560098 SMPD1P17405 629 aa20.53■□□□□ 0.88
CRTC3-208ENST00000560098 DNAJB2P25686 324 aa20.53■□□□□ 0.88
CRTC3-208ENST00000560098 SLC16A2P36021 539 aa20.53■□□□□ 0.88
CRTC3-208ENST00000560098 FSCN1Q16658 493 aaKnown RBP20.53■□□□□ 0.88
CRTC3-208ENST00000560098 TTBK2Q6IQ55 1244 aa20.53■□□□□ 0.88
CRTC3-208ENST00000560098 TAPT1Q6NXT6 567 aa20.53■□□□□ 0.88
CRTC3-208ENST00000560098 BTNL9Q6UXG8 535 aa20.53■□□□□ 0.88
CRTC3-208ENST00000560098 EEPD1Q7L9B9 569 aa20.53■□□□□ 0.88
CRTC3-208ENST00000560098 FBXO16Q8IX29 292 aaPredicted RBP20.53■□□□□ 0.88
CRTC3-208ENST00000560098 TMEM199Q8N511 208 aa20.53■□□□□ 0.88
CRTC3-208ENST00000560098 SLC43A3Q8NBI5 491 aa20.53■□□□□ 0.88
CRTC3-208ENST00000560098 TMEM47Q9BQJ4 181 aa20.53■□□□□ 0.88
CRTC3-208ENST00000560098 COL25A1Q9BXS0 654 aaPredicted RBP20.53■□□□□ 0.88
CRTC3-208ENST00000560098 PPP1R12CQ9BZL4 782 aa20.53■□□□□ 0.88
CRTC3-208ENST00000560098 PDGFCQ9NRA1 345 aa20.53■□□□□ 0.88
CRTC3-208ENST00000560098 TCP11L1Q9NUJ3 509 aa20.53■□□□□ 0.88
CRTC3-208ENST00000560098 ZMYM6O95789 1325 aa20.52■□□□□ 0.87
CRTC3-208ENST00000560098 DYNC1LI2O43237 492 aaPredicted RBP20.52■□□□□ 0.87
CRTC3-208ENST00000560098 ZEB2O60315 1214 aa20.52■□□□□ 0.87
CRTC3-208ENST00000560098 HSPD1P10809 573 aaKnown RBP20.52■□□□□ 0.87
CRTC3-208ENST00000560098 CSF2RAP15509 400 aa20.52■□□□□ 0.87
CRTC3-208ENST00000560098 TMEM240Q5SV17 173 aa20.52■□□□□ 0.87
CRTC3-208ENST00000560098 SYDE2Q5VT97 1194 aa20.52■□□□□ 0.87
CRTC3-208ENST00000560098 C16orf59Q7L2K0 433 aa20.52■□□□□ 0.87
CRTC3-208ENST00000560098 MORC4Q8TE76 937 aa20.52■□□□□ 0.87
CRTC3-208ENST00000560098 PURBQ96QR8 312 aaKnown RBP20.52■□□□□ 0.87
CRTC3-208ENST00000560098 VTA1Q9NP79 307 aa20.52■□□□□ 0.87
CRTC3-208ENST00000560098 Q9Y3F1 56 aa20.52■□□□□ 0.87
CRTC3-208ENST00000560098 FRMPD2Q68DX3 1309 aaPredicted RBP20.51■□□□□ 0.87
CRTC3-208ENST00000560098 LRRC37A2A6NM11 1700 aa20.51■□□□□ 0.87
CRTC3-208ENST00000560098 PTGS1P23219 599 aa20.51■□□□□ 0.87
CRTC3-208ENST00000560098 ZNF589Q86UQ0 364 aaPredicted RBP20.51■□□□□ 0.87
CRTC3-208ENST00000560098 NMIQ13287 307 aaPredicted RBP20.5■□□□□ 0.87
CRTC3-208ENST00000560098 ITGA7Q13683 1181 aa20.5■□□□□ 0.87
CRTC3-208ENST00000560098 BAATQ14032 418 aaPredicted RBP20.5■□□□□ 0.87
CRTC3-208ENST00000560098 PSRC1Q6PGN9 363 aaPredicted RBP20.5■□□□□ 0.87
CRTC3-208ENST00000560098 GPCPD1Q9NPB8 672 aa20.5■□□□□ 0.87
CRTC3-208ENST00000560098 ADD3Q9UEY8 706 aaKnown RBP20.5■□□□□ 0.87
CRTC3-208ENST00000560098 PRUNE2Q8WUY3 3088 aa20.5■□□□□ 0.87
CRTC3-208ENST00000560098 TRIM6-TRIM34B2RNG4 842 aa20.49■□□□□ 0.87
CRTC3-208ENST00000560098 NFIBO00712 420 aa20.49■□□□□ 0.87
CRTC3-208ENST00000560098 HAND2P61296 217 aa20.49■□□□□ 0.87
CRTC3-208ENST00000560098 GRIN2CQ14957 1233 aa20.49■□□□□ 0.87
CRTC3-208ENST00000560098 TMEM63BQ5T3F8 832 aa20.49■□□□□ 0.87
CRTC3-208ENST00000560098 RASIP1Q5U651 963 aa20.49■□□□□ 0.87
CRTC3-208ENST00000560098 KIAA1211Q6ZU35 1233 aa20.49■□□□□ 0.87
CRTC3-208ENST00000560098 TIFAQ96CG3 184 aa20.49■□□□□ 0.87
CRTC3-208ENST00000560098 SEZ6LQ9BYH1 1024 aa20.49■□□□□ 0.87
CRTC3-208ENST00000560098 LNPKQ9C0E8 428 aa20.49■□□□□ 0.87
CRTC3-208ENST00000560098 VCANP13611 3396 aa20.48■□□□□ 0.87
CRTC3-208ENST00000560098 GRIN2DO15399 1336 aa20.48■□□□□ 0.87
CRTC3-208ENST00000560098 CCDC171Q6TFL3 1326 aa20.48■□□□□ 0.87
CRTC3-208ENST00000560098 LOC102724159A0A0B4J2E5 919 aa20.48■□□□□ 0.87
CRTC3-208ENST00000560098 ACRP10323 421 aa20.48■□□□□ 0.87
CRTC3-208ENST00000560098 PDHBP11177 359 aa20.48■□□□□ 0.87
CRTC3-208ENST00000560098 PCP11498 1178 aaKnown RBP20.48■□□□□ 0.87
CRTC3-208ENST00000560098 CYP2C18P33260 490 aa20.48■□□□□ 0.87
CRTC3-208ENST00000560098 ALDH5A1P51649 535 aaPredicted RBP20.48■□□□□ 0.87
CRTC3-208ENST00000560098 PWP2Q15269 919 aaKnown RBP20.48■□□□□ 0.87
CRTC3-208ENST00000560098 ZNF365Q70YC5 407 aa20.48■□□□□ 0.87
CRTC3-208ENST00000560098 TTC14Q96N46 770 aa20.48■□□□□ 0.87
CRTC3-208ENST00000560098 HIPK3Q9H422 1215 aa20.48■□□□□ 0.87
CRTC3-208ENST00000560098 ZNF576Q9H609 170 aa20.48■□□□□ 0.87
CRTC3-208ENST00000560098 PNMA2Q9UL42 364 aa20.48■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms