RNA–Protein interactions for RNA: ENST00000551320.1

PRPF40B-214, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 2

Gene PRPF40B, Length 455 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-214ENST00000551320 BEX3Q00994 111 aa8.21□□□□□ -1.1
PRPF40B-214ENST00000551320 CNTN2Q02246 1040 aa8.21□□□□□ -1.1
PRPF40B-214ENST00000551320 ZNF792Q3KQV3 632 aa8.21□□□□□ -1.1
PRPF40B-214ENST00000551320 SNRNP48Q6IEG0 339 aaKnown RBP8.21□□□□□ -1.1
PRPF40B-214ENST00000551320 CCDC129Q6ZRS4 1044 aa8.21□□□□□ -1.1
PRPF40B-214ENST00000551320 C16orf86Q6ZW13 317 aa8.21□□□□□ -1.1
PRPF40B-214ENST00000551320 RDH13Q8NBN7 331 aa8.21□□□□□ -1.1
PRPF40B-214ENST00000551320 ARRDC4Q8NCT1 418 aa8.21□□□□□ -1.1
PRPF40B-214ENST00000551320 STRBPQ96SI9 672 aaKnown RBP8.21□□□□□ -1.1
PRPF40B-214ENST00000551320 TINF2Q9BSI4 451 aa8.21□□□□□ -1.1
PRPF40B-214ENST00000551320 CLIP2Q9UDT6 1046 aa8.21□□□□□ -1.1
PRPF40B-214ENST00000551320 RAPGEFL1Q9UHV5 662 aa8.21□□□□□ -1.1
PRPF40B-214ENST00000551320 ZHX1Q9UKY1 873 aaPredicted RBP8.21□□□□□ -1.1
PRPF40B-214ENST00000551320 ZNF214Q9UL59 606 aaPredicted RBP8.21□□□□□ -1.1
PRPF40B-214ENST00000551320 TACC3Q9Y6A5 838 aa8.21□□□□□ -1.1
PRPF40B-214ENST00000551320 MYH8P13535 1937 aa8.21□□□□□ -1.1
PRPF40B-214ENST00000551320 PARP14Q460N5 1801 aa8.2□□□□□ -1.1
PRPF40B-214ENST00000551320 C11orf97A0A1B0GVM6 126 aaPredicted RBP8.2□□□□□ -1.1
PRPF40B-214ENST00000551320 WDR46O15213 610 aaKnown RBP8.2□□□□□ -1.1
PRPF40B-214ENST00000551320 STRNO43815 780 aa8.2□□□□□ -1.1
PRPF40B-214ENST00000551320 NMT2O60551 498 aa8.2□□□□□ -1.1
PRPF40B-214ENST00000551320 RNF40O75150 1001 aa8.2□□□□□ -1.1
PRPF40B-214ENST00000551320 FAAP100Q0VG06 881 aa8.2□□□□□ -1.1
PRPF40B-214ENST00000551320 KCTD2Q14681 263 aa8.2□□□□□ -1.1
PRPF40B-214ENST00000551320 GRIN2CQ14957 1233 aa8.2□□□□□ -1.1
PRPF40B-214ENST00000551320 KCNA10Q16322 511 aa8.2□□□□□ -1.1
PRPF40B-214ENST00000551320 ZNF697Q5TEC3 545 aa8.2□□□□□ -1.1
PRPF40B-214ENST00000551320 RIOX2Q8IUF8 465 aa8.2□□□□□ -1.1
PRPF40B-214ENST00000551320 SHCBP1Q8NEM2 672 aa8.2□□□□□ -1.1
PRPF40B-214ENST00000551320 MAFAQ8NHW3 353 aaPredicted RBP8.2□□□□□ -1.1
PRPF40B-214ENST00000551320 VTI1AQ96AJ9 217 aa8.2□□□□□ -1.1
PRPF40B-214ENST00000551320 RNPC3Q96LT9 517 aaKnown RBP8.2□□□□□ -1.1
PRPF40B-214ENST00000551320 FGD4Q96M96 766 aa8.2□□□□□ -1.1
PRPF40B-214ENST00000551320 PPP1R12CQ9BZL4 782 aa8.2□□□□□ -1.1
PRPF40B-214ENST00000551320 MROH8Q9H579 483 aa8.2□□□□□ -1.1
PRPF40B-214ENST00000551320 ATP8A2Q9NTI2 1148 aa8.2□□□□□ -1.1
PRPF40B-214ENST00000551320 SWAP70Q9UH65 585 aa8.2□□□□□ -1.1
PRPF40B-214ENST00000551320 PPP1R9AQ9ULJ8 1098 aa8.2□□□□□ -1.1
PRPF40B-214ENST00000551320 ADAMTS5Q9UNA0 930 aa8.2□□□□□ -1.1
PRPF40B-214ENST00000551320 MCM3APO60318 1980 aa8.2□□□□□ -1.1
PRPF40B-214ENST00000551320 SYNRGQ9UMZ2 1314 aa8.2□□□□□ -1.1
PRPF40B-214ENST00000551320 MYO9BQ13459 2157 aa8.2□□□□□ -1.1
PRPF40B-214ENST00000551320 F5H6K3 240 aa8.19□□□□□ -1.1
PRPF40B-214ENST00000551320 APPP05067 770 aa8.19□□□□□ -1.1
PRPF40B-214ENST00000551320 CLTBP09497 229 aa8.19□□□□□ -1.1
PRPF40B-214ENST00000551320 RARBP10826 455 aa8.19□□□□□ -1.1
PRPF40B-214ENST00000551320 KLRC3Q07444 240 aa8.19□□□□□ -1.1
PRPF40B-214ENST00000551320 HSP90AB4PQ58FF6 505 aa8.19□□□□□ -1.1
PRPF40B-214ENST00000551320 CCDC174Q6PII3 467 aa8.19□□□□□ -1.1
PRPF40B-214ENST00000551320 C16orf59Q7L2K0 433 aa8.19□□□□□ -1.1
PRPF40B-214ENST00000551320 EEPD1Q7L9B9 569 aa8.19□□□□□ -1.1
PRPF40B-214ENST00000551320 RPAP2Q8IXW5 612 aaPredicted RBP8.19□□□□□ -1.1
PRPF40B-214ENST00000551320 PPIL4Q8WUA2 492 aaKnown RBP eCLIP8.19□□□□□ -1.1
PRPF40B-214ENST00000551320 CEP95Q96GE4 821 aa8.19□□□□□ -1.1
PRPF40B-214ENST00000551320 AGBL1Q96MI9 1066 aa8.19□□□□□ -1.1
PRPF40B-214ENST00000551320 LRRCC1Q9C099 1032 aa8.19□□□□□ -1.1
PRPF40B-214ENST00000551320 KANSL2Q9H9L4 492 aa8.19□□□□□ -1.1
PRPF40B-214ENST00000551320 MKNK2Q9HBH9 465 aa8.19□□□□□ -1.1
PRPF40B-214ENST00000551320 TMEM39AQ9NV64 488 aa8.19□□□□□ -1.1
PRPF40B-214ENST00000551320 PHF24Q9UPV7 400 aa8.19□□□□□ -1.1
PRPF40B-214ENST00000551320 GTF3C3Q9Y5Q9 886 aa8.19□□□□□ -1.1
PRPF40B-214ENST00000551320 UMODL1Q5DID0 1318 aa8.19□□□□□ -1.1
PRPF40B-214ENST00000551320 ZBED9Q6R2W3 1325 aa8.19□□□□□ -1.1
PRPF40B-214ENST00000551320 PLXNA1Q9UIW2 1896 aa8.19□□□□□ -1.1
PRPF40B-214ENST00000551320 GOLGA8CPA6NN73 597 aa8.18□□□□□ -1.1
PRPF40B-214ENST00000551320 GPAA1O43292 621 aa8.18□□□□□ -1.1
PRPF40B-214ENST00000551320 MSCO60682 206 aa8.18□□□□□ -1.1
PRPF40B-214ENST00000551320 RAB11FIP3O75154 756 aa8.18□□□□□ -1.1
PRPF40B-214ENST00000551320 ADAMTS4O75173 837 aa8.18□□□□□ -1.1
PRPF40B-214ENST00000551320 HMMRO75330 724 aa8.18□□□□□ -1.1
PRPF40B-214ENST00000551320 C6orf222P0C671 652 aaPredicted RBP8.18□□□□□ -1.1
PRPF40B-214ENST00000551320 RAG1P15918 1043 aa8.18□□□□□ -1.1
PRPF40B-214ENST00000551320 CAPN2P17655 700 aa8.18□□□□□ -1.1
PRPF40B-214ENST00000551320 CYP2C18P33260 490 aa8.18□□□□□ -1.1
PRPF40B-214ENST00000551320 ACLYP53396 1101 aa8.18□□□□□ -1.1
PRPF40B-214ENST00000551320 CTDSPL2Q05D32 466 aa8.18□□□□□ -1.1
PRPF40B-214ENST00000551320 SNX17Q15036 470 aa8.18□□□□□ -1.1
PRPF40B-214ENST00000551320 UBE3CQ15386 1083 aa8.18□□□□□ -1.1
PRPF40B-214ENST00000551320 CCDC85BQ15834 202 aaPredicted RBP8.18□□□□□ -1.1
PRPF40B-214ENST00000551320 CERS3Q8IU89 383 aa8.18□□□□□ -1.1
PRPF40B-214ENST00000551320 MB21D1Q8N884 522 aa8.18□□□□□ -1.1
PRPF40B-214ENST00000551320 DDX11Q96FC9 970 aa8.18□□□□□ -1.1
PRPF40B-214ENST00000551320 CCDC17Q96LX7 622 aa8.18□□□□□ -1.1
PRPF40B-214ENST00000551320 SLF1Q9BQI6 1058 aa8.18□□□□□ -1.1
PRPF40B-214ENST00000551320 BUD13Q9BRD0 619 aaKnown RBP eCLIP8.18□□□□□ -1.1
PRPF40B-214ENST00000551320 DDX24Q9GZR7 859 aaKnown RBP eCLIP8.18□□□□□ -1.1
PRPF40B-214ENST00000551320 GOPCQ9HD26 462 aa8.18□□□□□ -1.1
PRPF40B-214ENST00000551320 PDGFCQ9NRA1 345 aa8.18□□□□□ -1.1
PRPF40B-214ENST00000551320 RCAN3Q9UKA8 241 aa8.18□□□□□ -1.1
PRPF40B-214ENST00000551320 DDX19BQ9UMR2 479 aa8.18□□□□□ -1.1
PRPF40B-214ENST00000551320 ASTN1O14525 1302 aa8.18□□□□□ -1.1
PRPF40B-214ENST00000551320 MUC3AQ02505 3323 aa8.18□□□□□ -1.1
PRPF40B-214ENST00000551320 ZNF236Q9UL36 1845 aa8.17□□□□□ -1.1
PRPF40B-214ENST00000551320 IGKV6D-41A0A0C4DH26 115 aa8.17□□□□□ -1.1
PRPF40B-214ENST00000551320 SOWAHBA6NEL2 793 aa8.17□□□□□ -1.1
PRPF40B-214ENST00000551320 TMEM232C9JQI7 657 aa8.17□□□□□ -1.1
PRPF40B-214ENST00000551320 FOXP2O15409 715 aa8.17□□□□□ -1.1
PRPF40B-214ENST00000551320 RNF113AO15541 343 aaKnown RBP8.17□□□□□ -1.1
PRPF40B-214ENST00000551320 SLC25A27O95847 323 aa8.17□□□□□ -1.1
PRPF40B-214ENST00000551320 MYOGP15173 224 aa8.17□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 56.9 ms