RNA–Protein interactions for RNA: ENST00000546735.5

TROAP-203, Transcript of trophinin associated protein, humanhuman

TSL 1 (best)

Gene TROAP, Length 1,213 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TROAP-203ENST00000546735 EEPD1Q7L9B9 569 aa16.87■□□□□ 0.29
TROAP-203ENST00000546735 NUP133Q8WUM0 1156 aa16.87■□□□□ 0.29
TROAP-203ENST00000546735 ZKSCAN3Q9BRR0 538 aa16.87■□□□□ 0.29
TROAP-203ENST00000546735 OSBPL3Q9H4L5 887 aa16.87■□□□□ 0.29
TROAP-203ENST00000546735 TCP11L1Q9NUJ3 509 aa16.87■□□□□ 0.29
TROAP-203ENST00000546735 TMEM39AQ9NV64 488 aa16.87■□□□□ 0.29
TROAP-203ENST00000546735 CYP39A1Q9NYL5 469 aa16.87■□□□□ 0.29
TROAP-203ENST00000546735 NEDD4P46934 1319 aa16.87■□□□□ 0.29
TROAP-203ENST00000546735 ASB14A6NK59 587 aa16.86■□□□□ 0.29
TROAP-203ENST00000546735 KIAA0355O15063 1070 aa16.86■□□□□ 0.29
TROAP-203ENST00000546735 CTAGE5O15320 804 aa16.86■□□□□ 0.29
TROAP-203ENST00000546735 ICAM1P05362 532 aa16.86■□□□□ 0.29
TROAP-203ENST00000546735 PDHBP11177 359 aa16.86■□□□□ 0.29
TROAP-203ENST00000546735 RAG1P15918 1043 aa16.86■□□□□ 0.29
TROAP-203ENST00000546735 CST5P28325 142 aaPredicted RBP16.86■□□□□ 0.29
TROAP-203ENST00000546735 TMEM63BQ5T3F8 832 aa16.86■□□□□ 0.29
TROAP-203ENST00000546735 BTNL9Q6UXG8 535 aa16.86■□□□□ 0.29
TROAP-203ENST00000546735 NOL8Q76FK4 1167 aaKnown RBP16.86■□□□□ 0.29
TROAP-203ENST00000546735 TICAM2Q86XR7 235 aa16.86■□□□□ 0.29
TROAP-203ENST00000546735 SLC17A8Q8NDX2 589 aa16.86■□□□□ 0.29
TROAP-203ENST00000546735 VTI1AQ96AJ9 217 aa16.86■□□□□ 0.29
TROAP-203ENST00000546735 GLT1D1Q96MS3 346 aa16.86■□□□□ 0.29
TROAP-203ENST00000546735 UPF3AQ9H1J1 476 aaKnown RBP16.86■□□□□ 0.29
TROAP-203ENST00000546735 SPC25Q9HBM1 224 aa16.86■□□□□ 0.29
TROAP-203ENST00000546735 PDGFCQ9NRA1 345 aa16.86■□□□□ 0.29
TROAP-203ENST00000546735 DCDC2CA8MYV0 355 aa16.85■□□□□ 0.29
TROAP-203ENST00000546735 NFIBO00712 420 aa16.85■□□□□ 0.29
TROAP-203ENST00000546735 TNFAIP2Q03169 654 aa16.85■□□□□ 0.29
TROAP-203ENST00000546735 GNASQ5JWF2 1037 aa16.85■□□□□ 0.29
TROAP-203ENST00000546735 ANKRD33Q7Z3H0 272 aa16.85■□□□□ 0.29
TROAP-203ENST00000546735 FBXO16Q8IX29 292 aaPredicted RBP16.85■□□□□ 0.29
TROAP-203ENST00000546735 PCSK9Q8NBP7 692 aaKnown RBP16.85■□□□□ 0.29
TROAP-203ENST00000546735 MCM3APO60318 1980 aa16.85■□□□□ 0.29
TROAP-203ENST00000546735 SMPD1P17405 629 aa16.84■□□□□ 0.29
TROAP-203ENST00000546735 MFAP1P55081 439 aaKnown RBP16.84■□□□□ 0.29
TROAP-203ENST00000546735 BAATQ14032 418 aaPredicted RBP16.84■□□□□ 0.29
TROAP-203ENST00000546735 TOX2Q96NM4 488 aa16.84■□□□□ 0.29
TROAP-203ENST00000546735 GUCD1Q96NT3 240 aa16.84■□□□□ 0.29
TROAP-203ENST00000546735 CPVLQ9H3G5 476 aa16.84■□□□□ 0.29
TROAP-203ENST00000546735 DIAPH3Q9NSV4 1193 aa16.84■□□□□ 0.29
TROAP-203ENST00000546735 STXBP5LQ9Y2K9 1186 aa16.84■□□□□ 0.29
TROAP-203ENST00000546735 ELP1O95163 1332 aa16.84■□□□□ 0.29
TROAP-203ENST00000546735 ZNF213O14771 459 aa16.83■□□□□ 0.28
TROAP-203ENST00000546735 DYNC1LI2O43237 492 aaPredicted RBP16.83■□□□□ 0.28
TROAP-203ENST00000546735 GOLGA8HP0CJ92 632 aa16.83■□□□□ 0.28
TROAP-203ENST00000546735 CDK7P50613 346 aa16.83■□□□□ 0.28
TROAP-203ENST00000546735 ZNF543Q08ER8 600 aa16.83■□□□□ 0.28
TROAP-203ENST00000546735 TAPT1Q6NXT6 567 aa16.83■□□□□ 0.28
TROAP-203ENST00000546735 CXCL17Q6UXB2 119 aa16.83■□□□□ 0.28
TROAP-203ENST00000546735 ESR2Q92731 530 aa16.83■□□□□ 0.28
TROAP-203ENST00000546735 RNF41Q9H4P4 317 aaPredicted RBP16.83■□□□□ 0.28
TROAP-203ENST00000546735 GNEQ9Y223 722 aaKnown RBP16.83■□□□□ 0.28
TROAP-203ENST00000546735 A0A0U1RQG5 324 aaPredicted RBP16.82■□□□□ 0.28
TROAP-203ENST00000546735 PTPDC1A2A3K4 754 aa16.82■□□□□ 0.28
TROAP-203ENST00000546735 ARVCFO00192 962 aa16.82■□□□□ 0.28
TROAP-203ENST00000546735 SNHG28P0DPA3 235 aa16.82■□□□□ 0.28
TROAP-203ENST00000546735 CALML3P27482 149 aa16.82■□□□□ 0.28
TROAP-203ENST00000546735 FPGSQ05932 587 aa16.82■□□□□ 0.28
TROAP-203ENST00000546735 SLC30A10Q6XR72 485 aa16.82■□□□□ 0.28
TROAP-203ENST00000546735 TLK2Q86UE8 772 aa16.82■□□□□ 0.28
TROAP-203ENST00000546735 TTC14Q96N46 770 aa16.82■□□□□ 0.28
TROAP-203ENST00000546735 UBA5Q9GZZ9 404 aa16.82■□□□□ 0.28
TROAP-203ENST00000546735 TBX21Q9UL17 535 aa16.82■□□□□ 0.28
TROAP-203ENST00000546735 SUPT16HQ9Y5B9 1047 aaKnown RBP16.82■□□□□ 0.28
TROAP-203ENST00000546735 KDM4AO75164 1064 aa16.81■□□□□ 0.28
TROAP-203ENST00000546735 PCP11498 1178 aaKnown RBP16.81■□□□□ 0.28
TROAP-203ENST00000546735 ALDH5A1P51649 535 aaPredicted RBP16.81■□□□□ 0.28
TROAP-203ENST00000546735 NKX3-2P78367 333 aa16.81■□□□□ 0.28
TROAP-203ENST00000546735 ZNF697Q5TEC3 545 aa16.81■□□□□ 0.28
TROAP-203ENST00000546735 FAM109BQ6ICB4 259 aaPredicted RBP16.81■□□□□ 0.28
TROAP-203ENST00000546735 KIAA1211Q6ZU35 1233 aa16.81■□□□□ 0.28
TROAP-203ENST00000546735 CLEC4DQ8WXI8 215 aa16.81■□□□□ 0.28
TROAP-203ENST00000546735 RNPC3Q96LT9 517 aaKnown RBP16.81■□□□□ 0.28
TROAP-203ENST00000546735 PPP1R12CQ9BZL4 782 aa16.81■□□□□ 0.28
TROAP-203ENST00000546735 AP5M1Q9H0R1 490 aa16.81■□□□□ 0.28
TROAP-203ENST00000546735 IL25Q9H293 177 aa16.81■□□□□ 0.28
TROAP-203ENST00000546735 LRRC37A2A6NM11 1700 aa16.8■□□□□ 0.28
TROAP-203ENST00000546735 B4E1Z4 1266 aa16.8■□□□□ 0.28
TROAP-203ENST00000546735 TIMP1P01033 207 aa16.8■□□□□ 0.28
TROAP-203ENST00000546735 PDE4AP27815 886 aa16.8■□□□□ 0.28
TROAP-203ENST00000546735 FSCN1Q16658 493 aaKnown RBP16.8■□□□□ 0.28
TROAP-203ENST00000546735 FAM126BQ8IXS8 530 aa16.8■□□□□ 0.28
TROAP-203ENST00000546735 MORC4Q8TE76 937 aa16.8■□□□□ 0.28
TROAP-203ENST00000546735 VTA1Q9NP79 307 aa16.8■□□□□ 0.28
TROAP-203ENST00000546735 MROH7Q68CQ1 1323 aa16.79■□□□□ 0.28
TROAP-203ENST00000546735 LCTP09848 1927 aa16.79■□□□□ 0.28
TROAP-203ENST00000546735 PSMC6P62333 389 aa16.79■□□□□ 0.28
TROAP-203ENST00000546735 IRX6P78412 446 aaPredicted RBP16.79■□□□□ 0.28
TROAP-203ENST00000546735 USH1GQ495M9 461 aa16.79■□□□□ 0.28
TROAP-203ENST00000546735 IQSEC1Q6DN90 963 aa16.79■□□□□ 0.28
TROAP-203ENST00000546735 RNF207Q6ZRF8 634 aa16.79■□□□□ 0.28
TROAP-203ENST00000546735 DGKHQ86XP1 1220 aa16.79■□□□□ 0.28
TROAP-203ENST00000546735 DSCC1Q9BVC3 393 aa16.79■□□□□ 0.28
TROAP-203ENST00000546735 ADD3Q9UEY8 706 aaKnown RBP16.79■□□□□ 0.28
TROAP-203ENST00000546735 GRIN2DO15399 1336 aa16.78■□□□□ 0.28
TROAP-203ENST00000546735 HIP1O00291 1037 aa16.78■□□□□ 0.28
TROAP-203ENST00000546735 RPS6P62753 249 aaKnown RBP16.78■□□□□ 0.28
TROAP-203ENST00000546735 SMAD3P84022 425 aaKnown RBP16.78■□□□□ 0.28
TROAP-203ENST00000546735 MFSD5Q6N075 450 aa16.78■□□□□ 0.28
TROAP-203ENST00000546735 IQCA1Q86XH1 822 aa16.78■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 96.2 ms