RNA–Protein interactions for RNA: ENST00000552839.6

TMEM116-218, Transcript of transmembrane protein 116, humanhuman

TSL 4

Gene TMEM116, Length 511 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM116-218ENST00000552839 SNAI1O95863 264 aaPredicted RBP13.33□□□□□ -0.28
TMEM116-218ENST00000552839 EEF2P13639 858 aaKnown RBP13.33□□□□□ -0.28
TMEM116-218ENST00000552839 CSF2RAP15509 400 aa13.33□□□□□ -0.28
TMEM116-218ENST00000552839 PSMA5P28066 241 aa13.33□□□□□ -0.28
TMEM116-218ENST00000552839 NT5C2P49902 561 aa13.33□□□□□ -0.28
TMEM116-218ENST00000552839 CDK7P50613 346 aa13.33□□□□□ -0.28
TMEM116-218ENST00000552839 PPIGQ13427 754 aaKnown RBP eCLIP13.33□□□□□ -0.28
TMEM116-218ENST00000552839 ADGRE1Q14246 886 aa13.33□□□□□ -0.28
TMEM116-218ENST00000552839 IQCA1Q86XH1 822 aa13.33□□□□□ -0.28
TMEM116-218ENST00000552839 ASB2Q96Q27 587 aa13.33□□□□□ -0.28
TMEM116-218ENST00000552839 UBAC1Q9BSL1 405 aa13.33□□□□□ -0.28
TMEM116-218ENST00000552839 THEGQ9P2T0 379 aa13.33□□□□□ -0.28
TMEM116-218ENST00000552839 FAM184BQ9ULE4 1060 aa13.33□□□□□ -0.28
TMEM116-218ENST00000552839 PPP1R9AQ9ULJ8 1098 aa13.33□□□□□ -0.28
TMEM116-218ENST00000552839 NEDD4P46934 1319 aa13.33□□□□□ -0.28
TMEM116-218ENST00000552839 E7EWF7 191 aa13.32□□□□□ -0.28
TMEM116-218ENST00000552839 ORC4O43929 436 aa13.32□□□□□ -0.28
TMEM116-218ENST00000552839 RAD21O60216 631 aa13.32□□□□□ -0.28
TMEM116-218ENST00000552839 HSPA4P34932 840 aa13.32□□□□□ -0.28
TMEM116-218ENST00000552839 TFAP4Q01664 338 aa13.32□□□□□ -0.28
TMEM116-218ENST00000552839 FAM83BQ5T0W9 1011 aa13.32□□□□□ -0.28
TMEM116-218ENST00000552839 ZNF365Q70YC5 407 aa13.32□□□□□ -0.28
TMEM116-218ENST00000552839 MSL3Q8N5Y2 521 aaKnown RBP13.32□□□□□ -0.28
TMEM116-218ENST00000552839 JAKMIP1Q96N16 626 aaKnown RBP13.32□□□□□ -0.28
TMEM116-218ENST00000552839 USP26Q9BXU7 913 aa13.32□□□□□ -0.28
TMEM116-218ENST00000552839 C22orf23Q9BZE7 217 aa13.32□□□□□ -0.28
TMEM116-218ENST00000552839 ISY1Q9ULR0 285 aaKnown RBP13.32□□□□□ -0.28
TMEM116-218ENST00000552839 ELP1O95163 1332 aa13.32□□□□□ -0.28
TMEM116-218ENST00000552839 MROH7Q68CQ1 1323 aa13.32□□□□□ -0.28
TMEM116-218ENST00000552839 SYNGAP1Q96PV0 1343 aa13.32□□□□□ -0.28
TMEM116-218ENST00000552839 GREB1LQ9C091 1923 aaPredicted RBP13.31□□□□□ -0.28
TMEM116-218ENST00000552839 DNAJC25-GNG10A0A024R161 153 aa13.31□□□□□ -0.28
TMEM116-218ENST00000552839 B4E1Z4 1266 aa13.31□□□□□ -0.28
TMEM116-218ENST00000552839 ADCY6O43306 1168 aa13.31□□□□□ -0.28
TMEM116-218ENST00000552839 KDM4AO75164 1064 aa13.31□□□□□ -0.28
TMEM116-218ENST00000552839 DUSP11O75319 330 aaKnown RBP13.31□□□□□ -0.28
TMEM116-218ENST00000552839 ASGR1P07306 291 aa13.31□□□□□ -0.28
TMEM116-218ENST00000552839 HMGB1P09429 215 aaKnown RBP13.31□□□□□ -0.28
TMEM116-218ENST00000552839 ACRP10323 421 aa13.31□□□□□ -0.28
TMEM116-218ENST00000552839 RASA1P20936 1047 aa13.31□□□□□ -0.28
TMEM116-218ENST00000552839 CST5P28325 142 aaPredicted RBP13.31□□□□□ -0.28
TMEM116-218ENST00000552839 COPB2P35606 906 aa13.31□□□□□ -0.28
TMEM116-218ENST00000552839 NECTIN1Q15223 517 aa13.31□□□□□ -0.28
TMEM116-218ENST00000552839 CCDC85BQ15834 202 aaPredicted RBP13.31□□□□□ -0.28
TMEM116-218ENST00000552839 CCDC178Q5BJE1 867 aa13.31□□□□□ -0.28
TMEM116-218ENST00000552839 BLOC1S2Q6QNY1 142 aa13.31□□□□□ -0.28
TMEM116-218ENST00000552839 MAMDC4Q6UXC1 1216 aa13.31□□□□□ -0.28
TMEM116-218ENST00000552839 ADAMTS19Q8TE59 1207 aa13.31□□□□□ -0.28
TMEM116-218ENST00000552839 GLT1D1Q96MS3 346 aa13.31□□□□□ -0.28
TMEM116-218ENST00000552839 BACH2Q9BYV9 841 aa13.31□□□□□ -0.28
TMEM116-218ENST00000552839 PPP1R12CQ9BZL4 782 aa13.31□□□□□ -0.28
TMEM116-218ENST00000552839 KANSL2Q9H9L4 492 aa13.31□□□□□ -0.28
TMEM116-218ENST00000552839 GOPCQ9HD26 462 aa13.31□□□□□ -0.28
TMEM116-218ENST00000552839 ZHX1Q9UKY1 873 aaPredicted RBP13.31□□□□□ -0.28
TMEM116-218ENST00000552839 RIPK3Q9Y572 518 aa13.31□□□□□ -0.28
TMEM116-218ENST00000552839 ARVCFO00192 962 aa13.3□□□□□ -0.28
TMEM116-218ENST00000552839 C6orf222P0C671 652 aaPredicted RBP13.3□□□□□ -0.28
TMEM116-218ENST00000552839 MRPS5P82675 430 aaKnown RBP13.3□□□□□ -0.28
TMEM116-218ENST00000552839 CCDC174Q6PII3 467 aa13.3□□□□□ -0.28
TMEM116-218ENST00000552839 FAM126BQ8IXS8 530 aa13.3□□□□□ -0.28
TMEM116-218ENST00000552839 TMEM199Q8N511 208 aa13.3□□□□□ -0.28
TMEM116-218ENST00000552839 VTI1AQ96AJ9 217 aa13.3□□□□□ -0.28
TMEM116-218ENST00000552839 DDX11Q96FC9 970 aa13.3□□□□□ -0.28
TMEM116-218ENST00000552839 NEK1Q96PY6 1258 aa13.3□□□□□ -0.28
TMEM116-218ENST00000552839 STX8Q9UNK0 236 aa13.3□□□□□ -0.28
TMEM116-218ENST00000552839 DDX52Q9Y2R4 599 aaKnown RBP eCLIP13.3□□□□□ -0.28
TMEM116-218ENST00000552839 MYH4Q9Y623 1939 aa13.3□□□□□ -0.28
TMEM116-218ENST00000552839 A0A0U1RQG5 324 aaPredicted RBP13.29□□□□□ -0.28
TMEM116-218ENST00000552839 SEC24BO95487 1268 aa13.29□□□□□ -0.28
TMEM116-218ENST00000552839 CASTP20810 708 aaKnown RBP13.29□□□□□ -0.28
TMEM116-218ENST00000552839 IGFBP4P22692 258 aa13.29□□□□□ -0.28
TMEM116-218ENST00000552839 MCM5P33992 734 aa13.29□□□□□ -0.28
TMEM116-218ENST00000552839 ANAPC15P60006 121 aa13.29□□□□□ -0.28
TMEM116-218ENST00000552839 ACVR2BQ13705 512 aa13.29□□□□□ -0.28
TMEM116-218ENST00000552839 SNRNP48Q6IEG0 339 aaKnown RBP13.29□□□□□ -0.28
TMEM116-218ENST00000552839 PSRC1Q6PGN9 363 aaPredicted RBP13.29□□□□□ -0.28
TMEM116-218ENST00000552839 NFXL1Q6ZNB6 911 aa13.29□□□□□ -0.28
TMEM116-218ENST00000552839 PCSK9Q8NBP7 692 aaKnown RBP13.29□□□□□ -0.28
TMEM116-218ENST00000552839 UHRF1Q96T88 793 aaPredicted RBP13.29□□□□□ -0.28
TMEM116-218ENST00000552839 NUP88Q99567 741 aaPredicted RBP13.29□□□□□ -0.28
TMEM116-218ENST00000552839 TEX13BQ9BXU2 312 aa13.29□□□□□ -0.28
TMEM116-218ENST00000552839 UPF3AQ9H1J1 476 aaKnown RBP13.29□□□□□ -0.28
TMEM116-218ENST00000552839 NKX2-4Q9H2Z4 354 aa13.29□□□□□ -0.28
TMEM116-218ENST00000552839 INCENPQ9NQS7 918 aa13.29□□□□□ -0.28
TMEM116-218ENST00000552839 CDKN2AIPQ9NXV6 580 aaPredicted RBP13.29□□□□□ -0.28
TMEM116-218ENST00000552839 CXXC1Q9P0U4 656 aaPredicted RBP13.29□□□□□ -0.28
TMEM116-218ENST00000552839 SNX14Q9Y5W7 946 aa13.29□□□□□ -0.28
TMEM116-218ENST00000552839 IFIT3O14879 490 aaKnown RBP13.28□□□□□ -0.28
TMEM116-218ENST00000552839 PRC1O43663 620 aa13.28□□□□□ -0.28
TMEM116-218ENST00000552839 CD4P01730 458 aa13.28□□□□□ -0.28
TMEM116-218ENST00000552839 CYP2C18P33260 490 aa13.28□□□□□ -0.28
TMEM116-218ENST00000552839 GJA9P57773 515 aa13.28□□□□□ -0.28
TMEM116-218ENST00000552839 RAB30Q15771 203 aa13.28□□□□□ -0.28
TMEM116-218ENST00000552839 CCDC144BQ3MJ40 725 aa13.28□□□□□ -0.28
TMEM116-218ENST00000552839 GNASQ5JWF2 1037 aa13.28□□□□□ -0.28
TMEM116-218ENST00000552839 ZNF467Q7Z7K2 595 aaPredicted RBP13.28□□□□□ -0.28
TMEM116-218ENST00000552839 NEDD1Q8NHV4 660 aa13.28□□□□□ -0.28
TMEM116-218ENST00000552839 HERVK_113Q902F9 699 aa13.28□□□□□ -0.28
TMEM116-218ENST00000552839 FGD4Q96M96 766 aa13.28□□□□□ -0.28
TMEM116-218ENST00000552839 SLF1Q9BQI6 1058 aa13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 75 ms