RNA–Protein interactions for RNA: ENST00000549417.5

LIN7A-202, Transcript of lin-7 homolog A, crumbs cell polarity complex component, humanhuman

TSL 1 (best)

Gene LIN7A, Length 905 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN7A-202ENST00000549417 TNFAIP2Q03169 654 aa8.28□□□□□ -1.08
LIN7A-202ENST00000549417 TCEAL5Q5H9L2 206 aa8.28□□□□□ -1.08
LIN7A-202ENST00000549417 TMEM63BQ5T3F8 832 aa8.28□□□□□ -1.08
LIN7A-202ENST00000549417 SNRNP48Q6IEG0 339 aaKnown RBP8.28□□□□□ -1.08
LIN7A-202ENST00000549417 TRIM67Q6ZTA4 783 aa8.28□□□□□ -1.08
LIN7A-202ENST00000549417 CCDC144CPQ8IYA2 1237 aa8.28□□□□□ -1.08
LIN7A-202ENST00000549417 MSL3Q8N5Y2 521 aaKnown RBP8.28□□□□□ -1.08
LIN7A-202ENST00000549417 FGD4Q96M96 766 aa8.28□□□□□ -1.08
LIN7A-202ENST00000549417 PHF12Q96QT6 1004 aa8.28□□□□□ -1.08
LIN7A-202ENST00000549417 CRBNQ96SW2 442 aa8.28□□□□□ -1.08
LIN7A-202ENST00000549417 C17orf80Q9BSJ5 609 aa8.28□□□□□ -1.08
LIN7A-202ENST00000549417 CLDND1Q9NY35 253 aa8.28□□□□□ -1.08
LIN7A-202ENST00000549417 ZNF214Q9UL59 606 aaPredicted RBP8.28□□□□□ -1.08
LIN7A-202ENST00000549417 FAM50BQ9Y247 325 aa8.28□□□□□ -1.08
LIN7A-202ENST00000549417 RIF1Q5UIP0 2472 aaKnown RBP8.27□□□□□ -1.09
LIN7A-202ENST00000549417 CACNA1HO95180 2353 aa8.27□□□□□ -1.09
LIN7A-202ENST00000549417 DNAJC25-GNG10A0A024R161 153 aa8.27□□□□□ -1.09
LIN7A-202ENST00000549417 PRR23AA6NEV1 266 aa8.27□□□□□ -1.09
LIN7A-202ENST00000549417 KDM4AO75164 1064 aa8.27□□□□□ -1.09
LIN7A-202ENST00000549417 CYP2E1P05181 493 aaPredicted RBP8.27□□□□□ -1.09
LIN7A-202ENST00000549417 POLR3DP05423 398 aaPredicted RBP8.27□□□□□ -1.09
LIN7A-202ENST00000549417 IQCF3P0C7M6 154 aa8.27□□□□□ -1.09
LIN7A-202ENST00000549417 WDR5P61964 334 aaKnown RBP8.27□□□□□ -1.09
LIN7A-202ENST00000549417 BMP8AQ7Z5Y6 402 aa8.27□□□□□ -1.09
LIN7A-202ENST00000549417 TTC6Q86TZ1 520 aa8.27□□□□□ -1.09
LIN7A-202ENST00000549417 SIAH1Q8IUQ4 282 aa8.27□□□□□ -1.09
LIN7A-202ENST00000549417 FBXL6Q8N531 539 aa8.27□□□□□ -1.09
LIN7A-202ENST00000549417 MRPL50Q8N5N7 158 aaKnown RBP8.27□□□□□ -1.09
LIN7A-202ENST00000549417 FBXO22Q8NEZ5 403 aa8.27□□□□□ -1.09
LIN7A-202ENST00000549417 REPS2Q8NFH8 660 aa8.27□□□□□ -1.09
LIN7A-202ENST00000549417 PPIL4Q8WUA2 492 aaKnown RBP eCLIP8.27□□□□□ -1.09
LIN7A-202ENST00000549417 CNTNAP3BQ96NU0 1288 aa8.27□□□□□ -1.09
LIN7A-202ENST00000549417 CNTNAP3Q9BZ76 1288 aa8.27□□□□□ -1.09
LIN7A-202ENST00000549417 KATNBL1Q9H079 304 aa8.27□□□□□ -1.09
LIN7A-202ENST00000549417 AP5M1Q9H0R1 490 aa8.27□□□□□ -1.09
LIN7A-202ENST00000549417 VCPKMTQ9H867 229 aa8.27□□□□□ -1.09
LIN7A-202ENST00000549417 COPRSQ9NQ92 184 aa8.27□□□□□ -1.09
LIN7A-202ENST00000549417 PIH1D3Q9NQM4 214 aaKnown RBP8.27□□□□□ -1.09
LIN7A-202ENST00000549417 ZBTB47Q9UFB7 747 aaPredicted RBP8.27□□□□□ -1.09
LIN7A-202ENST00000549417 ADAMTS5Q9UNA0 930 aa8.27□□□□□ -1.09
LIN7A-202ENST00000549417 TRIP12Q14669 1992 aaPredicted RBP8.27□□□□□ -1.09
LIN7A-202ENST00000549417 TANC1Q9C0D5 1861 aa8.27□□□□□ -1.09
LIN7A-202ENST00000549417 KMT2BQ9UMN6 2715 aaPredicted RBP8.27□□□□□ -1.09
LIN7A-202ENST00000549417 FAM186AA6NE01 2351 aa8.26□□□□□ -1.09
LIN7A-202ENST00000549417 WDR46O15213 610 aaKnown RBP8.26□□□□□ -1.09
LIN7A-202ENST00000549417 GALR2O43603 387 aaPredicted RBP8.26□□□□□ -1.09
LIN7A-202ENST00000549417 ZEB2O60315 1214 aa8.26□□□□□ -1.09
LIN7A-202ENST00000549417 SMPD1P17405 629 aa8.26□□□□□ -1.09
LIN7A-202ENST00000549417 RFC2P35250 354 aa8.26□□□□□ -1.09
LIN7A-202ENST00000549417 NKX3-2P78367 333 aa8.26□□□□□ -1.09
LIN7A-202ENST00000549417 CNTN2Q02246 1040 aa8.26□□□□□ -1.09
LIN7A-202ENST00000549417 ICA1Q05084 483 aa8.26□□□□□ -1.09
LIN7A-202ENST00000549417 TCTN1Q2MV58 587 aa8.26□□□□□ -1.09
LIN7A-202ENST00000549417 FAM47CQ5HY64 1035 aa8.26□□□□□ -1.09
LIN7A-202ENST00000549417 FAM83BQ5T0W9 1011 aa8.26□□□□□ -1.09
LIN7A-202ENST00000549417 EEPD1Q7L9B9 569 aa8.26□□□□□ -1.09
LIN7A-202ENST00000549417 ZNF467Q7Z7K2 595 aaPredicted RBP8.26□□□□□ -1.09
LIN7A-202ENST00000549417 CPXCR1Q8N123 301 aa8.26□□□□□ -1.09
LIN7A-202ENST00000549417 ANKRD35Q8N283 1001 aa8.26□□□□□ -1.09
LIN7A-202ENST00000549417 RETREG2Q8NC44 543 aa8.26□□□□□ -1.09
LIN7A-202ENST00000549417 BANK1Q8NDB2 785 aa8.26□□□□□ -1.09
LIN7A-202ENST00000549417 PABPC5Q96DU9 382 aaKnown RBP8.26□□□□□ -1.09
LIN7A-202ENST00000549417 MRPL38Q96DV4 380 aaKnown RBP8.26□□□□□ -1.09
LIN7A-202ENST00000549417 RAD9AQ99638 391 aa8.26□□□□□ -1.09
LIN7A-202ENST00000549417 FSD1Q9BTV5 496 aa8.26□□□□□ -1.09
LIN7A-202ENST00000549417 ARHGEF10LQ9HCE6 1279 aa8.26□□□□□ -1.09
LIN7A-202ENST00000549417 PDGFCQ9NRA1 345 aa8.26□□□□□ -1.09
LIN7A-202ENST00000549417 PPP1R9AQ9ULJ8 1098 aa8.26□□□□□ -1.09
LIN7A-202ENST00000549417 GNEQ9Y223 722 aaKnown RBP8.26□□□□□ -1.09
LIN7A-202ENST00000549417 MYO7AQ13402 2215 aa8.26□□□□□ -1.09
LIN7A-202ENST00000549417 EPG5Q9HCE0 2579 aa8.25□□□□□ -1.09
LIN7A-202ENST00000549417 E9PSI1 815 aa8.25□□□□□ -1.09
LIN7A-202ENST00000549417 STXBP3O00186 592 aa8.25□□□□□ -1.09
LIN7A-202ENST00000549417 BAIAP3O94812 1187 aa8.25□□□□□ -1.09
LIN7A-202ENST00000549417 CSPG5O95196 566 aa8.25□□□□□ -1.09
LIN7A-202ENST00000549417 GJB5O95377 273 aa8.25□□□□□ -1.09
LIN7A-202ENST00000549417 MYL3P08590 195 aa8.25□□□□□ -1.09
LIN7A-202ENST00000549417 UQCRFS1P1P0C7P4 283 aa8.25□□□□□ -1.09
LIN7A-202ENST00000549417 SUPT20HL2P0C7V6 817 aa8.25□□□□□ -1.09
LIN7A-202ENST00000549417 CYP2D6P10635 497 aa8.25□□□□□ -1.09
LIN7A-202ENST00000549417 AKR1B1P15121 316 aa8.25□□□□□ -1.09
LIN7A-202ENST00000549417 AVPR2P30518 371 aa8.25□□□□□ -1.09
LIN7A-202ENST00000549417 COPB2P35606 906 aa8.25□□□□□ -1.09
LIN7A-202ENST00000549417 LTBRP36941 435 aa8.25□□□□□ -1.09
LIN7A-202ENST00000549417 ZAP70P43403 619 aa8.25□□□□□ -1.09
LIN7A-202ENST00000549417 CHMP4BP1P59074 171 aa8.25□□□□□ -1.09
LIN7A-202ENST00000549417 ZXDAP98168 799 aa8.25□□□□□ -1.09
LIN7A-202ENST00000549417 GABPAQ06546 454 aa8.25□□□□□ -1.09
LIN7A-202ENST00000549417 DLX2Q07687 328 aaPredicted RBP8.25□□□□□ -1.09
LIN7A-202ENST00000549417 SMAD2Q15796 467 aaKnown RBP8.25□□□□□ -1.09
LIN7A-202ENST00000549417 PKN1Q16512 942 aa8.25□□□□□ -1.09
LIN7A-202ENST00000549417 TTC39AQ5SRH9 613 aa8.25□□□□□ -1.09
LIN7A-202ENST00000549417 TMEM179Q6ZVK1 233 aa8.25□□□□□ -1.09
LIN7A-202ENST00000549417 RPAINQ86UA6 219 aa8.25□□□□□ -1.09
LIN7A-202ENST00000549417 WDR63Q8IWG1 891 aa8.25□□□□□ -1.09
LIN7A-202ENST00000549417 ADSSL1Q8N142 457 aa8.25□□□□□ -1.09
LIN7A-202ENST00000549417 NUP88Q99567 741 aaPredicted RBP8.25□□□□□ -1.09
LIN7A-202ENST00000549417 POP1Q99575 1024 aaKnown RBP8.25□□□□□ -1.09
LIN7A-202ENST00000549417 PRKRIP1Q9H875 184 aaPredicted RBP8.25□□□□□ -1.09
LIN7A-202ENST00000549417 HOMER2Q9NSB8 354 aa8.25□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms