RNA–Protein interactions for RNA: ENST00000550219.1

NUP188-211, Transcript of nucleoporin 188, humanhuman

TSL 1 (best)

Gene NUP188, Length 886 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP188-211ENST00000550219 STXBP5LQ9Y2K9 1186 aa15.78■□□□□ 0.12
NUP188-211ENST00000550219 C11orf97A0A1B0GVM6 126 aaPredicted RBP15.77■□□□□ 0.12
NUP188-211ENST00000550219 SOWAHBA6NEL2 793 aa15.77■□□□□ 0.12
NUP188-211ENST00000550219 DCDC2CA8MYV0 355 aa15.77■□□□□ 0.12
NUP188-211ENST00000550219 ASGR1P07306 291 aa15.77■□□□□ 0.12
NUP188-211ENST00000550219 HSPD1P10809 573 aaKnown RBP15.77■□□□□ 0.12
NUP188-211ENST00000550219 ALX1Q15699 326 aa15.77■□□□□ 0.12
NUP188-211ENST00000550219 TTBK2Q6IQ55 1244 aa15.77■□□□□ 0.12
NUP188-211ENST00000550219 DCAF4Q8WV16 495 aa15.77■□□□□ 0.12
NUP188-211ENST00000550219 GPCPD1Q9NPB8 672 aa15.77■□□□□ 0.12
NUP188-211ENST00000550219 DIAPH3Q9NSV4 1193 aa15.77■□□□□ 0.12
NUP188-211ENST00000550219 PLA2G6O60733 806 aa15.76■□□□□ 0.11
NUP188-211ENST00000550219 TOP1P11387 765 aaKnown RBP15.76■□□□□ 0.11
NUP188-211ENST00000550219 CST5P28325 142 aaPredicted RBP15.76■□□□□ 0.11
NUP188-211ENST00000550219 BEX3Q00994 111 aa15.76■□□□□ 0.11
NUP188-211ENST00000550219 TNFAIP2Q03169 654 aa15.76■□□□□ 0.11
NUP188-211ENST00000550219 FPGSQ05932 587 aa15.76■□□□□ 0.11
NUP188-211ENST00000550219 GNASQ5JWF2 1037 aa15.76■□□□□ 0.11
NUP188-211ENST00000550219 SYDE2Q5VT97 1194 aa15.76■□□□□ 0.11
NUP188-211ENST00000550219 CCSAPQ6IQ19 270 aaPredicted RBP15.76■□□□□ 0.11
NUP188-211ENST00000550219 EEPD1Q7L9B9 569 aa15.76■□□□□ 0.11
NUP188-211ENST00000550219 TBC1D10CQ8IV04 446 aa15.76■□□□□ 0.11
NUP188-211ENST00000550219 FBXO16Q8IX29 292 aaPredicted RBP15.76■□□□□ 0.11
NUP188-211ENST00000550219 PCSK9Q8NBP7 692 aaKnown RBP15.76■□□□□ 0.11
NUP188-211ENST00000550219 RNPC3Q96LT9 517 aaKnown RBP15.76■□□□□ 0.11
NUP188-211ENST00000550219 KATNBL1Q9H079 304 aa15.76■□□□□ 0.11
NUP188-211ENST00000550219 UPF3AQ9H1J1 476 aaKnown RBP15.76■□□□□ 0.11
NUP188-211ENST00000550219 ASTN1O14525 1302 aa15.75■□□□□ 0.11
NUP188-211ENST00000550219 ZMYM6O95789 1325 aa15.75■□□□□ 0.11
NUP188-211ENST00000550219 DNAH12Q6ZR08 3092 aa15.75■□□□□ 0.11
NUP188-211ENST00000550219 ASB14A6NK59 587 aa15.75■□□□□ 0.11
NUP188-211ENST00000550219 KIAA0355O15063 1070 aa15.75■□□□□ 0.11
NUP188-211ENST00000550219 ICAM1P05362 532 aa15.75■□□□□ 0.11
NUP188-211ENST00000550219 PTGS1P23219 599 aa15.75■□□□□ 0.11
NUP188-211ENST00000550219 EPHB4P54760 987 aa15.75■□□□□ 0.11
NUP188-211ENST00000550219 GJA9P57773 515 aa15.75■□□□□ 0.11
NUP188-211ENST00000550219 FAAP100Q0VG06 881 aa15.75■□□□□ 0.11
NUP188-211ENST00000550219 C8orf34Q49A92 452 aa15.75■□□□□ 0.11
NUP188-211ENST00000550219 TLK2Q86UE8 772 aa15.75■□□□□ 0.11
NUP188-211ENST00000550219 GUCD1Q96NT3 240 aa15.75■□□□□ 0.11
NUP188-211ENST00000550219 PURBQ96QR8 312 aaKnown RBP15.75■□□□□ 0.11
NUP188-211ENST00000550219 TMEM47Q9BQJ4 181 aa15.75■□□□□ 0.11
NUP188-211ENST00000550219 RANBP17Q9H2T7 1088 aaKnown RBP15.75■□□□□ 0.11
NUP188-211ENST00000550219 CYP39A1Q9NYL5 469 aa15.75■□□□□ 0.11
NUP188-211ENST00000550219 NEDD4P46934 1319 aa15.74■□□□□ 0.11
NUP188-211ENST00000550219 MROH7Q68CQ1 1323 aa15.74■□□□□ 0.11
NUP188-211ENST00000550219 RAD50Q92878 1312 aa15.74■□□□□ 0.11
NUP188-211ENST00000550219 A0A0U1RQG5 324 aaPredicted RBP15.74■□□□□ 0.11
NUP188-211ENST00000550219 SGSM2O43147 1006 aa15.74■□□□□ 0.11
NUP188-211ENST00000550219 FGRP09769 529 aa15.74■□□□□ 0.11
NUP188-211ENST00000550219 CASC1Q6TDU7 716 aa15.74■□□□□ 0.11
NUP188-211ENST00000550219 CWC27Q6UX04 472 aaKnown RBP15.74■□□□□ 0.11
NUP188-211ENST00000550219 MFSD6Q6ZSS7 791 aa15.74■□□□□ 0.11
NUP188-211ENST00000550219 ANKRD33Q7Z3H0 272 aa15.74■□□□□ 0.11
NUP188-211ENST00000550219 RUFY2Q8WXA3 655 aa15.74■□□□□ 0.11
NUP188-211ENST00000550219 ZKSCAN3Q9BRR0 538 aa15.74■□□□□ 0.11
NUP188-211ENST00000550219 ESYT1Q9BSJ8 1104 aa15.74■□□□□ 0.11
NUP188-211ENST00000550219 PPP1R12CQ9BZL4 782 aa15.74■□□□□ 0.11
NUP188-211ENST00000550219 IL25Q9H293 177 aa15.74■□□□□ 0.11
NUP188-211ENST00000550219 LCTP09848 1927 aa15.74■□□□□ 0.11
NUP188-211ENST00000550219 LAMA4Q16363 1823 aa15.73■□□□□ 0.11
NUP188-211ENST00000550219 ELP1O95163 1332 aa15.73■□□□□ 0.11
NUP188-211ENST00000550219 PTPDC1A2A3K4 754 aa15.73■□□□□ 0.11
NUP188-211ENST00000550219 NFIBO00712 420 aa15.73■□□□□ 0.11
NUP188-211ENST00000550219 PDHBP11177 359 aa15.73■□□□□ 0.11
NUP188-211ENST00000550219 NOVP48745 357 aa15.73■□□□□ 0.11
NUP188-211ENST00000550219 MFAP1P55081 439 aaKnown RBP15.73■□□□□ 0.11
NUP188-211ENST00000550219 AKNAD1Q5T1N1 836 aa15.73■□□□□ 0.11
NUP188-211ENST00000550219 FAM109BQ6ICB4 259 aaPredicted RBP15.73■□□□□ 0.11
NUP188-211ENST00000550219 CXCL17Q6UXB2 119 aa15.73■□□□□ 0.11
NUP188-211ENST00000550219 TOX2Q96NM4 488 aa15.73■□□□□ 0.11
NUP188-211ENST00000550219 AP5M1Q9H0R1 490 aa15.73■□□□□ 0.11
NUP188-211ENST00000550219 PDGFCQ9NRA1 345 aa15.73■□□□□ 0.11
NUP188-211ENST00000550219 TBX21Q9UL17 535 aa15.73■□□□□ 0.11
NUP188-211ENST00000550219 DLL1O00548 723 aa15.72■□□□□ 0.11
NUP188-211ENST00000550219 CTAGE5O15320 804 aa15.72■□□□□ 0.11
NUP188-211ENST00000550219 TLR3O15455 904 aaKnown RBP15.72■□□□□ 0.11
NUP188-211ENST00000550219 BAATQ14032 418 aaPredicted RBP15.72■□□□□ 0.11
NUP188-211ENST00000550219 SLC30A10Q6XR72 485 aa15.72■□□□□ 0.11
NUP188-211ENST00000550219 RNF41Q9H4P4 317 aaPredicted RBP15.72■□□□□ 0.11
NUP188-211ENST00000550219 ARVCFO00192 962 aa15.71■□□□□ 0.11
NUP188-211ENST00000550219 DYNC1LI2O43237 492 aaPredicted RBP15.71■□□□□ 0.11
NUP188-211ENST00000550219 TIMP1P01033 207 aa15.71■□□□□ 0.11
NUP188-211ENST00000550219 SMPD1P17405 629 aa15.71■□□□□ 0.11
NUP188-211ENST00000550219 CALML3P27482 149 aa15.71■□□□□ 0.11
NUP188-211ENST00000550219 SMAD3P84022 425 aaKnown RBP15.71■□□□□ 0.11
NUP188-211ENST00000550219 FSCN1Q16658 493 aaKnown RBP15.71■□□□□ 0.11
NUP188-211ENST00000550219 TMEM63BQ5T3F8 832 aa15.71■□□□□ 0.11
NUP188-211ENST00000550219 BTNL9Q6UXG8 535 aa15.71■□□□□ 0.11
NUP188-211ENST00000550219 FAM126BQ8IXS8 530 aa15.71■□□□□ 0.11
NUP188-211ENST00000550219 ESR2Q92731 530 aa15.71■□□□□ 0.11
NUP188-211ENST00000550219 TCP11L1Q9NUJ3 509 aa15.71■□□□□ 0.11
NUP188-211ENST00000550219 GNEQ9Y223 722 aaKnown RBP15.71■□□□□ 0.11
NUP188-211ENST00000550219 ZNF213O14771 459 aa15.7■□□□□ 0.1
NUP188-211ENST00000550219 GOLGA8HP0CJ92 632 aa15.7■□□□□ 0.1
NUP188-211ENST00000550219 ALDH5A1P51649 535 aaPredicted RBP15.7■□□□□ 0.1
NUP188-211ENST00000550219 ZNF543Q08ER8 600 aa15.7■□□□□ 0.1
NUP188-211ENST00000550219 USH1GQ495M9 461 aa15.7■□□□□ 0.1
NUP188-211ENST00000550219 KIAA1211Q6ZU35 1233 aa15.7■□□□□ 0.1
NUP188-211ENST00000550219 VTA1Q9NP79 307 aa15.7■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms