RNA–Protein interactions for RNA: ENST00000542286.5

DDX55-209, Transcript of DEAD-box helicase 55, humanhuman

TSL 2

Gene DDX55, Length 2,767 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-209ENST00000542286 LY75O60449 1722 aa16.6■□□□□ 0.25
DDX55-209ENST00000542286 MPHOSPH10O00566 681 aaKnown RBP16.6■□□□□ 0.25
DDX55-209ENST00000542286 RGL2O15211 777 aa16.6■□□□□ 0.25
DDX55-209ENST00000542286 SEC31AO94979 1220 aaKnown RBP16.6■□□□□ 0.25
DDX55-209ENST00000542286 TCP10Q12799 353 aa16.6■□□□□ 0.25
DDX55-209ENST00000542286 TCP11X2Q5H9J9 407 aa16.6■□□□□ 0.25
DDX55-209ENST00000542286 CERKQ8TCT0 537 aa16.6■□□□□ 0.25
DDX55-209ENST00000542286 NUP88Q99567 741 aaPredicted RBP16.6■□□□□ 0.25
DDX55-209ENST00000542286 CHP1Q99653 195 aa16.6■□□□□ 0.25
DDX55-209ENST00000542286 PPEF1O14829 653 aaPredicted RBP16.6■□□□□ 0.25
DDX55-209ENST00000542286 MYO1BO43795 1136 aa16.6■□□□□ 0.25
DDX55-209ENST00000542286 SLC37A4O43826 429 aa16.6■□□□□ 0.25
DDX55-209ENST00000542286 PDHBP11177 359 aa16.6■□□□□ 0.25
DDX55-209ENST00000542286 CASQ1P31415 396 aa16.6■□□□□ 0.25
DDX55-209ENST00000542286 GNAQP50148 359 aa16.6■□□□□ 0.25
DDX55-209ENST00000542286 UBXN1Q04323 297 aa16.6■□□□□ 0.25
DDX55-209ENST00000542286 STK4Q13043 487 aa16.6■□□□□ 0.25
DDX55-209ENST00000542286 ARL6IP4Q66PJ3 421 aaKnown RBP16.6■□□□□ 0.25
DDX55-209ENST00000542286 KCTD1Q719H9 257 aa16.6■□□□□ 0.25
DDX55-209ENST00000542286 CABP7Q86V35 215 aa16.6■□□□□ 0.25
DDX55-209ENST00000542286 CCDC148Q8NFR7 591 aa16.6■□□□□ 0.25
DDX55-209ENST00000542286 CCDC12Q8WUD4 166 aaPredicted RBP16.6■□□□□ 0.25
DDX55-209ENST00000542286 RRP36Q96EU6 259 aaKnown RBP16.6■□□□□ 0.25
DDX55-209ENST00000542286 SRRTQ9BXP5 876 aaKnown RBP16.6■□□□□ 0.25
DDX55-209ENST00000542286 ZMYND12Q9H0C1 365 aa16.6■□□□□ 0.25
DDX55-209ENST00000542286 DBNDD1Q9H9R9 158 aa16.6■□□□□ 0.25
DDX55-209ENST00000542286 SH3GLB2Q9NR46 395 aa16.6■□□□□ 0.25
DDX55-209ENST00000542286 TCP11L1Q9NUJ3 509 aa16.6■□□□□ 0.25
DDX55-209ENST00000542286 ARGLU1Q9NWB6 273 aaPredicted RBP16.6■□□□□ 0.25
DDX55-209ENST00000542286 TRIM10Q9UDY6 481 aa16.6■□□□□ 0.25
DDX55-209ENST00000542286 POTEMA6NI47 508 aa16.59■□□□□ 0.25
DDX55-209ENST00000542286 MNS1Q8NEH6 495 aa16.59■□□□□ 0.25
DDX55-209ENST00000542286 UBXN4Q92575 508 aa16.59■□□□□ 0.25
DDX55-209ENST00000542286 NUDT12Q9BQG2 462 aa16.59■□□□□ 0.25
DDX55-209ENST00000542286 SEC63Q9UGP8 760 aaKnown RBP16.59■□□□□ 0.25
DDX55-209ENST00000542286 RWDD2AQ9UIY3 292 aa16.59■□□□□ 0.25
DDX55-209ENST00000542286 ADGRG1Q9Y653 693 aa16.59■□□□□ 0.25
DDX55-209ENST00000542286 PHLPP2Q6ZVD8 1323 aa16.59■□□□□ 0.25
DDX55-209ENST00000542286 MYH1P12882 1939 aa16.59■□□□□ 0.25
DDX55-209ENST00000542286 ADAMTSL1Q8N6G6 1762 aa16.59■□□□□ 0.25
DDX55-209ENST00000542286 EDIL3O43854 480 aa16.59■□□□□ 0.25
DDX55-209ENST00000542286 SNAP25P60880 206 aa16.59■□□□□ 0.25
DDX55-209ENST00000542286 FILIP1LQ4L180 1135 aa16.59■□□□□ 0.25
DDX55-209ENST00000542286 TXLNBQ8N3L3 684 aa16.59■□□□□ 0.25
DDX55-209ENST00000542286 KIFC2Q96AC6 838 aa16.59■□□□□ 0.25
DDX55-209ENST00000542286 SLF1Q9BQI6 1058 aa16.59■□□□□ 0.25
DDX55-209ENST00000542286 QTRT2Q9H974 415 aaKnown RBP16.59■□□□□ 0.25
DDX55-209ENST00000542286 OR52Z1P0C646 297 aa16.58■□□□□ 0.25
DDX55-209ENST00000542286 NONOQ15233 471 aaKnown RBP eCLIP16.58■□□□□ 0.25
DDX55-209ENST00000542286 DYMQ7RTS9 669 aa16.58■□□□□ 0.25
DDX55-209ENST00000542286 TRIM47Q96LD4 638 aa16.58■□□□□ 0.25
DDX55-209ENST00000542286 MMTAG2Q9BU76 263 aaKnown RBP16.58■□□□□ 0.25
DDX55-209ENST00000542286 USP40Q9NVE5 1235 aa16.58■□□□□ 0.25
DDX55-209ENST00000542286 PPP1R11O60927 126 aaPredicted RBP16.58■□□□□ 0.24
DDX55-209ENST00000542286 TNNT3P45378 269 aaPredicted RBP16.58■□□□□ 0.24
DDX55-209ENST00000542286 SOGA3Q5TF21 947 aa16.58■□□□□ 0.24
DDX55-209ENST00000542286 ADSSL1Q8N142 457 aa16.58■□□□□ 0.24
DDX55-209ENST00000542286 GLIS3Q8NEA6 775 aa16.58■□□□□ 0.24
DDX55-209ENST00000542286 ZCCHC17Q9NP64 241 aaKnown RBP16.58■□□□□ 0.24
DDX55-209ENST00000542286 TNNI2P48788 182 aa16.57■□□□□ 0.24
DDX55-209ENST00000542286 ASIC1P78348 528 aa16.57■□□□□ 0.24
DDX55-209ENST00000542286 MTMR4Q9NYA4 1195 aa16.57■□□□□ 0.24
DDX55-209ENST00000542286 PUF60Q9UHX1 559 aaKnown RBP16.57■□□□□ 0.24
DDX55-209ENST00000542286 UBR3Q6ZT12 1888 aa16.57■□□□□ 0.24
DDX55-209ENST00000542286 B4DLN1 442 aa16.57■□□□□ 0.24
DDX55-209ENST00000542286 BBOX1O75936 387 aa16.57■□□□□ 0.24
DDX55-209ENST00000542286 KRT9P35527 623 aa16.57■□□□□ 0.24
DDX55-209ENST00000542286 NEK8Q86SG6 692 aa16.57■□□□□ 0.24
DDX55-209ENST00000542286 CERS3Q8IU89 383 aa16.57■□□□□ 0.24
DDX55-209ENST00000542286 REXO1Q8N1G1 1221 aaKnown RBP16.57■□□□□ 0.24
DDX55-209ENST00000542286 SPZ1Q9BXG8 430 aa16.57■□□□□ 0.24
DDX55-209ENST00000542286 SLC39A2Q9NP94 309 aa16.57■□□□□ 0.24
DDX55-209ENST00000542286 LIMA1Q9UHB6 759 aaKnown RBP16.57■□□□□ 0.24
DDX55-209ENST00000542286 CCDC175P0C221 793 aa16.56■□□□□ 0.24
DDX55-209ENST00000542286 PDE4DQ08499 809 aa16.56■□□□□ 0.24
DDX55-209ENST00000542286 MUM1L1Q5H9M0 696 aa16.56■□□□□ 0.24
DDX55-209ENST00000542286 KIAA0825Q8IV33 1275 aa16.56■□□□□ 0.24
DDX55-209ENST00000542286 C6orf50Q9HD87 102 aa16.56■□□□□ 0.24
DDX55-209ENST00000542286 ABHD10Q9NUJ1 306 aa16.56■□□□□ 0.24
DDX55-209ENST00000542286 GAKO14976 1311 aa16.56■□□□□ 0.24
DDX55-209ENST00000542286 TADA3O75528 432 aa16.56■□□□□ 0.24
DDX55-209ENST00000542286 ZNF569Q5MCW4 686 aa16.56■□□□□ 0.24
DDX55-209ENST00000542286 C15orf52Q6ZUT6 534 aaKnown RBP16.56■□□□□ 0.24
DDX55-209ENST00000542286 PANX2Q96RD6 677 aa16.56■□□□□ 0.24
DDX55-209ENST00000542286 ZC3H12CQ9C0D7 883 aaKnown RBP16.56■□□□□ 0.24
DDX55-209ENST00000542286 KBTBD4Q9NVX7 518 aa16.56■□□□□ 0.24
DDX55-209ENST00000542286 TTC26A0AVF1 554 aa16.55■□□□□ 0.24
DDX55-209ENST00000542286 CCP110O43303 1012 aa16.55■□□□□ 0.24
DDX55-209ENST00000542286 MCM6Q14566 821 aa16.55■□□□□ 0.24
DDX55-209ENST00000542286 KCNK18Q7Z418 384 aa16.55■□□□□ 0.24
DDX55-209ENST00000542286 DAGLBQ8NCG7 672 aa16.55■□□□□ 0.24
DDX55-209ENST00000542286 USP17L10C9JJH3 530 aa16.55■□□□□ 0.24
DDX55-209ENST00000542286 CCDC96Q2M329 555 aa16.55■□□□□ 0.24
DDX55-209ENST00000542286 ANKRD40Q6AI12 368 aa16.55■□□□□ 0.24
DDX55-209ENST00000542286 CTAGE1Q96RT6 745 aa16.55■□□□□ 0.24
DDX55-209ENST00000542286 DUSP9Q99956 384 aaKnown RBP16.55■□□□□ 0.24
DDX55-209ENST00000542286 TRIM9Q9C026 710 aa16.55■□□□□ 0.24
DDX55-209ENST00000542286 RSPH14Q9UHP6 348 aa16.55■□□□□ 0.24
DDX55-209ENST00000542286 LRRC41Q15345 812 aa16.55■□□□□ 0.24
DDX55-209ENST00000542286 CDC42EP5Q6NZY7 148 aa16.55■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms