RNA–Protein interactions for RNA: ENST00000542337.5

DDB1-220, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 3

Gene DDB1, Length 558 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-220ENST00000542337 B4E1Z4 1266 aa23.73■■□□□ 1.39
DDB1-220ENST00000542337 PDE4AP27815 886 aa23.73■■□□□ 1.39
DDB1-220ENST00000542337 TLE2Q04725 743 aa23.73■■□□□ 1.39
DDB1-220ENST00000542337 KCNA10Q16322 511 aa23.73■■□□□ 1.39
DDB1-220ENST00000542337 KLHDC9Q8NEP7 349 aa23.73■■□□□ 1.39
DDB1-220ENST00000542337 VTI1AQ96AJ9 217 aa23.73■■□□□ 1.39
DDB1-220ENST00000542337 ADD3Q9UEY8 706 aaKnown RBP23.73■■□□□ 1.39
DDB1-220ENST00000542337 DNAH12Q6ZR08 3092 aa23.72■■□□□ 1.39
DDB1-220ENST00000542337 SNHG28P0DPA3 235 aa23.72■■□□□ 1.39
DDB1-220ENST00000542337 TNFAIP2Q03169 654 aa23.72■■□□□ 1.39
DDB1-220ENST00000542337 GNASQ5JWF2 1037 aa23.72■■□□□ 1.39
DDB1-220ENST00000542337 PNMA1Q8ND90 353 aa23.72■■□□□ 1.39
DDB1-220ENST00000542337 GLT1D1Q96MS3 346 aa23.72■■□□□ 1.39
DDB1-220ENST00000542337 ZSCAN10Q96SZ4 725 aaPredicted RBP23.72■■□□□ 1.39
DDB1-220ENST00000542337 UBAC1Q9BSL1 405 aa23.72■■□□□ 1.39
DDB1-220ENST00000542337 SMCHD1A6NHR9 2005 aa23.71■■□□□ 1.39
DDB1-220ENST00000542337 RAD50Q92878 1312 aa23.71■■□□□ 1.39
DDB1-220ENST00000542337 PTPDC1A2A3K4 754 aa23.71■■□□□ 1.39
DDB1-220ENST00000542337 SOX1O00570 391 aaPredicted RBP23.71■■□□□ 1.39
DDB1-220ENST00000542337 CST5P28325 142 aaPredicted RBP23.71■■□□□ 1.39
DDB1-220ENST00000542337 GJA9P57773 515 aa23.71■■□□□ 1.39
DDB1-220ENST00000542337 BAATQ14032 418 aaPredicted RBP23.71■■□□□ 1.39
DDB1-220ENST00000542337 GPR153Q6NV75 609 aa23.71■■□□□ 1.39
DDB1-220ENST00000542337 ANKS1AQ92625 1134 aa23.71■■□□□ 1.39
DDB1-220ENST00000542337 LRCH3Q96II8 777 aa23.71■■□□□ 1.39
DDB1-220ENST00000542337 MPHOSPH6Q99547 160 aaKnown RBP23.71■■□□□ 1.39
DDB1-220ENST00000542337 ZSWIM5Q9P217 1185 aa23.71■■□□□ 1.39
DDB1-220ENST00000542337 DCDC2CA8MYV0 355 aa23.7■■□□□ 1.38
DDB1-220ENST00000542337 PQBP1O60828 265 aaKnown RBP23.7■■□□□ 1.38
DDB1-220ENST00000542337 CLTBP09497 229 aa23.7■■□□□ 1.38
DDB1-220ENST00000542337 GSPT1P15170 499 aaKnown RBP23.7■■□□□ 1.38
DDB1-220ENST00000542337 TRDNQ13061 729 aa23.7■■□□□ 1.38
DDB1-220ENST00000542337 AP5M1Q9H0R1 490 aa23.7■■□□□ 1.38
DDB1-220ENST00000542337 UPF3AQ9H1J1 476 aaKnown RBP23.7■■□□□ 1.38
DDB1-220ENST00000542337 PDLIM7Q9NR12 457 aa23.7■■□□□ 1.38
DDB1-220ENST00000542337 ELP1O95163 1332 aa23.69■■□□□ 1.38
DDB1-220ENST00000542337 GOLGA8HP0CJ92 632 aa23.69■■□□□ 1.38
DDB1-220ENST00000542337 IQSEC1Q6DN90 963 aa23.69■■□□□ 1.38
DDB1-220ENST00000542337 TOX2Q96NM4 488 aa23.69■■□□□ 1.38
DDB1-220ENST00000542337 KATNBL1Q9H079 304 aa23.69■■□□□ 1.38
DDB1-220ENST00000542337 MROH7Q68CQ1 1323 aa23.68■■□□□ 1.38
DDB1-220ENST00000542337 WDR19Q8NEZ3 1342 aa23.68■■□□□ 1.38
DDB1-220ENST00000542337 LOC102724159A0A0B4J2E5 919 aa23.68■■□□□ 1.38
DDB1-220ENST00000542337 ZEB2O60315 1214 aa23.68■■□□□ 1.38
DDB1-220ENST00000542337 ASGR1P07306 291 aa23.68■■□□□ 1.38
DDB1-220ENST00000542337 PWP2Q15269 919 aaKnown RBP23.68■■□□□ 1.38
DDB1-220ENST00000542337 ASPRV1Q53RT3 343 aa23.68■■□□□ 1.38
DDB1-220ENST00000542337 CCSAPQ6IQ19 270 aaPredicted RBP23.68■■□□□ 1.38
DDB1-220ENST00000542337 RNF207Q6ZRF8 634 aa23.68■■□□□ 1.38
DDB1-220ENST00000542337 BADQ92934 168 aa23.68■■□□□ 1.38
DDB1-220ENST00000542337 VTA1Q9NP79 307 aa23.68■■□□□ 1.38
DDB1-220ENST00000542337 TMEM39AQ9NV64 488 aa23.68■■□□□ 1.38
DDB1-220ENST00000542337 U3KPZ7 1027 aaPredicted RBP23.68■■□□□ 1.38
DDB1-220ENST00000542337 TNKSO95271 1327 aa23.67■■□□□ 1.38
DDB1-220ENST00000542337 B4DLN1 442 aa23.67■■□□□ 1.38
DDB1-220ENST00000542337 NFIBO00712 420 aa23.67■■□□□ 1.38
DDB1-220ENST00000542337 CALML3P27482 149 aa23.67■■□□□ 1.38
DDB1-220ENST00000542337 MRPL12P52815 198 aaKnown RBP23.67■■□□□ 1.38
DDB1-220ENST00000542337 EEPD1Q7L9B9 569 aa23.67■■□□□ 1.38
DDB1-220ENST00000542337 ANKRD33Q7Z3H0 272 aa23.67■■□□□ 1.38
DDB1-220ENST00000542337 ENAHQ8N8S7 591 aaPredicted RBP23.67■■□□□ 1.38
DDB1-220ENST00000542337 UBA5Q9GZZ9 404 aa23.67■■□□□ 1.38
DDB1-220ENST00000542337 TRIM43BA6NCK2 446 aa23.66■■□□□ 1.38
DDB1-220ENST00000542337 MYADML2A6NDP7 307 aa23.66■■□□□ 1.38
DDB1-220ENST00000542337 ADCY6O43306 1168 aa23.66■■□□□ 1.38
DDB1-220ENST00000542337 DHX16O60231 1041 aaKnown RBP23.66■■□□□ 1.38
DDB1-220ENST00000542337 PARP1P09874 1014 aaKnown RBP23.66■■□□□ 1.38
DDB1-220ENST00000542337 RAG1P15918 1043 aa23.66■■□□□ 1.38
DDB1-220ENST00000542337 CHMLP26374 656 aa23.66■■□□□ 1.38
DDB1-220ENST00000542337 IFIT1BQ5T764 474 aaKnown RBP23.66■■□□□ 1.38
DDB1-220ENST00000542337 KIAA1211Q6ZU35 1233 aa23.66■■□□□ 1.38
DDB1-220ENST00000542337 SH3RF1Q7Z6J0 888 aa23.66■■□□□ 1.38
DDB1-220ENST00000542337 TRIM43Q96BQ3 446 aaPredicted RBP23.66■■□□□ 1.38
DDB1-220ENST00000542337 Q9Y3F1 56 aa23.66■■□□□ 1.38
DDB1-220ENST00000542337 DYNC1LI2O43237 492 aaPredicted RBP23.65■■□□□ 1.38
DDB1-220ENST00000542337 ALDH5A1P51649 535 aaPredicted RBP23.65■■□□□ 1.38
DDB1-220ENST00000542337 NKX3-2P78367 333 aa23.65■■□□□ 1.38
DDB1-220ENST00000542337 USH1GQ495M9 461 aa23.65■■□□□ 1.38
DDB1-220ENST00000542337 TLK2Q86UE8 772 aa23.65■■□□□ 1.38
DDB1-220ENST00000542337 FBXO16Q8IX29 292 aaPredicted RBP23.65■■□□□ 1.38
DDB1-220ENST00000542337 MORC4Q8TE76 937 aa23.65■■□□□ 1.38
DDB1-220ENST00000542337 CLEC4DQ8WXI8 215 aa23.65■■□□□ 1.38
DDB1-220ENST00000542337 PURBQ96QR8 312 aaKnown RBP23.65■■□□□ 1.38
DDB1-220ENST00000542337 ASTN1O14525 1302 aa23.64■■□□□ 1.38
DDB1-220ENST00000542337 A0A0U1RQG5 324 aaPredicted RBP23.64■■□□□ 1.37
DDB1-220ENST00000542337 C11orf97A0A1B0GVM6 126 aaPredicted RBP23.64■■□□□ 1.37
DDB1-220ENST00000542337 KIAA0355O15063 1070 aa23.64■■□□□ 1.37
DDB1-220ENST00000542337 CABYRO75952 493 aa23.64■■□□□ 1.37
DDB1-220ENST00000542337 SMPD1P17405 629 aa23.64■■□□□ 1.37
DDB1-220ENST00000542337 FSCN1Q16658 493 aaKnown RBP23.64■■□□□ 1.37
DDB1-220ENST00000542337 TAPT1Q6NXT6 567 aa23.64■■□□□ 1.37
DDB1-220ENST00000542337 PDGFCQ9NRA1 345 aa23.64■■□□□ 1.37
DDB1-220ENST00000542337 GNEQ9Y223 722 aaKnown RBP23.64■■□□□ 1.37
DDB1-220ENST00000542337 ARVCFO00192 962 aa23.63■■□□□ 1.37
DDB1-220ENST00000542337 RPS6P62753 249 aaKnown RBP23.63■■□□□ 1.37
DDB1-220ENST00000542337 BEX3Q00994 111 aa23.63■■□□□ 1.37
DDB1-220ENST00000542337 PDE4DQ08499 809 aa23.63■■□□□ 1.37
DDB1-220ENST00000542337 CDC37Q16543 378 aaPredicted RBP23.63■■□□□ 1.37
DDB1-220ENST00000542337 ADGRF4Q8IZF3 695 aa23.63■■□□□ 1.37
DDB1-220ENST00000542337 DEFB123Q8N688 67 aa23.63■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms