RNA–Protein interactions for RNA: ENST00000550418.5

RBFOX1-212, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 1 (best) BASIC

Gene RBFOX1, Length 4,775 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-212ENST00000550418 TNKSO95271 1327 aa17.33■□□□□ 0.36
RBFOX1-212ENST00000550418 DHTKD1Q96HY7 919 aaPredicted RBP17.33■□□□□ 0.36
RBFOX1-212ENST00000550418 NUF2Q9BZD4 464 aa17.33■□□□□ 0.36
RBFOX1-212ENST00000550418 GLT8D2Q9H1C3 349 aa17.33■□□□□ 0.36
RBFOX1-212ENST00000550418 JAG2Q9Y219 1238 aa17.33■□□□□ 0.36
RBFOX1-212ENST00000550418 MAP3K4Q9Y6R4 1608 aa17.33■□□□□ 0.36
RBFOX1-212ENST00000550418 ARAP3Q8WWN8 1544 aa17.33■□□□□ 0.36
RBFOX1-212ENST00000550418 GCNT3O95395 438 aa17.32■□□□□ 0.36
RBFOX1-212ENST00000550418 FAM98CQ17RN3 349 aaKnown RBP17.32■□□□□ 0.36
RBFOX1-212ENST00000550418 PPP1R21Q6ZMI0 780 aa17.32■□□□□ 0.36
RBFOX1-212ENST00000550418 NCAPGQ9BPX3 1015 aa17.32■□□□□ 0.36
RBFOX1-212ENST00000550418 RNF17Q9BXT8 1623 aaKnown RBP17.32■□□□□ 0.36
RBFOX1-212ENST00000550418 TMEM232C9JQI7 657 aa17.32■□□□□ 0.36
RBFOX1-212ENST00000550418 F8W031 263 aaPredicted RBP17.32■□□□□ 0.36
RBFOX1-212ENST00000550418 PDE6AP16499 860 aa17.32■□□□□ 0.36
RBFOX1-212ENST00000550418 ADCY8P40145 1251 aa17.32■□□□□ 0.36
RBFOX1-212ENST00000550418 VPS41P49754 854 aa17.32■□□□□ 0.36
RBFOX1-212ENST00000550418 NHEJ1Q9H9Q4 299 aaPredicted RBP17.32■□□□□ 0.36
RBFOX1-212ENST00000550418 DAAM1Q9Y4D1 1078 aa17.32■□□□□ 0.36
RBFOX1-212ENST00000550418 CROCC2H7BZ55 1655 aa17.32■□□□□ 0.36
RBFOX1-212ENST00000550418 ARHGAP42A6NI28 874 aa17.32■□□□□ 0.36
RBFOX1-212ENST00000550418 PGRMC1O00264 195 aaKnown RBP17.32■□□□□ 0.36
RBFOX1-212ENST00000550418 NDC80O14777 642 aa17.32■□□□□ 0.36
RBFOX1-212ENST00000550418 PDE8AO60658 829 aa17.32■□□□□ 0.36
RBFOX1-212ENST00000550418 MOCS3O95396 460 aa17.32■□□□□ 0.36
RBFOX1-212ENST00000550418 PSMD6Q15008 389 aa17.32■□□□□ 0.36
RBFOX1-212ENST00000550418 NBPF9Q3BBW0 867 aa17.32■□□□□ 0.36
RBFOX1-212ENST00000550418 GBP7Q8N8V2 638 aaPredicted RBP17.32■□□□□ 0.36
RBFOX1-212ENST00000550418 FNBP1Q96RU3 617 aa17.32■□□□□ 0.36
RBFOX1-212ENST00000550418 MRPL44Q9H9J2 332 aaKnown RBP17.32■□□□□ 0.36
RBFOX1-212ENST00000550418 RWDD2AQ9UIY3 292 aa17.32■□□□□ 0.36
RBFOX1-212ENST00000550418 USTQ9Y2C2 406 aa17.32■□□□□ 0.36
RBFOX1-212ENST00000550418 MRFAP1Q9Y605 127 aa17.32■□□□□ 0.36
RBFOX1-212ENST00000550418 MED23Q9ULK4 1368 aa17.32■□□□□ 0.36
RBFOX1-212ENST00000550418 ITIH3Q06033 890 aa17.32■□□□□ 0.36
RBFOX1-212ENST00000550418 ZNF658Q5TYW1 1059 aaPredicted RBP17.32■□□□□ 0.36
RBFOX1-212ENST00000550418 FMR1NBQ8N0W7 255 aaPredicted RBP17.32■□□□□ 0.36
RBFOX1-212ENST00000550418 SCG2P13521 617 aa17.31■□□□□ 0.36
RBFOX1-212ENST00000550418 MAP3K21Q5TCX8 1036 aa17.31■□□□□ 0.36
RBFOX1-212ENST00000550418 ZNF710Q8N1W2 664 aa17.31■□□□□ 0.36
RBFOX1-212ENST00000550418 LRRC8CQ8TDW0 803 aa17.31■□□□□ 0.36
RBFOX1-212ENST00000550418 CCDC97Q96F63 343 aaPredicted RBP17.31■□□□□ 0.36
RBFOX1-212ENST00000550418 VCX3AQ9NNX9 186 aa17.31■□□□□ 0.36
RBFOX1-212ENST00000550418 TYW1Q9NV66 732 aaKnown RBP17.31■□□□□ 0.36
RBFOX1-212ENST00000550418 NOP53Q9NZM5 478 aaKnown RBP17.31■□□□□ 0.36
RBFOX1-212ENST00000550418 TECP42680 631 aa17.31■□□□□ 0.36
RBFOX1-212ENST00000550418 IL9RQ01113 521 aa17.31■□□□□ 0.36
RBFOX1-212ENST00000550418 SMC1BQ8NDV3 1235 aa17.31■□□□□ 0.36
RBFOX1-212ENST00000550418 USP6P35125 1406 aa17.31■□□□□ 0.36
RBFOX1-212ENST00000550418 OR52Z1P0C646 297 aa17.31■□□□□ 0.36
RBFOX1-212ENST00000550418 ARL1P40616 181 aaPredicted RBP17.31■□□□□ 0.36
RBFOX1-212ENST00000550418 SLMAPQ14BN4 828 aa17.31■□□□□ 0.36
RBFOX1-212ENST00000550418 ARMCX5Q6P1M9 558 aa17.31■□□□□ 0.36
RBFOX1-212ENST00000550418 CCHCR1Q8TD31 782 aa17.31■□□□□ 0.36
RBFOX1-212ENST00000550418 ZSCAN10Q96SZ4 725 aaPredicted RBP17.31■□□□□ 0.36
RBFOX1-212ENST00000550418 GOLPH3LQ9H4A5 285 aa17.31■□□□□ 0.36
RBFOX1-212ENST00000550418 ZBTB21Q9ULJ3 1066 aa17.31■□□□□ 0.36
RBFOX1-212ENST00000550418 NFU1Q9UMS0 254 aa17.31■□□□□ 0.36
RBFOX1-212ENST00000550418 SH3TC1Q8TE82 1336 aa17.31■□□□□ 0.36
RBFOX1-212ENST00000550418 PCDH11XQ9BZA7 1347 aa17.31■□□□□ 0.36
RBFOX1-212ENST00000550418 PCDH11YQ9BZA8 1340 aa17.31■□□□□ 0.36
RBFOX1-212ENST00000550418 AATKQ6ZMQ8 1374 aa17.31■□□□□ 0.36
RBFOX1-212ENST00000550418 WDR78Q5VTH9 848 aa17.31■□□□□ 0.36
RBFOX1-212ENST00000550418 TBC1D1Q86TI0 1168 aaPredicted RBP17.31■□□□□ 0.36
RBFOX1-212ENST00000550418 SETDB2Q96T68 719 aa17.31■□□□□ 0.36
RBFOX1-212ENST00000550418 PASKQ96RG2 1323 aa17.3■□□□□ 0.36
RBFOX1-212ENST00000550418 PFDN1O60925 122 aa17.3■□□□□ 0.36
RBFOX1-212ENST00000550418 COG7P83436 770 aa17.3■□□□□ 0.36
RBFOX1-212ENST00000550418 TOB2Q14106 344 aaPredicted RBP17.3■□□□□ 0.36
RBFOX1-212ENST00000550418 MYCT1Q8N699 235 aa17.3■□□□□ 0.36
RBFOX1-212ENST00000550418 P2RX5Q93086 422 aa17.3■□□□□ 0.36
RBFOX1-212ENST00000550418 BCAP29Q9UHQ4 241 aa17.3■□□□□ 0.36
RBFOX1-212ENST00000550418 RTCBQ9Y3I0 505 aaKnown RBP17.3■□□□□ 0.36
RBFOX1-212ENST00000550418 NLRP1Q9C000 1473 aa17.3■□□□□ 0.36
RBFOX1-212ENST00000550418 SMCO2A6NFE2 343 aa17.3■□□□□ 0.36
RBFOX1-212ENST00000550418 TFAP4Q01664 338 aa17.3■□□□□ 0.36
RBFOX1-212ENST00000550418 DPH6Q7L8W6 267 aa17.3■□□□□ 0.36
RBFOX1-212ENST00000550418 GRK7Q8WTQ7 553 aa17.3■□□□□ 0.36
RBFOX1-212ENST00000550418 SAAL1Q96ER3 474 aa17.3■□□□□ 0.36
RBFOX1-212ENST00000550418 MAGEF1Q9HAY2 307 aa17.3■□□□□ 0.36
RBFOX1-212ENST00000550418 BZW2Q9Y6E2 419 aaKnown RBP17.3■□□□□ 0.36
RBFOX1-212ENST00000550418 MAST3O60307 1309 aa17.3■□□□□ 0.36
RBFOX1-212ENST00000550418 ARHGAP31Q2M1Z3 1444 aa17.3■□□□□ 0.36
RBFOX1-212ENST00000550418 TEX11Q8IYF3 940 aa17.3■□□□□ 0.36
RBFOX1-212ENST00000550418 MAGOHBQ96A72 148 aaKnown RBP17.3■□□□□ 0.36
RBFOX1-212ENST00000550418 ANKRD2Q9GZV1 360 aa17.3■□□□□ 0.36
RBFOX1-212ENST00000550418 SAP30BPQ9UHR5 308 aaKnown RBP17.3■□□□□ 0.36
RBFOX1-212ENST00000550418 STK24Q9Y6E0 443 aa17.3■□□□□ 0.36
RBFOX1-212ENST00000550418 LOC102724159A0A0B4J2E5 919 aa17.29■□□□□ 0.36
RBFOX1-212ENST00000550418 FAM170AA1A519 330 aa17.29■□□□□ 0.36
RBFOX1-212ENST00000550418 FMNL1O95466 1100 aaPredicted RBP17.29■□□□□ 0.36
RBFOX1-212ENST00000550418 PLTPP55058 493 aa17.29■□□□□ 0.36
RBFOX1-212ENST00000550418 PWP2Q15269 919 aaKnown RBP17.29■□□□□ 0.36
RBFOX1-212ENST00000550418 KRT31Q15323 416 aa17.29■□□□□ 0.36
RBFOX1-212ENST00000550418 E4F1Q66K89 784 aaPredicted RBP17.29■□□□□ 0.36
RBFOX1-212ENST00000550418 FAM212AQ96EL1 285 aa17.29■□□□□ 0.36
RBFOX1-212ENST00000550418 SCOCQ9UIL1 159 aa17.29■□□□□ 0.36
RBFOX1-212ENST00000550418 A2ML1A8K2U0 1454 aa17.29■□□□□ 0.36
RBFOX1-212ENST00000550418 CHMP2AO43633 222 aa17.29■□□□□ 0.36
RBFOX1-212ENST00000550418 FTCDO95954 541 aa17.29■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 93.4 ms