RNA–Protein interactions for RNA: ENST00000558264.5

TPM1-210, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 2,687 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-210ENST00000558264 DESI2Q9BSY9 194 aa11.91□□□□□ -0.5
TPM1-210ENST00000558264 A0A1B0GTH6 734 aa11.9□□□□□ -0.5
TPM1-210ENST00000558264 CLRN2A0PK11 232 aa11.9□□□□□ -0.5
TPM1-210ENST00000558264 NRDCO43847 1150 aa11.9□□□□□ -0.5
TPM1-210ENST00000558264 GTF2F1P35269 517 aaKnown RBP eCLIP11.9□□□□□ -0.5
TPM1-210ENST00000558264 MTF1Q14872 753 aa11.9□□□□□ -0.5
TPM1-210ENST00000558264 ZNF658Q5TYW1 1059 aaPredicted RBP11.9□□□□□ -0.5
TPM1-210ENST00000558264 CDKAL1Q5VV42 579 aa11.9□□□□□ -0.5
TPM1-210ENST00000558264 TMEM139Q8IV31 216 aa11.9□□□□□ -0.5
TPM1-210ENST00000558264 QSER1Q2KHR3 1735 aa11.9□□□□□ -0.5
TPM1-210ENST00000558264 USP17L15C9J2P7 530 aa11.9□□□□□ -0.5
TPM1-210ENST00000558264 USP17L13C9JLJ4 530 aa11.9□□□□□ -0.5
TPM1-210ENST00000558264 USP17L11C9JVI0 530 aa11.9□□□□□ -0.5
TPM1-210ENST00000558264 USP17L18D6R9N7 530 aa11.9□□□□□ -0.5
TPM1-210ENST00000558264 USP17L22D6RA61 530 aa11.9□□□□□ -0.5
TPM1-210ENST00000558264 USP17L17D6RBQ6 530 aa11.9□□□□□ -0.5
TPM1-210ENST00000558264 USP17L19D6RCP7 530 aa11.9□□□□□ -0.5
TPM1-210ENST00000558264 USP17L20D6RJB6 530 aa11.9□□□□□ -0.5
TPM1-210ENST00000558264 USP17L24Q0WX57 530 aa11.9□□□□□ -0.5
TPM1-210ENST00000558264 TBX2Q13207 712 aaPredicted RBP11.9□□□□□ -0.5
TPM1-210ENST00000558264 CALCRLQ16602 461 aa11.9□□□□□ -0.5
TPM1-210ENST00000558264 STYK1Q6J9G0 422 aa11.9□□□□□ -0.5
TPM1-210ENST00000558264 USP17L6PQ6QN14 398 aa11.9□□□□□ -0.5
TPM1-210ENST00000558264 TOGARAM2Q6ZUX3 1019 aa11.9□□□□□ -0.5
TPM1-210ENST00000558264 PRMT6Q96LA8 375 aaPredicted RBP11.9□□□□□ -0.5
TPM1-210ENST00000558264 BAG1Q99933 345 aaPredicted RBP11.9□□□□□ -0.5
TPM1-210ENST00000558264 PNMA6FA0A0J9YX94 578 aa11.89□□□□□ -0.51
TPM1-210ENST00000558264 PES1O00541 588 aaKnown RBP11.89□□□□□ -0.51
TPM1-210ENST00000558264 MYO1BO43795 1136 aa11.89□□□□□ -0.51
TPM1-210ENST00000558264 RAD17O75943 681 aa11.89□□□□□ -0.51
TPM1-210ENST00000558264 SLC1A4P43007 532 aa11.89□□□□□ -0.51
TPM1-210ENST00000558264 RBL2Q08999 1139 aa11.89□□□□□ -0.51
TPM1-210ENST00000558264 KRT31Q15323 416 aa11.89□□□□□ -0.51
TPM1-210ENST00000558264 SPICE1Q8N0Z3 855 aa11.89□□□□□ -0.51
TPM1-210ENST00000558264 IGSF22Q8N9C0 903 aa11.89□□□□□ -0.51
TPM1-210ENST00000558264 NUDT12Q9BQG2 462 aa11.89□□□□□ -0.51
TPM1-210ENST00000558264 MMTAG2Q9BU76 263 aaKnown RBP11.89□□□□□ -0.51
TPM1-210ENST00000558264 ADD3Q9UEY8 706 aaKnown RBP11.89□□□□□ -0.51
TPM1-210ENST00000558264 SCAF8Q9UPN6 1271 aaKnown RBP11.89□□□□□ -0.51
TPM1-210ENST00000558264 TCP10L2B9ZVM9 353 aa11.89□□□□□ -0.51
TPM1-210ENST00000558264 KLRC4O43908 158 aa11.89□□□□□ -0.51
TPM1-210ENST00000558264 IKQ13123 557 aaPredicted RBP11.89□□□□□ -0.51
TPM1-210ENST00000558264 PYM1Q9BRP8 204 aaKnown RBP11.89□□□□□ -0.51
TPM1-210ENST00000558264 CCSER1Q9C0I3 900 aa11.89□□□□□ -0.51
TPM1-210ENST00000558264 FRMD4AQ9P2Q2 1039 aaPredicted RBP11.89□□□□□ -0.51
TPM1-210ENST00000558264 PI4KBQ9UBF8 816 aa11.89□□□□□ -0.51
TPM1-210ENST00000558264 ZBTB12Q9Y330 459 aaPredicted RBP11.89□□□□□ -0.51
TPM1-210ENST00000558264 FCER1AP12319 257 aa11.88□□□□□ -0.51
TPM1-210ENST00000558264 SMARCA1P28370 1054 aa11.88□□□□□ -0.51
TPM1-210ENST00000558264 PRPHP41219 470 aa11.88□□□□□ -0.51
TPM1-210ENST00000558264 ASIC1P78348 528 aa11.88□□□□□ -0.51
TPM1-210ENST00000558264 ICA1Q05084 483 aa11.88□□□□□ -0.51
TPM1-210ENST00000558264 RRP1BQ14684 758 aaKnown RBP11.88□□□□□ -0.51
TPM1-210ENST00000558264 QRICH1Q2TAL8 776 aa11.88□□□□□ -0.51
TPM1-210ENST00000558264 USH1GQ495M9 461 aa11.88□□□□□ -0.51
TPM1-210ENST00000558264 SLFN13Q68D06 897 aa11.88□□□□□ -0.51
TPM1-210ENST00000558264 POTEAQ6S8J7 498 aa11.88□□□□□ -0.51
TPM1-210ENST00000558264 SAMD1Q6SPF0 538 aaPredicted RBP11.88□□□□□ -0.51
TPM1-210ENST00000558264 SIAH1Q8IUQ4 282 aa11.88□□□□□ -0.51
TPM1-210ENST00000558264 C7orf43Q8WVR3 580 aa11.88□□□□□ -0.51
TPM1-210ENST00000558264 CNKSR1Q969H4 720 aa11.88□□□□□ -0.51
TPM1-210ENST00000558264 RMND1Q9NWS8 449 aa11.88□□□□□ -0.51
TPM1-210ENST00000558264 RWDD2AQ9UIY3 292 aa11.88□□□□□ -0.51
TPM1-210ENST00000558264 ESYT2A0FGR8 921 aa11.88□□□□□ -0.51
TPM1-210ENST00000558264 SOWAHDA6NJG2 315 aa11.88□□□□□ -0.51
TPM1-210ENST00000558264 KCNJ18B7U540 433 aa11.88□□□□□ -0.51
TPM1-210ENST00000558264 LAD1O00515 517 aa11.88□□□□□ -0.51
TPM1-210ENST00000558264 N4BP3O15049 544 aa11.88□□□□□ -0.51
TPM1-210ENST00000558264 ZBTB5O15062 677 aa11.88□□□□□ -0.51
TPM1-210ENST00000558264 KCNJ12Q14500 433 aa11.88□□□□□ -0.51
TPM1-210ENST00000558264 DYMQ7RTS9 669 aa11.88□□□□□ -0.51
TPM1-210ENST00000558264 ZNF277Q9NRM2 450 aaPredicted RBP11.88□□□□□ -0.51
TPM1-210ENST00000558264 KBTBD4Q9NVX7 518 aa11.88□□□□□ -0.51
TPM1-210ENST00000558264 STK32BQ9NY57 414 aa11.88□□□□□ -0.51
TPM1-210ENST00000558264 LRWD1Q9UFC0 647 aa11.88□□□□□ -0.51
TPM1-210ENST00000558264 PAXBP1Q9Y5B6 917 aa11.88□□□□□ -0.51
TPM1-210ENST00000558264 MYH4Q9Y623 1939 aa11.87□□□□□ -0.51
TPM1-210ENST00000558264 A0A0U1RQJ8 604 aa11.87□□□□□ -0.51
TPM1-210ENST00000558264 GH2P01242 217 aa11.87□□□□□ -0.51
TPM1-210ENST00000558264 CASP14P31944 242 aa11.87□□□□□ -0.51
TPM1-210ENST00000558264 PDE4DQ08499 809 aa11.87□□□□□ -0.51
TPM1-210ENST00000558264 MCM6Q14566 821 aa11.87□□□□□ -0.51
TPM1-210ENST00000558264 DEFB132Q7Z7B7 95 aa11.87□□□□□ -0.51
TPM1-210ENST00000558264 CDAN1Q8IWY9 1227 aa11.87□□□□□ -0.51
TPM1-210ENST00000558264 KIF18AQ8NI77 898 aa11.87□□□□□ -0.51
TPM1-210ENST00000558264 ATRIPQ8WXE1 791 aa11.87□□□□□ -0.51
TPM1-210ENST00000558264 PSTPIP2Q9H939 334 aa11.87□□□□□ -0.51
TPM1-210ENST00000558264 DNAI1Q9UI46 699 aa11.87□□□□□ -0.51
TPM1-210ENST00000558264 PSDA5PKW4 1024 aaPredicted RBP11.87□□□□□ -0.51
TPM1-210ENST00000558264 FANCGO15287 622 aa11.87□□□□□ -0.51
TPM1-210ENST00000558264 FXR1P51114 621 aaKnown RBP eCLIP11.87□□□□□ -0.51
TPM1-210ENST00000558264 STK4Q13043 487 aa11.87□□□□□ -0.51
TPM1-210ENST00000558264 CDC37Q16543 378 aaPredicted RBP11.87□□□□□ -0.51
TPM1-210ENST00000558264 GPATCH4Q5T3I0 446 aaKnown RBP11.87□□□□□ -0.51
TPM1-210ENST00000558264 ADSSL1Q8N142 457 aa11.87□□□□□ -0.51
TPM1-210ENST00000558264 LRRN4CLQ8ND94 238 aa11.87□□□□□ -0.51
TPM1-210ENST00000558264 CUL5Q93034 780 aa11.87□□□□□ -0.51
TPM1-210ENST00000558264 TRIM47Q96LD4 638 aa11.87□□□□□ -0.51
TPM1-210ENST00000558264 MTMR9Q96QG7 549 aa11.87□□□□□ -0.51
TPM1-210ENST00000558264 CSRNP1Q96S65 589 aa11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms